FFCP PHASE1:Hg19::chr6:168841898..168841909,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64094 | |EntrezGene=64094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20323 | |HGNC=20323 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3U7,A8MSZ2 | |UniProt=Q9H3U7,A8MSZ2 | ||
|association_with_transcript=67bp_to_ENST00000354536,ENST00000356284,ENST00000366793,NM_001166412,NM_022138_5end | |association_with_transcript=67bp_to_ENST00000354536,ENST00000356284,ENST00000366793,NM_001166412,NM_022138_5end | ||
|cluster_id=chr6:168841898..168841909,+ | |||
|coexpression_cluster_id=C1329 | |coexpression_cluster_id=C1329 | ||
|description=CAGE_peak_3_at_SMOC2_5end | |description=CAGE_peak_3_at_SMOC2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!2.85e-07!15 | |ontology_enrichment_celltype=CL:0000136!2.85e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.37e-11;13!CL:0002615;3.41e-08;3 | |ontology_enrichment_celltype_v019=CL:0000136;1.37e-11;13!CL:0002615;3.41e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.10e-09,15;CL:0002615,4.19e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.73e-10;65!UBERON:0005062;6.35e-07;4!UBERON:0007284;6.35e-07;4 | |ontology_enrichment_development_v019=UBERON:0006603;1.73e-10;65!UBERON:0005062;6.35e-07;4!UBERON:0007284;6.35e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.37e-57!115;UBERON:0001049!6.73e-15!57;UBERON:0005068!6.73e-15!57;UBERON:0006241!6.73e-15!57;UBERON:0007135!6.73e-15!57;UBERON:0001017!3.56e-13!82;UBERON:0005743!4.58e-13!86;UBERON:0002616!6.44e-13!59;UBERON:0003075!1.71e-12!86;UBERON:0007284!1.71e-12!86;UBERON:0000073!2.64e-12!94;UBERON:0001016!2.64e-12!94;UBERON:0002346!3.49e-12!90;UBERON:0002020!4.95e-12!34;UBERON:0003528!4.95e-12!34;UBERON:0001893!7.66e-12!34;UBERON:0002791!3.27e-11!33;UBERON:0000955!4.53e-11!69;UBERON:0006238!4.53e-11!69;UBERON:0003080!1.14e-10!42;UBERON:0001869!1.27e-10!32;UBERON:0002780!8.14e-10!41;UBERON:0001890!8.14e-10!41;UBERON:0006240!8.14e-10!41;UBERON:0002298!1.04e-08!8;UBERON:0000064!1.56e-08!219;UBERON:0002619!2.27e-08!22;UBERON:0001950!3.01e-08!20;UBERON:0002308!2.29e-07!9;UBERON:0000125!2.29e-07!9;UBERON:0000956!5.84e-07!25;UBERON:0000203!5.84e-07!25;UBERON:0000153!6.45e-07!129;UBERON:0007811!6.45e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!5.37e-57!115;UBERON:0001049!6.73e-15!57;UBERON:0005068!6.73e-15!57;UBERON:0006241!6.73e-15!57;UBERON:0007135!6.73e-15!57;UBERON:0001017!3.56e-13!82;UBERON:0005743!4.58e-13!86;UBERON:0002616!6.44e-13!59;UBERON:0003075!1.71e-12!86;UBERON:0007284!1.71e-12!86;UBERON:0000073!2.64e-12!94;UBERON:0001016!2.64e-12!94;UBERON:0002346!3.49e-12!90;UBERON:0002020!4.95e-12!34;UBERON:0003528!4.95e-12!34;UBERON:0001893!7.66e-12!34;UBERON:0002791!3.27e-11!33;UBERON:0000955!4.53e-11!69;UBERON:0006238!4.53e-11!69;UBERON:0003080!1.14e-10!42;UBERON:0001869!1.27e-10!32;UBERON:0002780!8.14e-10!41;UBERON:0001890!8.14e-10!41;UBERON:0006240!8.14e-10!41;UBERON:0002298!1.04e-08!8;UBERON:0000064!1.56e-08!219;UBERON:0002619!2.27e-08!22;UBERON:0001950!3.01e-08!20;UBERON:0002308!2.29e-07!9;UBERON:0000125!2.29e-07!9;UBERON:0000956!5.84e-07!25;UBERON:0000203!5.84e-07!25;UBERON:0000153!6.45e-07!129;UBERON:0007811!6.45e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.97e-09;3!UBERON:0000946;3.97e-09;3!UBERON:0004151;5.28e-09;3!UBERON:0006947;2.15e-08;3!UBERON:0004054;2.15e-08;3!UBERON:0003135;3.81e-08;11!UBERON:0007023;6.19e-08;114 | |ontology_enrichment_uberon_v019=UBERON:0003978;3.97e-09;3!UBERON:0000946;3.97e-09;3!UBERON:0004151;5.28e-09;3!UBERON:0006947;2.15e-08;3!UBERON:0004054;2.15e-08;3!UBERON:0003135;3.81e-08;11!UBERON:0007023;6.19e-08;114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.63e-32,114;UBERON:0003978,4.88e-09,3;UBERON:0009751,4.88e-09,3;UBERON:0000946,4.88e-09,3;UBERON:0002523,4.88e-09,3;UBERON:0005983,4.88e-09,3;UBERON:0002165,4.88e-09,3;UBERON:0002062,4.88e-09,3;UBERON:0007280,4.88e-09,3;UBERON:0004151,5.43e-09,3;UBERON:0006947,2.10e-08,3;UBERON:0004054,2.10e-08,3;UBERON:0003135,3.30e-08,11 | |||
|phase1_expression=3.27021082687002,4.06790995392868,1.26858963686374,3.00219895059391,1.34088328328186,2.61701557230111,0,0,2.08948502559871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.869079113764942,0.795285947051099,6.8128881842369,0,0,0,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95153871551882,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45257662059956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,34.4699019674351,1.93398740871803,0,0,0,0,0,0,0,7.39825542277002,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0,5.79999660347835,0,0,0,0.344743373241465,0,0,0,0.723578631752448,0,0.110579259931225,0.295547618953547,1.31631238292384,0,0,8.84927972793666,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,1.99052386215701,1.23840590304675,3.66618086960175,0,0,0,0.134802265961354,8.82835412028668,0,0,0,0,1.18375320854817,3.62972148145992,0,3.85438135733777,0,0,0,0,0,0,0,0,0.173559738335131,0,0,7.33852006616527,0,0,0,0,2.90967049465258,0,4.97157629717171,0,0,0.50648636764703,0,0,12.5937266896218,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,3.35138881526705,12.3746628966309,2.15361907373044,0.599037001496973,0.429226048136571,1.33902874465124,1.20930250476107,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0.364497339948148,0,0.551639951094387,0.996637174564964,0,0,0,6.4322579373603,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,1.60181118851542,0.157204305099666,1.24271716604159,0.992332043623902,0,0,0,1.08803560673895,0,0.306345576763462,0.983617892129413,0.785270481251171,0.886068179966986,0.122026264901963,0.3755727921195,0.573409195690071,0.887432412294818,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0.371807292777007,0,0,0,0,0,0,1.15612605173627,1.41696576325585,0,0,0.252071696221718,0.414943514785307,0.645902582527404,1.42769420259154,0,0,0,0,0,0,1.39241355481392,8.42355677511681,0,3.90757005616546,0,0,0,0.337687923091973,0,0,0.380494861163441,0.546974809018219,0,2.97726707033577,0,0,0,0,0,0,0.532214220975833,0,0,0.40781839786099,0.263091094251396,0,0,4.94506484958238,1.25692471932802,0,2.73947616152849,0,0,9.50638037549529,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0.223710863595585,0,0,0,1.7452677165562,5.799072156691,2.4285549652957,2.33939463462106,0,0.118920090777569,0.33883824611688,0,1.35866559210006,1.15761237161917,0.437119121007915,1.41095188908457,21.3279039925898,0.235676547101626,0.196308467114945,0,1.2679671827502,0,0.187967835959707,0.386747327841463,0,0,0,0,13.1460549884373,0.917458566809082,0.430018749454354,0,0.203974470572744,0,3.1741610430924,0,2.31087814315709,0.865253124247578,0,0.109265571963696,0,0,0,0,0,6.36541065033211,2.67964130156179,0,0.620597975171371,0.852935927603924,2.3806443146374,0,0.0620747142958579,0,1.65482611523229,1.0105859447911,1.52401723527873,4.10679961302337,0.606168477131288,3.29922144806311,4.32458463509817,0,0,0,0,7.03922827210363,5.50086498822899,11.3930929928407,2.66302709674205,2.21401172950129,0 | |phase1_expression=3.27021082687002,4.06790995392868,1.26858963686374,3.00219895059391,1.34088328328186,2.61701557230111,0,0,2.08948502559871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.869079113764942,0.795285947051099,6.8128881842369,0,0,0,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95153871551882,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45257662059956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,34.4699019674351,1.93398740871803,0,0,0,0,0,0,0,7.39825542277002,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0,5.79999660347835,0,0,0,0.344743373241465,0,0,0,0.723578631752448,0,0.110579259931225,0.295547618953547,1.31631238292384,0,0,8.84927972793666,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,1.99052386215701,1.23840590304675,3.66618086960175,0,0,0,0.134802265961354,8.82835412028668,0,0,0,0,1.18375320854817,3.62972148145992,0,3.85438135733777,0,0,0,0,0,0,0,0,0.173559738335131,0,0,7.33852006616527,0,0,0,0,2.90967049465258,0,4.97157629717171,0,0,0.50648636764703,0,0,12.5937266896218,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,3.35138881526705,12.3746628966309,2.15361907373044,0.599037001496973,0.429226048136571,1.33902874465124,1.20930250476107,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0.364497339948148,0,0.551639951094387,0.996637174564964,0,0,0,6.4322579373603,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,1.60181118851542,0.157204305099666,1.24271716604159,0.992332043623902,0,0,0,1.08803560673895,0,0.306345576763462,0.983617892129413,0.785270481251171,0.886068179966986,0.122026264901963,0.3755727921195,0.573409195690071,0.887432412294818,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0.371807292777007,0,0,0,0,0,0,1.15612605173627,1.41696576325585,0,0,0.252071696221718,0.414943514785307,0.645902582527404,1.42769420259154,0,0,0,0,0,0,1.39241355481392,8.42355677511681,0,3.90757005616546,0,0,0,0.337687923091973,0,0,0.380494861163441,0.546974809018219,0,2.97726707033577,0,0,0,0,0,0,0.532214220975833,0,0,0.40781839786099,0.263091094251396,0,0,4.94506484958238,1.25692471932802,0,2.73947616152849,0,0,9.50638037549529,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0.223710863595585,0,0,0,1.7452677165562,5.799072156691,2.4285549652957,2.33939463462106,0,0.118920090777569,0.33883824611688,0,1.35866559210006,1.15761237161917,0.437119121007915,1.41095188908457,21.3279039925898,0.235676547101626,0.196308467114945,0,1.2679671827502,0,0.187967835959707,0.386747327841463,0,0,0,0,13.1460549884373,0.917458566809082,0.430018749454354,0,0.203974470572744,0,3.1741610430924,0,2.31087814315709,0.865253124247578,0,0.109265571963696,0,0,0,0,0,6.36541065033211,2.67964130156179,0,0.620597975171371,0.852935927603924,2.3806443146374,0,0.0620747142958579,0,1.65482611523229,1.0105859447911,1.52401723527873,4.10679961302337,0.606168477131288,3.29922144806311,4.32458463509817,0,0,0,0,7.03922827210363,5.50086498822899,11.3930929928407,2.66302709674205,2.21401172950129,0 | ||
|short_description=p3@SMOC2 | |short_description=p3@SMOC2 | ||
}} | }} |
Latest revision as of 22:28, 16 September 2015
Short description: | p3@SMOC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMOC2_5end |
Coexpression cluster: | C1329_aorta_retina_uterus_smooth_gall_heart_diaphragm |
Association with transcript: | 67bp_to_ENST00000354536, ENST00000356284, ENST00000366793, NM_001166412, NM_022138_5end |
EntrezGene: | SMOC2 |
HGNC: | 20323 |
UniProt: | Q9H3U7A8MSZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.10e-09 | 15 |
adipocyte of omentum tissue | 4.19e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.63e-32 | 114 |
valve | 4.88e-09 | 3 |
cardiac mesenchyme | 4.88e-09 | 3 |
cardial valve | 4.88e-09 | 3 |
tunica intima | 4.88e-09 | 3 |
heart layer | 4.88e-09 | 3 |
endocardium | 4.88e-09 | 3 |
endocardial cushion | 4.88e-09 | 3 |
presumptive endocardium | 4.88e-09 | 3 |
cardiac chamber | 5.43e-09 | 3 |
male genital duct | 2.10e-08 | 3 |
internal male genitalia | 2.10e-08 | 3 |
male reproductive organ | 3.30e-08 | 11 |