FFCP PHASE1:Hg19::chr20:48746215..48746233,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:48746215..48746233,-
|short_description=p3@TMEM189-UBE2V1
|description=CAGE_peak_3_at_TMEM189-UBE2V1_5end
|association_with_transcript=-34bp_to_U39361_5en...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=387522 | |EntrezGene=387522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=33521 | |HGNC=33521 | ||
|TSSclassifier=strong | |||
|UniProt=Q13404 | |UniProt=Q13404 | ||
|association_with_transcript=-34bp_to_U39361_5end | |||
|cluster_id=chr20:48746215..48746233,- | |||
|description=CAGE_peak_3_at_TMEM189-UBE2V1_5end | |||
|id=chr20:48746215..48746233,- | |||
|ontology_enrichment_celltype=CL:0000860!2.96e-09!45;CL:0002057!1.41e-08!42;CL:0000066!2.68e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.15e-19;33!CL:0002057;3.15e-19;33!CL:0000473;9.70e-15;39!CL:0000234;9.70e-15;39!CL:0000576;6.88e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.97e-14,42;CL:0002057,1.97e-14,42;CL:0000473,7.75e-14,48;CL:0000234,7.75e-14,48;CL:0002194,4.28e-09,59;CL:0000576,4.28e-09,59;CL:0000040,4.28e-09,59;CL:0000559,4.28e-09,59;CL:0002009,1.66e-08,61;CL:0000839,3.26e-07,66;CL:0000557,5.54e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.89e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TMEM189-UBE2V1 | |||
}} | }} |
Latest revision as of 20:36, 16 September 2015
Short description: | p3@TMEM189-UBE2V1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM189-UBE2V1_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_U39361_5end |
EntrezGene: | TMEM189-UBE2V1 |
HGNC: | 33521 |
UniProt: | Q13404 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.97e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.97e-14 | 42 |
defensive cell | 7.75e-14 | 48 |
phagocyte | 7.75e-14 | 48 |
monopoietic cell | 4.28e-09 | 59 |
monocyte | 4.28e-09 | 59 |
monoblast | 4.28e-09 | 59 |
promonocyte | 4.28e-09 | 59 |
macrophage dendritic cell progenitor | 1.66e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.26e-07 | 66 |
granulocyte monocyte progenitor cell | 5.54e-07 | 67 |