FFCP PHASE1:Hg19::chr7:106264559..106264573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:106264559..106264573,+ | |||
|coexpression_cluster_id=C4639 | |coexpression_cluster_id=C4639 | ||
|description=CAGE_peak_at_chr7:106264559..106264573,+ | |description=CAGE_peak_at_chr7:106264559..106264573,+ | ||
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|ontology_enrichment_celltype=CL:0002620!4.61e-16!23;CL:0000057!5.81e-14!75;CL:0002334!1.45e-13!12;CL:0000136!8.18e-13!15;CL:0000197!1.44e-09!6;CL:0000098!1.44e-09!6;CL:0002167!1.44e-09!6;CL:0000055!2.57e-09!180;CL:0002580!7.09e-08!3;CL:0002579!7.58e-08!3;CL:0002622!5.23e-07!3 | |ontology_enrichment_celltype=CL:0002620!4.61e-16!23;CL:0000057!5.81e-14!75;CL:0002334!1.45e-13!12;CL:0000136!8.18e-13!15;CL:0000197!1.44e-09!6;CL:0000098!1.44e-09!6;CL:0002167!1.44e-09!6;CL:0000055!2.57e-09!180;CL:0002580!7.09e-08!3;CL:0002579!7.58e-08!3;CL:0002622!5.23e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.10e-18;23!CL:0002580;2.80e-18;3!CL:0002579;6.32e-18;3!CL:0002334;5.83e-17;12!CL:0000197;5.76e-16;6!CL:0000098;5.76e-16;6!CL:0002167;5.76e-16;6!CL:0000136;1.98e-15;13!CL:0000138;2.03e-15;6!CL:0002617;9.24e-13;2!CL:0000153;2.49e-10;9!CL:0000447;2.49e-10;9!CL:0002615;1.14e-08;3!CL:0000057;5.58e-07;73!CL:0000222;6.12e-07;1!CL:0002568;6.12e-07;1!CL:0002616;6.12e-07;1 | |ontology_enrichment_celltype_v019=CL:0002620;1.10e-18;23!CL:0002580;2.80e-18;3!CL:0002579;6.32e-18;3!CL:0002334;5.83e-17;12!CL:0000197;5.76e-16;6!CL:0000098;5.76e-16;6!CL:0002167;5.76e-16;6!CL:0000136;1.98e-15;13!CL:0000138;2.03e-15;6!CL:0002617;9.24e-13;2!CL:0000153;2.49e-10;9!CL:0000447;2.49e-10;9!CL:0002615;1.14e-08;3!CL:0000057;5.58e-07;73!CL:0000222;6.12e-07;1!CL:0002568;6.12e-07;1!CL:0002616;6.12e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.35e-19,23;CL:0002580,3.77e-18,3;CL:0002579,4.49e-18,3;CL:0002334,5.69e-17,12;CL:0000197,2.77e-16,6;CL:0000098,2.77e-16,6;CL:0002167,2.77e-16,6;CL:0000057,4.78e-16,76;CL:0000058,3.08e-15,6;CL:0000138,3.08e-15,6;CL:0000136,3.29e-13,15;CL:0002617,1.01e-12,2;CL:0000153,3.27e-10,9;CL:0000447,3.27e-10,9;CL:0002615,1.68e-08,3;CL:0002616,4.57e-07,1;CL:0000134,4.90e-07,354;CL:0002320,8.61e-07,361;CL:0002568,9.18e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!1.19e-11!5;DOID:450!1.19e-11!5;DOID:66!1.19e-11!5;DOID:423!1.19e-11!5;DOID:0080000!1.19e-11!5;DOID:11722!1.19e-11!5 | |ontology_enrichment_disease=DOID:17!1.19e-11!5;DOID:450!1.19e-11!5;DOID:66!1.19e-11!5;DOID:423!1.19e-11!5;DOID:0080000!1.19e-11!5;DOID:11722!1.19e-11!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.46e-18;5!DOID:450;1.46e-18;5!DOID:66;1.46e-18;5!DOID:423;1.46e-18;5!DOID:0080000;1.46e-18;5!DOID:11722;1.46e-18;5!DOID:2513;1.69e-07;1 | |ontology_enrichment_disease_v019=DOID:17;1.46e-18;5!DOID:450;1.46e-18;5!DOID:66;1.46e-18;5!DOID:423;1.46e-18;5!DOID:0080000;1.46e-18;5!DOID:11722;1.46e-18;5!DOID:2513;1.69e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.40e-18,5;DOID:450,1.40e-18,5;DOID:66,1.40e-18,5;DOID:423,1.40e-18,5;DOID:0080000,1.40e-18,5;DOID:11722,1.40e-18,5;DOID:2513,1.65e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!9.36e-13!45;UBERON:0002416!9.36e-13!45;UBERON:0003102!8.51e-12!95;UBERON:0002097!9.61e-12!40;UBERON:0003688!8.91e-10!6;UBERON:0002358!8.91e-10!6;UBERON:0003684!8.91e-10!6;UBERON:0001178!8.91e-10!6 | |ontology_enrichment_uberon=UBERON:0002199!9.36e-13!45;UBERON:0002416!9.36e-13!45;UBERON:0003102!8.51e-12!95;UBERON:0002097!9.61e-12!40;UBERON:0003688!8.91e-10!6;UBERON:0002358!8.91e-10!6;UBERON:0003684!8.91e-10!6;UBERON:0001178!8.91e-10!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.57e-24;6!UBERON:0002358;6.57e-24;6!UBERON:0003684;6.57e-24;6!UBERON:0001178;6.57e-24;6!UBERON:0004457;6.88e-16;9!UBERON:0000042;6.88e-16;9!UBERON:0000310;1.52e-14;10!UBERON:0001443;3.34e-13;11!UBERON:0002199;3.30e-09;46!UBERON:0002416;3.30e-09;46!UBERON:0002097;4.62e-09;41!UBERON:0003102;9.00e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0003688;6.57e-24;6!UBERON:0002358;6.57e-24;6!UBERON:0003684;6.57e-24;6!UBERON:0001178;6.57e-24;6!UBERON:0004457;6.88e-16;9!UBERON:0000042;6.88e-16;9!UBERON:0000310;1.52e-14;10!UBERON:0001443;3.34e-13;11!UBERON:0002199;3.30e-09;46!UBERON:0002416;3.30e-09;46!UBERON:0002097;4.62e-09;41!UBERON:0003102;9.00e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.00e-24,6;UBERON:0002358,8.00e-24,6;UBERON:0003684,8.00e-24,6;UBERON:0001178,8.00e-24,6;UBERON:0000310,1.83e-14,10;UBERON:0001443,3.96e-13,11;UBERON:0002199,4.31e-13,46;UBERON:0002416,4.31e-13,46;UBERON:0002097,2.41e-12,41;UBERON:0004457,7.97e-12,12;UBERON:0000042,7.97e-12,12;UBERON:0003102,3.07e-07,99 | |||
|phase1_expression=4.36028110249336,1.2846031433459,2.81908808191942,1.0007329835313,0,1.74467704820074,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.01392563272577,1.5905718941022,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,2.14541457059314,0.300476117813194,0,1.25572744982203,1.2813443329114,3.60284231971255,1.80054657650641,0.824420233907511,0.772921620136887,0.37223371266318,0.675105328965065,0.68205903612839,1.51460264546469,2.94559675655358,0,2.4850671476163,1.30977727695932,1.86516651541536,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,9.56665963041713,8.56459146226377,1.89242898040722,1.99140405487612,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,3.2254015016441,2.91577749247319,1.12264037773229,1.79394808957981,3.07024349440022,1.44768529029247,0,0,0.355123450626254,0.164254312027618,0.519254429183621,0,0,0,0,0.459257792658427,1.45672934405374,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,4.97663340258892,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,2.63794020620548,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,1.26184898228651,0,0,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p@chr7:106264559..106264573,+ | |short_description=p@chr7:106264559..106264573,+ | ||
}} | }} |
Latest revision as of 04:48, 31 July 2015
Short description: | p@chr7:106264559..106264573, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:106264559..106264573, + |
Coexpression cluster: | C4639_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_Neurons_mesodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.35e-19 | 23 |
preadipocyte of the breast | 3.77e-18 | 3 |
omentum preadipocyte | 4.49e-18 | 3 |
preadipocyte | 5.69e-17 | 12 |
receptor cell | 2.77e-16 | 6 |
sensory epithelial cell | 2.77e-16 | 6 |
olfactory epithelial cell | 2.77e-16 | 6 |
fibroblast | 4.78e-16 | 76 |
chondroblast | 3.08e-15 | 6 |
chondrocyte | 3.08e-15 | 6 |
fat cell | 3.29e-13 | 15 |
adipocyte of breast | 1.01e-12 | 2 |
GAG secreting cell | 3.27e-10 | 9 |
carbohydrate secreting cell | 3.27e-10 | 9 |
adipocyte of omentum tissue | 1.68e-08 | 3 |
perirenal adipocyte cell | 4.57e-07 | 1 |
mesenchymal cell | 4.90e-07 | 354 |
connective tissue cell | 8.61e-07 | 361 |
mesenchymal stem cell of Wharton's jelly | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.00e-24 | 6 |
peritoneum | 8.00e-24 | 6 |
abdominal cavity | 8.00e-24 | 6 |
visceral peritoneum | 8.00e-24 | 6 |
breast | 1.83e-14 | 10 |
chest | 3.96e-13 | 11 |
integument | 4.31e-13 | 46 |
integumental system | 4.31e-13 | 46 |
skin of body | 2.41e-12 | 41 |
cavity lining | 7.97e-12 | 12 |
serous membrane | 7.97e-12 | 12 |
surface structure | 3.07e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.40e-18 | 5 |
myotonic disease | 1.40e-18 | 5 |
muscle tissue disease | 1.40e-18 | 5 |
myopathy | 1.40e-18 | 5 |
muscular disease | 1.40e-18 | 5 |
myotonic dystrophy | 1.40e-18 | 5 |
basal cell carcinoma | 1.65e-07 | 1 |