FFCP PHASE1:Hg19::chr13:112170767..112170779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:112170767..112170779,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_at_chr13:112170767..112170779,- | |description=CAGE_peak_at_chr13:112170767..112170779,- | ||
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|ontology_enrichment_celltype=CL:0000039!4.07e-15!7;CL:0000586!4.07e-15!7;CL:0002535!6.43e-14!2;CL:0002178!1.19e-09!3;CL:0000083!1.80e-07!4 | |ontology_enrichment_celltype=CL:0000039!4.07e-15!7;CL:0000586!4.07e-15!7;CL:0002535!6.43e-14!2;CL:0002178!1.19e-09!3;CL:0000083!1.80e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.61e-34;2!CL:0002178;3.66e-23;3!CL:0000039;9.43e-11;7!CL:0000586;9.43e-11;7 | |ontology_enrichment_celltype_v019=CL:0002535;3.61e-34;2!CL:0002178;3.66e-23;3!CL:0000039;9.43e-11;7!CL:0000586;9.43e-11;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.61e-34,2;CL:0002178,4.09e-23,3;CL:0000039,8.99e-11,7;CL:0000586,8.99e-11,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1799!7.62e-26!1;DOID:10165!7.62e-26!1;DOID:1798!7.62e-26!1;DOID:3493!8.28e-14!2;DOID:305!1.69e-08!106;DOID:0050687!1.70e-08!143;DOID:3119!4.34e-08!14;DOID:1793!1.80e-07!4 | |ontology_enrichment_disease=DOID:1799!7.62e-26!1;DOID:10165!7.62e-26!1;DOID:1798!7.62e-26!1;DOID:3493!8.28e-14!2;DOID:305!1.69e-08!106;DOID:0050687!1.70e-08!143;DOID:3119!4.34e-08!14;DOID:1793!1.80e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.96e-34;2!DOID:4362;1.40e-14;5 | |ontology_enrichment_disease_v019=DOID:3493;5.96e-34;2!DOID:4362;1.40e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,7.05e-34,2;DOID:4362,1.40e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0006955!6.43e-14!2;UBERON:0004801!6.43e-14!2;UBERON:0002394!1.92e-07!4;UBERON:0003928!1.92e-07!4 | |ontology_enrichment_uberon=UBERON:0006955!6.43e-14!2;UBERON:0004801!6.43e-14!2;UBERON:0002394!1.92e-07!4;UBERON:0003928!1.92e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.61e-34;2!UBERON:0004801;3.61e-34;2!UBERON:0000945;1.71e-14;5!UBERON:0010039;1.71e-14;5!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6 | |ontology_enrichment_uberon_v019=UBERON:0006955;3.61e-34;2!UBERON:0004801;3.61e-34;2!UBERON:0000945;1.71e-14;5!UBERON:0010039;1.71e-14;5!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.61e-34,2;UBERON:0004801,3.61e-34,2;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8 | |||
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|short_description=p@chr13:112170767..112170779,- | |short_description=p@chr13:112170767..112170779,- | ||
}} | }} |
Latest revision as of 14:39, 24 July 2015
Short description: | p@chr13:112170767..112170779, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:112170767..112170779, - |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.61e-34 | 2 |
epithelial cell of stomach | 4.09e-23 | 3 |
germ line cell | 8.99e-11 | 7 |
germ cell | 8.99e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 3.61e-34 | 2 |
cervix epithelium | 3.61e-34 | 2 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
stomach | 1.47e-09 | 8 |
food storage organ | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.05e-34 | 2 |
cervical cancer | 1.40e-14 | 5 |