FFCP PHASE1:Hg19::chr2:160853336..160853345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:160853336..160853345,- | |||
|coexpression_cluster_id=C30 | |coexpression_cluster_id=C30 | ||
|description=CAGE_peak_at_chr2:160853336..160853345,- | |description=CAGE_peak_at_chr2:160853336..160853345,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002615!8.44e-14!3;CL:0002561!5.05e-11!1 | |ontology_enrichment_celltype=CL:0002615!8.44e-14!3;CL:0002561!5.05e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002615;3.27e-23;3 | |ontology_enrichment_celltype_v019=CL:0002615;3.27e-23;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.27e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.87e-53;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.87e-53;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.69e-20!2;UBERON:0002046!2.21e-18!5;UBERON:0004117!2.21e-18!5;UBERON:0007689!2.21e-18!5;UBERON:0007123!2.21e-18!5;UBERON:0003091!2.21e-18!5;UBERON:0005933!5.05e-11!1;UBERON:0005942!5.05e-11!1;UBERON:0005932!5.05e-11!1;UBERON:0009722!1.20e-08!11;UBERON:0007690!1.20e-08!11;UBERON:0004457!1.19e-07!12;UBERON:0000042!1.19e-07!12;UBERON:0003688!2.45e-07!6;UBERON:0002358!2.45e-07!6;UBERON:0003684!2.45e-07!6;UBERON:0001178!2.45e-07!6 | |ontology_enrichment_uberon=UBERON:0000341!1.69e-20!2;UBERON:0002046!2.21e-18!5;UBERON:0004117!2.21e-18!5;UBERON:0007689!2.21e-18!5;UBERON:0007123!2.21e-18!5;UBERON:0003091!2.21e-18!5;UBERON:0005933!5.05e-11!1;UBERON:0005942!5.05e-11!1;UBERON:0005932!5.05e-11!1;UBERON:0009722!1.20e-08!11;UBERON:0007690!1.20e-08!11;UBERON:0004457!1.19e-07!12;UBERON:0000042!1.19e-07!12;UBERON:0003688!2.45e-07!6;UBERON:0002358!2.45e-07!6;UBERON:0003684!2.45e-07!6;UBERON:0001178!2.45e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.87e-53;5!UBERON:0003688;2.45e-12;6!UBERON:0002358;2.45e-12;6!UBERON:0003684;2.45e-12;6!UBERON:0001178;2.45e-12;6!UBERON:0004457;1.12e-08;9!UBERON:0000042;1.12e-08;9!UBERON:0002368;5.59e-08;33 | |ontology_enrichment_uberon_v019=UBERON:0002046;2.87e-53;5!UBERON:0003688;2.45e-12;6!UBERON:0002358;2.45e-12;6!UBERON:0003684;2.45e-12;6!UBERON:0001178;2.45e-12;6!UBERON:0004457;1.12e-08;9!UBERON:0000042;1.12e-08;9!UBERON:0002368;5.59e-08;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.87e-53,5;UBERON:0004117,2.87e-53,5;UBERON:0007689,2.87e-53,5;UBERON:0007123,2.87e-53,5;UBERON:0003091,2.87e-53,5;UBERON:0009722,5.49e-25,11;UBERON:0007690,5.49e-25,11;UBERON:0008814,9.05e-16,18;UBERON:0003688,2.45e-12,6;UBERON:0002358,2.45e-12,6;UBERON:0003684,2.45e-12,6;UBERON:0001178,2.45e-12,6;UBERON:0002368,1.14e-08,35;UBERON:0000949,5.58e-07,45;UBERON:0004457,7.92e-07,12;UBERON:0000042,7.92e-07,12 | |||
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|short_description=p@chr2:160853336..160853345,- | |short_description=p@chr2:160853336..160853345,- | ||
}} | }} |
Latest revision as of 01:49, 29 July 2015
Short description: | p@chr2:160853336..160853345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:160853336..160853345, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.87e-53 | 5 |
pharyngeal pouch | 2.87e-53 | 5 |
thyroid diverticulum | 2.87e-53 | 5 |
pharyngeal pouch 2 | 2.87e-53 | 5 |
thyroid primordium | 2.87e-53 | 5 |
entire pharyngeal arch endoderm | 5.49e-25 | 11 |
early pharyngeal endoderm | 5.49e-25 | 11 |
pharyngeal arch system | 9.05e-16 | 18 |
omentum | 2.45e-12 | 6 |
peritoneum | 2.45e-12 | 6 |
abdominal cavity | 2.45e-12 | 6 |
visceral peritoneum | 2.45e-12 | 6 |
endocrine gland | 1.14e-08 | 35 |
endocrine system | 5.58e-07 | 45 |
cavity lining | 7.92e-07 | 12 |
serous membrane | 7.92e-07 | 12 |