FFCP PHASE1:Hg19::chr2:234265804..234265830,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:234265804..234265830,+ | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_at_chr2:234265804..234265830,+ | |description=CAGE_peak_at_chr2:234265804..234265830,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.53e-09;5 | |ontology_enrichment_celltype_v019=CL:0000333;2.53e-09;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;1.96e-14;3!DOID:3908;3.35e-09;5!DOID:169;5.54e-08;6 | |ontology_enrichment_disease_v019=DOID:4556;1.96e-14;3!DOID:3908;3.35e-09;5!DOID:169;5.54e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,1.83e-14,3;DOID:3908,3.22e-09,5;DOID:169,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002360!2.60e-10!2;UBERON:0000094!2.60e-10!2;UBERON:0007645!2.60e-10!2;UBERON:0004907!2.44e-09!5 | |ontology_enrichment_uberon=UBERON:0002360!2.60e-10!2;UBERON:0000094!2.60e-10!2;UBERON:0007645!2.60e-10!2;UBERON:0004907!2.44e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.53e-09;5!UBERON:0002410;2.53e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0000013;2.53e-09;5!UBERON:0002410;2.53e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5 | |||
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|short_description=p@chr2:234265804..234265830,+ | |short_description=p@chr2:234265804..234265830,+ | ||
}} | }} |
Latest revision as of 07:53, 29 July 2015
Short description: | p@chr2:234265804..234265830, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:234265804..234265830, + |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.53e-09 | 5 |
autonomic nervous system | 2.53e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.83e-14 | 3 |
non-small cell lung carcinoma | 3.22e-09 | 5 |
neuroendocrine tumor | 5.54e-08 | 6 |