FFCP PHASE1:Hg19::chr20:940152..940156,-: Difference between revisions
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|id=chr20:940152..940156,-
|short_description=p@chr20:940152..940156,-
|description=CAGE_peak_at_chr20:940152..940156,-
|association_with_transcript=NA
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:940152..940156,- | |||
|description=CAGE_peak_at_chr20:940152..940156,- | |||
|id=chr20:940152..940156,- | |||
|ontology_enrichment_celltype=CL:0002559!4.72e-11!4;CL:0000346!8.86e-09!3;CL:1000428!8.86e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.47e-60;3!CL:1000428;1.47e-60;3!CL:0002559;1.03e-36;5!CL:0002620;2.39e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.33e-60,3;CL:1000428,1.33e-60,3;CL:0002559,9.70e-37,5;CL:0002620,2.68e-08,23 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.52e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.51e-11!57;UBERON:0005068!3.51e-11!57;UBERON:0006241!3.51e-11!57;UBERON:0007135!3.51e-11!57;UBERON:0002073!4.72e-11!4;UBERON:0005086!4.72e-11!4;UBERON:0002780!1.07e-10!41;UBERON:0001890!1.07e-10!41;UBERON:0006240!1.07e-10!41;UBERON:0002616!1.25e-10!59;UBERON:0003080!2.39e-10!42;UBERON:0000369!2.55e-09!4;UBERON:0002435!2.55e-09!4;UBERON:0000204!2.55e-09!4;UBERON:0010082!2.55e-09!4;UBERON:0005743!7.43e-09!86;UBERON:0000412!8.86e-09!3;UBERON:0001992!8.86e-09!3;UBERON:0001017!1.08e-08!82;UBERON:0000073!2.25e-08!94;UBERON:0001016!2.25e-08!94;UBERON:0000955!3.50e-08!69;UBERON:0006238!3.50e-08!69;UBERON:0005383!8.09e-08!3;UBERON:0005382!8.09e-08!3;UBERON:0003056!9.98e-08!61;UBERON:0002791!1.10e-07!33;UBERON:0002020!1.59e-07!34;UBERON:0003528!1.59e-07!34;UBERON:0001893!2.20e-07!34;UBERON:0004121!2.85e-07!169;UBERON:0003075!2.93e-07!86;UBERON:0007284!2.93e-07!86;UBERON:0000924!6.39e-07!173;UBERON:0006601!6.39e-07!173;UBERON:0001869!8.22e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.47e-60;3!UBERON:0001992;1.47e-60;3!UBERON:0002073;1.03e-36;5!UBERON:0002067;9.18e-21;9!UBERON:0002097;1.95e-13;41!UBERON:0001003;9.63e-13;15!UBERON:0007376;9.63e-13;15!UBERON:0001873;3.52e-11;2!UBERON:0003102;1.19e-09;50!UBERON:0005383;7.02e-08;3!UBERON:0005382;7.02e-08;3!UBERON:0002199;8.34e-07;46!UBERON:0002416;8.34e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.33e-60,3;UBERON:0001992,1.33e-60,3;UBERON:0002073,9.70e-37,5;UBERON:0005086,9.70e-37,5;UBERON:0002067,8.88e-21,9;UBERON:0004016,8.88e-21,9;UBERON:0010083,8.88e-21,9;UBERON:0002097,2.40e-17,41;UBERON:0002199,1.84e-15,46;UBERON:0002416,1.84e-15,46;UBERON:0001003,9.45e-13,15;UBERON:0007376,9.45e-13,15;UBERON:0007383,9.45e-13,15;UBERON:0001873,2.73e-11,2;UBERON:0010122,2.73e-11,2;UBERON:0003102,1.34e-09,99;UBERON:0005383,5.93e-08,3;UBERON:0005382,5.93e-08,3 | |||
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| ||
|short_description=p@chr20:940152..940156,- | |||
}} | }} |
Latest revision as of 16:38, 28 July 2015
Short description: | p@chr20:940152..940156, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:940152..940156, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.33e-60 | 3 |
stem cell of epidermis | 1.33e-60 | 3 |
hair follicle cell | 9.70e-37 | 5 |
skin fibroblast | 2.68e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.33e-60 | 3 |
papillary layer of dermis | 1.33e-60 | 3 |
hair follicle | 9.70e-37 | 5 |
hair follicle placode | 9.70e-37 | 5 |
dermis | 8.88e-21 | 9 |
dermatome | 8.88e-21 | 9 |
future dermis | 8.88e-21 | 9 |
skin of body | 2.40e-17 | 41 |
integument | 1.84e-15 | 46 |
integumental system | 1.84e-15 | 46 |
skin epidermis | 9.45e-13 | 15 |
outer epithelium | 9.45e-13 | 15 |
enveloping layer of ectoderm | 9.45e-13 | 15 |
caudate nucleus | 2.73e-11 | 2 |
future caudate nucleus | 2.73e-11 | 2 |
surface structure | 1.34e-09 | 99 |
caudate-putamen | 5.93e-08 | 3 |
dorsal striatum | 5.93e-08 | 3 |