FFCP PHASE1:Hg19::chr2:75466400..75466410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:75466400..75466410,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_at_chr2:75466400..75466410,+ | |description=CAGE_peak_at_chr2:75466400..75466410,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002622!3.17e-12!3;CL:1000487!3.74e-08!2;CL:0002334!4.61e-07!12 | |ontology_enrichment_celltype=CL:0002622!3.17e-12!3;CL:1000487!3.74e-08!2;CL:0002334!4.61e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000319;6.62e-41;1!CL:0000159;3.11e-21;2!CL:1000415;3.81e-21;2!CL:0002582;1.83e-14;3 | |ontology_enrichment_celltype_v019=CL:0000319;6.62e-41;1!CL:0000159;3.11e-21;2!CL:1000415;3.81e-21;2!CL:0002582;1.83e-14;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,6.62e-41,1;CL:0000159,3.11e-21,2;CL:1000415,3.81e-21,2;CL:0002582,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;6.62e-41;1!DOID:4556;1.83e-14;3!DOID:3908;3.22e-09;5 | |ontology_enrichment_disease_v019=DOID:3030;6.62e-41;1!DOID:4556;1.83e-14;3!DOID:3908;3.22e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,6.62e-41,1;DOID:4556,1.60e-14,3;DOID:3908,2.97e-09,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002294;1.44e-23;7!UBERON:0001173;1.44e-23;7!UBERON:0002110;1.40e-14;3!UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0002423;2.35e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002294;1.44e-23;7!UBERON:0001173;1.44e-23;7!UBERON:0002110;1.40e-14;3!UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0002423;2.35e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.35e-18,9;UBERON:0001173,1.35e-18,9;UBERON:0004912,1.35e-18,9;UBERON:0002110,1.40e-14,3;UBERON:0006242,1.40e-14,3;UBERON:0002394,6.78e-08,6;UBERON:0003928,6.78e-08,6;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25 | |||
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| ||
|short_description=p@chr2:75466400..75466410,+ | |short_description=p@chr2:75466400..75466410,+ | ||
}} | }} |
Latest revision as of 12:25, 29 July 2015
Short description: | p@chr2:75466400..75466410, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:75466400..75466410, + |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 6.62e-41 | 1 |
seromucus secreting cell | 3.11e-21 | 2 |
epithelial cell of gall bladder | 3.81e-21 | 2 |
visceral preadipocyte | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.35e-18 | 9 |
biliary tree | 1.35e-18 | 9 |
biliary bud | 1.35e-18 | 9 |
gallbladder | 1.40e-14 | 3 |
gall bladder primordium | 1.40e-14 | 3 |
bile duct | 6.78e-08 | 6 |
digestive system duct | 6.78e-08 | 6 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.62e-41 | 1 |
lung large cell carcinoma | 1.60e-14 | 3 |
non-small cell lung carcinoma | 2.97e-09 | 5 |