FFCP PHASE1:Hg19::chr12:66036060..66036071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_ENST00000539653_5end | |association_with_transcript=70bp_to_ENST00000539653_5end | ||
|cluster_id=chr12:66036060..66036071,- | |||
|coexpression_cluster_id=C341 | |coexpression_cluster_id=C341 | ||
|description=CAGE_peak_4_at_ENST00000539653_5end | |description=CAGE_peak_4_at_ENST00000539653_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!7.03e-14!9;CL:0002551!2.81e-12!6;CL:0002573!3.42e-11!2;CL:0000594!6.01e-11!3;CL:0002566!7.27e-09!1;CL:0000055!7.63e-08!180 | |ontology_enrichment_celltype=CL:0000188!7.03e-14!9;CL:0002551!2.81e-12!6;CL:0002573!3.42e-11!2;CL:0000594!6.01e-11!3;CL:0002566!7.27e-09!1;CL:0000055!7.63e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.74e-12;3!CL:0002149;8.72e-07;6!CL:0002551;8.72e-07;6!CL:0002255;8.72e-07;6 | |ontology_enrichment_celltype_v019=CL:0002567;2.74e-12;3!CL:0002149;8.72e-07;6!CL:0002551;8.72e-07;6!CL:0002255;8.72e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.89e-12,3;CL:0002551,8.02e-07,6;CL:0002149,8.48e-07,6;CL:0002255,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060085!1.07e-08!1;DOID:3165!1.07e-08!1;DOID:0060121!1.07e-08!1;DOID:2438!1.07e-08!1;DOID:4418!1.07e-08!1 | |ontology_enrichment_disease=DOID:0060085!1.07e-08!1;DOID:3165!1.07e-08!1;DOID:0060121!1.07e-08!1;DOID:2438!1.07e-08!1;DOID:4418!1.07e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4556;1.96e-12;3!DOID:3908;5.54e-08;5!DOID:3001;8.72e-07;6 | |ontology_enrichment_disease_v019=DOID:4556;1.96e-12;3!DOID:3908;5.54e-08;5!DOID:3001;8.72e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,2.07e-12,3;DOID:3908,5.73e-08,5;DOID:3001,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002067!2.38e-08!9;UBERON:0004016!2.38e-08!9;UBERON:0010083!2.38e-08!9 | |ontology_enrichment_uberon=UBERON:0002067!2.38e-08!9;UBERON:0004016!2.38e-08!9;UBERON:0010083!2.38e-08!9 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@ENST00000539653 | |short_description=p4@ENST00000539653 | ||
}} | }} |
Latest revision as of 11:26, 24 July 2015
Short description: | p4@ENST00000539653 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000539653_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | 70bp_to_ENST00000539653_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.89e-12 | 3 |
fibroblast of dermis | 8.02e-07 | 6 |
epithelial cell of uterus | 8.48e-07 | 6 |
stromal cell of endometrium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.07e-12 | 3 |
non-small cell lung carcinoma | 5.73e-08 | 5 |
female reproductive endometrioid cancer | 8.48e-07 | 6 |