FFCP PHASE1:Hg19::chr5:14145687..14145698,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:14145687..14145698,+ | |||
|coexpression_cluster_id=C2807 | |coexpression_cluster_id=C2807 | ||
|description=CAGE_peak_at_chr5:14145687..14145698,+ | |description=CAGE_peak_at_chr5:14145687..14145698,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!7.43e-14!23;CL:0000057!1.86e-11!75;CL:0000055!3.01e-11!180;CL:0000077!2.36e-08!19 | |ontology_enrichment_celltype=CL:0002620!7.43e-14!23;CL:0000057!1.86e-11!75;CL:0000055!3.01e-11!180;CL:0000077!2.36e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000346;7.02e-08;3!CL:1000428;7.02e-08;3 | |ontology_enrichment_celltype_v019=CL:0000346;7.02e-08;3!CL:1000428;7.02e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,6.78e-08,3;CL:1000428,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!7.78e-07!5;DOID:450!7.78e-07!5;DOID:66!7.78e-07!5;DOID:423!7.78e-07!5;DOID:0080000!7.78e-07!5;DOID:11722!7.78e-07!5 | |ontology_enrichment_disease=DOID:17!7.78e-07!5;DOID:450!7.78e-07!5;DOID:66!7.78e-07!5;DOID:423!7.78e-07!5;DOID:0080000!7.78e-07!5;DOID:11722!7.78e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:2513;2.82e-21;1!DOID:2394;2.16e-13;14!DOID:3451;2.47e-11;2!DOID:4159;2.47e-11;2!DOID:0060122;2.47e-11;2!DOID:120;3.09e-07;27!DOID:193;8.95e-07;29 | |ontology_enrichment_disease_v019=DOID:2513;2.82e-21;1!DOID:2394;2.16e-13;14!DOID:3451;2.47e-11;2!DOID:4159;2.47e-11;2!DOID:0060122;2.47e-11;2!DOID:120;3.09e-07;27!DOID:193;8.95e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,2.82e-21,1;DOID:2394,2.16e-13,14;DOID:3451,2.47e-11,2;DOID:4159,2.47e-11,2;DOID:0060122,2.47e-11,2;DOID:120,3.09e-07,27;DOID:193,8.95e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.09e-10!40;UBERON:0002199!1.32e-08!45;UBERON:0002416!1.32e-08!45 | |ontology_enrichment_uberon=UBERON:0002097!3.09e-10!40;UBERON:0002199!1.32e-08!45;UBERON:0002416!1.32e-08!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;7.02e-08;3!UBERON:0001992;7.02e-08;3!UBERON:0002097;7.40e-08;41!UBERON:0002199;6.91e-07;46!UBERON:0002416;6.91e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0000412;7.02e-08;3!UBERON:0001992;7.02e-08;3!UBERON:0002097;7.40e-08;41!UBERON:0002199;6.91e-07;46!UBERON:0002416;6.91e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.47e-08,41;UBERON:0000412,6.78e-08,3;UBERON:0001992,6.78e-08,3;UBERON:0002199,3.14e-07,46;UBERON:0002416,3.14e-07,46 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42306505074684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.538168907066586,0,0.847727604638247,0.900273288253207,0.103052529238439,0.772921620136887,0.18611685633159,1.0126579934476,0.584622030967192,1.7670364197088,0.0920498986422993,0.161646056818812,0.710019185033229,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0.868687840005475,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715880777515084,0,2.48831670129446,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0.343972064943233,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0,0,0.407992870545287,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,5.96358076248976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,3.80805212168795,0,0,0,0,1.59238355479446,0,0.343395705182793,0,0,0.192619830407303,0,0.260994291965212,0.453411851024545,0.231522474323834,0,5.01448755028165,0.308801447160972,0,0.706756583783524,0.578742114812744,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:14145687..14145698,+ | |short_description=p@chr5:14145687..14145698,+ | ||
}} | }} |
Latest revision as of 10:47, 30 July 2015
Short description: | p@chr5:14145687..14145698, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:14145687..14145698, + |
Coexpression cluster: | C2807_liposarcoma_mesothelioma_mesenchymal_Fibroblast_astrocytoma_basal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 6.78e-08 | 3 |
stem cell of epidermis | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.47e-08 | 41 |
dermal papilla | 6.78e-08 | 3 |
papillary layer of dermis | 6.78e-08 | 3 |
integument | 3.14e-07 | 46 |
integumental system | 3.14e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.82e-21 | 1 |
ovarian cancer | 2.16e-13 | 14 |
skin carcinoma | 2.47e-11 | 2 |
skin cancer | 2.47e-11 | 2 |
integumentary system cancer | 2.47e-11 | 2 |
female reproductive organ cancer | 3.09e-07 | 27 |
reproductive organ cancer | 8.95e-07 | 29 |