FFCP PHASE1:Hg19::chr6:10419750..10419757,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000464323_5end | |association_with_transcript=29bp_to_ENST00000464323_5end | ||
|cluster_id=chr6:10419750..10419757,- | |||
|coexpression_cluster_id=C4538 | |coexpression_cluster_id=C4538 | ||
|description=CAGE_peak_30_at_TFAP2A_5end | |description=CAGE_peak_30_at_TFAP2A_5end | ||
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|ontology_enrichment_celltype=CL:0002159!1.42e-17!13;CL:0000362!1.84e-13!8;CL:0000240!1.06e-12!6;CL:0000311!1.06e-12!6;CL:0000079!1.06e-12!6;CL:0000237!1.06e-12!6;CL:0000036!1.06e-12!6;CL:0000357!1.06e-12!6;CL:0000114!1.06e-12!6;CL:0000076!1.24e-10!62;CL:0000066!1.90e-10!254;CL:0000312!4.19e-10!5;CL:0002541!2.20e-09!3;CL:0000575!2.54e-07!2;CL:0000242!2.70e-07!2;CL:0000317!2.78e-07!2;CL:1000448!2.78e-07!2;CL:0002308!2.78e-07!2;CL:0002140!2.78e-07!2;CL:0002077!3.58e-07!33;CL:0002327!5.25e-07!4 | |ontology_enrichment_celltype=CL:0002159!1.42e-17!13;CL:0000362!1.84e-13!8;CL:0000240!1.06e-12!6;CL:0000311!1.06e-12!6;CL:0000079!1.06e-12!6;CL:0000237!1.06e-12!6;CL:0000036!1.06e-12!6;CL:0000357!1.06e-12!6;CL:0000114!1.06e-12!6;CL:0000076!1.24e-10!62;CL:0000066!1.90e-10!254;CL:0000312!4.19e-10!5;CL:0002541!2.20e-09!3;CL:0000575!2.54e-07!2;CL:0000242!2.70e-07!2;CL:0000317!2.78e-07!2;CL:1000448!2.78e-07!2;CL:0002308!2.78e-07!2;CL:0002140!2.78e-07!2;CL:0002077!3.58e-07!33;CL:0002327!5.25e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.90e-13;14!CL:0000317;1.82e-11;2!CL:1000448;1.82e-11;2!CL:0002308;1.82e-11;2!CL:0002140;1.82e-11;2!CL:0000123;3.34e-11;2!CL:0000575;3.34e-11;2!CL:1000415;3.34e-11;2!CL:0000242;3.34e-11;2!CL:0000362;7.40e-10;9!CL:0002541;6.78e-08;3 | |ontology_enrichment_celltype_v019=CL:0002159;1.90e-13;14!CL:0000317;1.82e-11;2!CL:1000448;1.82e-11;2!CL:0002308;1.82e-11;2!CL:0002140;1.82e-11;2!CL:0000123;3.34e-11;2!CL:0000575;3.34e-11;2!CL:1000415;3.34e-11;2!CL:0000242;3.34e-11;2!CL:0000362;7.40e-10;9!CL:0002541;6.78e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.07e-13,14;CL:0000317,1.82e-11,2;CL:1000448,1.82e-11,2;CL:0002308,1.82e-11,2;CL:0002140,1.82e-11,2;CL:0000575,3.02e-11,2;CL:1000415,3.35e-11,2;CL:0000242,4.52e-11,2;CL:0000362,8.46e-10,9;CL:0002541,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.08e-21;1 | |ontology_enrichment_development_v019=UBERON:0008425;2.08e-21;1 | ||
|ontology_enrichment_disease=DOID:1749!1.97e-14!14;DOID:305!2.48e-07!106;DOID:0050687!8.33e-07!143 | |ontology_enrichment_disease=DOID:1749!1.97e-14!14;DOID:305!2.48e-07!106;DOID:0050687!8.33e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002419;1.82e-11;2!UBERON:0007771;1.82e-11;2!UBERON:0003297;1.82e-11;2!UBERON:0001821;1.82e-11;2!UBERON:0003487;1.82e-11;2!UBERON:0001820;1.82e-11;2!UBERON:0005631;7.36e-09;10!UBERON:0000158;7.36e-09;10!UBERON:0002110;6.78e-08;3!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0002419;1.82e-11;2!UBERON:0007771;1.82e-11;2!UBERON:0003297;1.82e-11;2!UBERON:0001821;1.82e-11;2!UBERON:0003487;1.82e-11;2!UBERON:0001820;1.82e-11;2!UBERON:0005631;7.36e-09;10!UBERON:0000158;7.36e-09;10!UBERON:0002110;6.78e-08;3!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.82e-11,2;UBERON:0007771,1.82e-11,2;UBERON:0003297,1.82e-11,2;UBERON:0001821,1.82e-11,2;UBERON:0003487,1.82e-11,2;UBERON:0001820,1.82e-11,2;UBERON:0005089,1.82e-11,2;UBERON:0005088,1.82e-11,2;UBERON:0002110,6.78e-08,3;UBERON:0006242,6.78e-08,3;UBERON:0000920,7.76e-08,3 | |||
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| ||
|short_description=p30@TFAP2A | |short_description=p30@TFAP2A | ||
}} | }} |
Latest revision as of 13:07, 19 September 2015
Short description: | p30@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_TFAP2A_5end |
Coexpression cluster: | C4538_breast_placenta_malignant_choriocarcinoma_Sebocyte_glassy_lung |
Association with transcript: | 29bp_to_ENST00000464323_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.07e-13 | 14 |
sebum secreting cell | 1.82e-11 | 2 |
epithelial cell of sweat gland | 1.82e-11 | 2 |
epithelial cell of skin gland | 1.82e-11 | 2 |
acinar cell of sebaceous gland | 1.82e-11 | 2 |
corneal epithelial cell | 3.02e-11 | 2 |
epithelial cell of gall bladder | 3.35e-11 | 2 |
Merkel cell | 4.52e-11 | 2 |
epidermal cell | 8.46e-10 | 9 |
chorionic membrane mesenchymal stem cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.82e-11 | 2 |
epidermis gland | 1.82e-11 | 2 |
gland of integumental system | 1.82e-11 | 2 |
sebaceous gland | 1.82e-11 | 2 |
skin sebaceous gland | 1.82e-11 | 2 |
sweat gland | 1.82e-11 | 2 |
sweat gland placode | 1.82e-11 | 2 |
sebaceous gland placode | 1.82e-11 | 2 |
gallbladder | 6.78e-08 | 3 |
gall bladder primordium | 6.78e-08 | 3 |
egg chorion | 7.76e-08 | 3 |