FFCP PHASE1:Hg19::chr11:16916978..16916996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:16916978..16916996,- | |||
|coexpression_cluster_id=C397 | |coexpression_cluster_id=C397 | ||
|description=CAGE_peak_at_chr11:16916978..16916996,- | |description=CAGE_peak_at_chr11:16916978..16916996,- | ||
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|ontology_enrichment_celltype=CL:0000159!3.68e-10!2;CL:0002149!4.71e-08!6;CL:0002255!4.71e-08!6;CL:0000239!3.04e-07!3;CL:1000615!3.04e-07!3;CL:0002306!3.04e-07!3 | |ontology_enrichment_celltype=CL:0000159!3.68e-10!2;CL:0002149!4.71e-08!6;CL:0002255!4.71e-08!6;CL:0000239!3.04e-07!3;CL:1000615!3.04e-07!3;CL:0002306!3.04e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002149;8.63e-43;6!CL:0002255;8.63e-43;6!CL:1000507;2.58e-12;10!CL:1000494;2.58e-12;10!CL:0000239;1.04e-10;3!CL:1000615;1.04e-10;3!CL:0002306;1.04e-10;3!CL:0002681;1.99e-10;12!CL:0002584;1.99e-10;12!CL:0000499;8.29e-10;28!CL:1000449;1.56e-08;15!CL:1000497;1.23e-07;17!CL:0002518;1.23e-07;17 | |ontology_enrichment_celltype_v019=CL:0002149;8.63e-43;6!CL:0002255;8.63e-43;6!CL:1000507;2.58e-12;10!CL:1000494;2.58e-12;10!CL:0000239;1.04e-10;3!CL:1000615;1.04e-10;3!CL:0002306;1.04e-10;3!CL:0002681;1.99e-10;12!CL:0002584;1.99e-10;12!CL:0000499;8.29e-10;28!CL:1000449;1.56e-08;15!CL:1000497;1.23e-07;17!CL:0002518;1.23e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,6.48e-43,6;CL:0002255,6.48e-43,6;CL:1000507,2.81e-12,10;CL:1000494,2.81e-12,10;CL:0000239,1.20e-10,3;CL:1000615,1.20e-10,3;CL:0002306,1.20e-10,3;CL:0002681,2.13e-10,12;CL:0002584,2.13e-10,12;CL:0000499,7.81e-10,28;CL:1000449,1.65e-08,15;CL:1000497,1.29e-07,17;CL:0002518,1.29e-07,17;CL:0002076,9.05e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.66e-26;10 | |ontology_enrichment_development_v019=UBERON:0005795;4.66e-26;10 | ||
|ontology_enrichment_disease=DOID:120!2.04e-15!27;DOID:193!3.20e-14!29;DOID:3001!4.71e-08!6;DOID:2394!1.05e-07!14 | |ontology_enrichment_disease=DOID:120!2.04e-15!27;DOID:193!3.20e-14!29;DOID:3001!4.71e-08!6;DOID:2394!1.05e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3001;8.63e-43;6!DOID:299;6.69e-11;25!DOID:120;3.81e-10;27!DOID:193;1.71e-09;29 | |ontology_enrichment_disease_v019=DOID:3001;8.63e-43;6!DOID:299;6.69e-11;25!DOID:120;3.81e-10;27!DOID:193;1.71e-09;29 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,6.48e-43,6;DOID:299,6.26e-11,25;DOID:120,3.58e-10,27;DOID:193,1.61e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0006853!3.04e-07!3;UBERON:0007685!3.04e-07!3;UBERON:0004134!3.04e-07!3;UBERON:0003134!8.80e-07!37;UBERON:0000474!8.80e-07!37 | |ontology_enrichment_uberon=UBERON:0006853!3.04e-07!3;UBERON:0007685!3.04e-07!3;UBERON:0004134!3.04e-07!3;UBERON:0003134!8.80e-07!37;UBERON:0000474!8.80e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.73e-29;1!UBERON:0000995;1.12e-15;17!UBERON:0003975;7.52e-15;18!UBERON:0004175;7.73e-13;21!UBERON:0004211;2.58e-12;10!UBERON:0009773;2.58e-12;10!UBERON:0001231;2.58e-12;10!UBERON:0004810;2.58e-12;10!UBERON:0006853;1.04e-10;3!UBERON:0007685;1.04e-10;3!UBERON:0004134;1.04e-10;3!UBERON:0001225;1.99e-10;12!UBERON:0008987;1.99e-10;12!UBERON:0001851;1.56e-08;15!UBERON:0006555;1.56e-08;15!UBERON:0000353;1.56e-08;15!UBERON:0004819;1.56e-08;15!UBERON:0001285;1.56e-08;15!UBERON:0007684;1.56e-08;15!UBERON:0003134;2.67e-08;33!UBERON:0000474;9.31e-08;37 | |ontology_enrichment_uberon_v019=UBERON:0007195;2.73e-29;1!UBERON:0000995;1.12e-15;17!UBERON:0003975;7.52e-15;18!UBERON:0004175;7.73e-13;21!UBERON:0004211;2.58e-12;10!UBERON:0009773;2.58e-12;10!UBERON:0001231;2.58e-12;10!UBERON:0004810;2.58e-12;10!UBERON:0006853;1.04e-10;3!UBERON:0007685;1.04e-10;3!UBERON:0004134;1.04e-10;3!UBERON:0001225;1.99e-10;12!UBERON:0008987;1.99e-10;12!UBERON:0001851;1.56e-08;15!UBERON:0006555;1.56e-08;15!UBERON:0000353;1.56e-08;15!UBERON:0004819;1.56e-08;15!UBERON:0001285;1.56e-08;15!UBERON:0007684;1.56e-08;15!UBERON:0003134;2.67e-08;33!UBERON:0000474;9.31e-08;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.16e-29,1;UBERON:0000995,7.13e-13,21;UBERON:0005795,2.54e-12,22;UBERON:0003975,2.54e-12,22;UBERON:0004810,2.81e-12,10;UBERON:0004175,6.26e-11,25;UBERON:0006853,1.20e-10,3;UBERON:0007685,1.20e-10,3;UBERON:0004134,1.20e-10,3;UBERON:0001225,2.13e-10,12;UBERON:0008987,2.13e-10,12;UBERON:0001851,1.65e-08,15;UBERON:0004211,1.65e-08,15;UBERON:0009773,1.65e-08,15;UBERON:0000353,1.65e-08,15;UBERON:0001231,1.65e-08,15;UBERON:0001285,1.65e-08,15;UBERON:0007684,1.65e-08,15;UBERON:0004208,1.65e-08,15;UBERON:0006555,4.91e-08,16;UBERON:0004819,4.91e-08,16;UBERON:0003134,1.33e-07,37;UBERON:0000474,1.33e-07,37;UBERON:0003100,6.40e-07,41 | |||
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|short_description=p@chr11:16916978..16916996,- | |short_description=p@chr11:16916978..16916996,- | ||
}} | }} |
Latest revision as of 20:24, 23 July 2015
Short description: | p@chr11:16916978..16916996, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:16916978..16916996, - |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 6.48e-43 | 6 |
stromal cell of endometrium | 6.48e-43 | 6 |
kidney tubule cell | 2.81e-12 | 10 |
nephron tubule epithelial cell | 2.81e-12 | 10 |
brush border epithelial cell | 1.20e-10 | 3 |
kidney cortex tubule cell | 1.20e-10 | 3 |
epithelial cell of proximal tubule | 1.20e-10 | 3 |
kidney cortical cell | 2.13e-10 | 12 |
renal cortical epithelial cell | 2.13e-10 | 12 |
stromal cell | 7.81e-10 | 28 |
epithelial cell of nephron | 1.65e-08 | 15 |
kidney cell | 1.29e-07 | 17 |
kidney epithelial cell | 1.29e-07 | 17 |
endo-epithelial cell | 9.05e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.16e-29 | 1 |
uterus | 7.13e-13 | 21 |
embryonic uterus | 2.54e-12 | 22 |
internal female genitalia | 2.54e-12 | 22 |
nephron tubule epithelium | 2.81e-12 | 10 |
internal genitalia | 6.26e-11 | 25 |
renal cortex tubule | 1.20e-10 | 3 |
region of nephron tubule | 1.20e-10 | 3 |
proximal tubule | 1.20e-10 | 3 |
cortex of kidney | 2.13e-10 | 12 |
renal parenchyma | 2.13e-10 | 12 |
cortex | 1.65e-08 | 15 |
nephron epithelium | 1.65e-08 | 15 |
renal tubule | 1.65e-08 | 15 |
parenchyma | 1.65e-08 | 15 |
nephron tubule | 1.65e-08 | 15 |
nephron | 1.65e-08 | 15 |
uriniferous tubule | 1.65e-08 | 15 |
nephrogenic mesenchyme | 1.65e-08 | 15 |
excretory tube | 4.91e-08 | 16 |
kidney epithelium | 4.91e-08 | 16 |
female reproductive organ | 1.33e-07 | 37 |
female reproductive system | 1.33e-07 | 37 |
female organism | 6.40e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 6.48e-43 | 6 |
adenocarcinoma | 6.26e-11 | 25 |
female reproductive organ cancer | 3.58e-10 | 27 |
reproductive organ cancer | 1.61e-09 | 29 |