FFCP PHASE1:Hg19::chr8:119964408..119964423,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4982 | |EntrezGene=4982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11909 | |HGNC=11909 | ||
|TSSclassifier=strong | |||
|UniProt=O00300 | |UniProt=O00300 | ||
|association_with_transcript=15bp_to_ENST00000297350_5end | |association_with_transcript=15bp_to_ENST00000297350_5end | ||
|cluster_id=chr8:119964408..119964423,- | |||
|description=CAGE_peak_4_at_TNFRSF11B_5end | |description=CAGE_peak_4_at_TNFRSF11B_5end | ||
|id=chr8:119964408..119964423,- | |id=chr8:119964408..119964423,- | ||
|ontology_enrichment_celltype=CL:0000055!4.63e-15!180;CL:0000057!8.94e-15!75 | |ontology_enrichment_celltype=CL:0000055!4.63e-15!180;CL:0000057!8.94e-15!75 | ||
|ontology_enrichment_celltype_v019=CL:0000499;1.30e-10;28!CL:0002559;9.95e-09;5!CL:0000153;7.56e-07;9!CL:0000447;7.56e-07;9 | |ontology_enrichment_celltype_v019=CL:0000499;1.30e-10;28!CL:0002559;9.95e-09;5!CL:0000153;7.56e-07;9!CL:0000447;7.56e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.80e-18,76;CL:0000499,9.77e-11,28;CL:0002559,7.58e-09,5;CL:0000153,5.88e-07,9;CL:0000447,5.88e-07,9;CL:0002620,7.91e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.50e-08;4!UBERON:0007284;9.50e-08;4 | |ontology_enrichment_development_v019=UBERON:0005062;9.50e-08;4!UBERON:0007284;9.50e-08;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!6.52e-13!286;UBERON:0000475!1.34e-12!365;UBERON:0007023!3.10e-12!115;UBERON:0004111!2.07e-10!241;UBERON:0001017!1.17e-09!82;UBERON:0001049!3.94e-09!57;UBERON:0005068!3.94e-09!57;UBERON:0006241!3.94e-09!57;UBERON:0007135!3.94e-09!57;UBERON:0002616!4.00e-09!59;UBERON:0005743!4.35e-09!86;UBERON:0000025!5.51e-09!194;UBERON:0000467!1.99e-08!625;UBERON:0000480!2.62e-08!626;UBERON:0000955!2.70e-08!69;UBERON:0006238!2.70e-08!69;UBERON:0000468!6.55e-08!659;UBERON:0000033!8.70e-08!123;UBERON:0003075!1.27e-07!86;UBERON:0007284!1.27e-07!86;UBERON:0000062!1.33e-07!511;UBERON:0000073!1.68e-07!94;UBERON:0001016!1.68e-07!94;UBERON:0000483!2.93e-07!309;UBERON:0000481!3.75e-07!347;UBERON:0000119!4.47e-07!312;UBERON:0000153!6.56e-07!129;UBERON:0007811!6.56e-07!129 | |ontology_enrichment_uberon=UBERON:0000477!6.52e-13!286;UBERON:0000475!1.34e-12!365;UBERON:0007023!3.10e-12!115;UBERON:0004111!2.07e-10!241;UBERON:0001017!1.17e-09!82;UBERON:0001049!3.94e-09!57;UBERON:0005068!3.94e-09!57;UBERON:0006241!3.94e-09!57;UBERON:0007135!3.94e-09!57;UBERON:0002616!4.00e-09!59;UBERON:0005743!4.35e-09!86;UBERON:0000025!5.51e-09!194;UBERON:0000467!1.99e-08!625;UBERON:0000480!2.62e-08!626;UBERON:0000955!2.70e-08!69;UBERON:0006238!2.70e-08!69;UBERON:0000468!6.55e-08!659;UBERON:0000033!8.70e-08!123;UBERON:0003075!1.27e-07!86;UBERON:0007284!1.27e-07!86;UBERON:0000062!1.33e-07!511;UBERON:0000073!1.68e-07!94;UBERON:0001016!1.68e-07!94;UBERON:0000483!2.93e-07!309;UBERON:0000481!3.75e-07!347;UBERON:0000119!4.47e-07!312;UBERON:0000153!6.56e-07!129;UBERON:0007811!6.56e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;9.95e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0002073;9.95e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,7.58e-09,5;UBERON:0005086,7.58e-09,5;UBERON:0004797,2.05e-08,7;UBERON:0002097,6.99e-08,41;UBERON:0003102,1.96e-07,99;UBERON:0010314,6.47e-07,132 | |||
|phase1_expression=0.908391896352783,2.5692062866918,1.40954404095971,0,0.446961094427288,6.97870819280295,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0,0.61560529038394,0.408001382488506,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,3.2529523714611,1.50401373190767,6.80778639115871,0,1.45990461090791,0.378139268656271,0,0,0.392937226493138,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0,0,0,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0,7.9515512271251,0.886413581652058,1.72131935057184,3.15520282823695,1.41867352879343,1.68203280042692,0,0,0.622422070799533,0,0,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0,0,1.22492502752936,0.245668634623536,2.37649296704261,11.8800285728205,9.89067717114228,3.64064544775211,1.43723628363248,0.168336113954066,0.125118519871964,2.77064115484183,5.26773145057006,2.45190236639216,6.15976041517047,0,0.538168907066586,1.70845911054854,3.81477422087211,1.80054657650641,6.38925681278321,2.83404594050192,4.46680455195816,1.35021065793013,1.26668106709558,1.26216887122057,5.61504381718026,9.69876340912871,0.355009592516614,0.503760491138201,0.847802961552438,0,0,0,0,0,0,0,0,0,1.56449532329816,4.5026865673502,4.14404764057442,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,3.11980435583874,0,0.115930404975077,0.117408694235822,0.577465791044295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.205476322550383,1.07436577943937,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,1.47229790062968,0,0,4.78332981520856,7.31558854068363,9.93525214713788,16.751222343958,0.601892199455438,0,0,0,0,2.69339204851057,0.587403472388222,0,0,0,0,0,0,0.30239029332968,0.744323423456331,1.07423381301644,0.841980283299221,2.56278298511402,1.02341449813341,0.482561763430822,2.96836132889982,0,0.177561725313127,0,0,0,0,0,0,1.49258782613989,0.728364672026868,1.31124414959424,0,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0,0.215915916102139,3.08454505380579,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0.366277859273374,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.255679882248303,0,0,0,0,0,0.464845549297286,3.1481234683064,0,0.616067160352178,0,0,0.74129687641568,0.286249773483982,0,0.316379424718726,0.762520775695299,0,0.855877976067841,0.636406495851874,1.56989728039846,0.179872457583315,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0.731140468893853,0,0.818999468447914,0.848432591722276,1.13008116620243,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0.811641507850816,0,0,0.143411352204052,0,1.78335525740625,0,12.8775657531575,13.1717957183961,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0.333926115068718,0,0,9.56390343605135,0.276283915531148,0,0,0,1.86623752597084,0.269605053441981,0,0,0.197286811273867,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,1.76926815889959,0.591095237907095,1.31631238292384,0,0,0.461701551022782,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0.802577647298789,0.702793337176017,0,0,0,0.394584402849391,0,0.30607276163049,1.01098527405581,0,0.103688191397247,0.664653872707185,0,0,0,2.27687636823834,0,0.347119476670262,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0.19871461170299,0.253243183823515,0,0.480952921509202,1.28071796843612,1.39866726707491,0,0,0.171594997861965,0.14405479798815,0.49701014226173,0,0.407712618220842,0.313808538937,2.54995544090804,0,0,0.958337652243951,0,3.86788897277961,0,2.51354161145029,2.06244381610515,4.30723814746088,0.399358000997982,1.71690419254628,1.11585728720936,0.134366944973453,6.12509802022086,0,0,0,0,0.196854963029498,0,0,1.77064427945048,0.160753148465019,0.412618309791701,0,0,0,0.364497339948148,0,2.04894838977915,0.472091293214983,0,0.717149357331379,0.383830394638891,0.714695326373367,5.95882773328889,0,0,0,0,0,0,0,2.26624183040251,0.439656701034247,0,1.29282956361551,1.19009341568421,0,0,0.854299300541557,0.314408610199332,1.65695622138878,1.48849806543585,0,0,0,2.72008901684737,1.0027595760908,1.22538230705385,0.983617892129413,0.785270481251171,2.65820453990096,1.3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| ||
|short_description=p4@TNFRSF11B | |short_description=p4@TNFRSF11B | ||
}} | }} |
Latest revision as of 21:02, 15 September 2015
Short description: | p4@TNFRSF11B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNFRSF11B_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000297350_5end |
EntrezGene: | TNFRSF11B |
HGNC: | 11909 |
UniProt: | O00300 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.80e-18 | 76 |
stromal cell | 9.77e-11 | 28 |
hair follicle cell | 7.58e-09 | 5 |
GAG secreting cell | 5.88e-07 | 9 |
carbohydrate secreting cell | 5.88e-07 | 9 |
skin fibroblast | 7.91e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 7.58e-09 | 5 |
hair follicle placode | 7.58e-09 | 5 |
blood vessel layer | 2.05e-08 | 7 |
skin of body | 6.99e-08 | 41 |
surface structure | 1.96e-07 | 99 |
structure with developmental contribution from neural crest | 6.47e-07 | 132 |