FFCP PHASE1:Hg19::chr2:170115546..170115580,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:170115546..170115580,- | |||
|coexpression_cluster_id=C161 | |coexpression_cluster_id=C161 | ||
|description=CAGE_peak_at_chr2:170115546..170115580,- | |description=CAGE_peak_at_chr2:170115546..170115580,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!3.63e-08!19 | |ontology_enrichment_celltype=CL:0000077!3.63e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;7.04e-34;19!CL:0002097;3.11e-21;2!CL:0000174;1.22e-14;3!CL:0000213;2.88e-09;58!CL:0000215;2.88e-09;58 | |ontology_enrichment_celltype_v019=CL:0000077;7.04e-34;19!CL:0002097;3.11e-21;2!CL:0000174;1.22e-14;3!CL:0000213;2.88e-09;58!CL:0000215;2.88e-09;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.04e-34,19;CL:0002097,3.11e-21,2;CL:0000174,1.22e-14,3;CL:0000213,1.24e-11,58;CL:0000215,1.24e-11,58;CL:0000076,9.21e-11,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1799!1.08e-10!1;DOID:10165!1.08e-10!1;DOID:1798!1.08e-10!1;DOID:170!3.34e-07!6 | |ontology_enrichment_disease=DOID:1799!1.08e-10!1;DOID:10165!1.08e-10!1;DOID:1798!1.08e-10!1;DOID:170!3.34e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:170;5.54e-08;6 | |ontology_enrichment_disease_v019=DOID:170;5.54e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:170,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002038!2.74e-10!1;UBERON:0009661!2.74e-10!1;UBERON:0002336!3.01e-10!1;UBERON:0001018!3.01e-10!1;UBERON:0002473!3.01e-10!1;UBERON:0005340!3.01e-10!1;UBERON:0002316!3.01e-10!1;UBERON:0003544!3.01e-10!1;UBERON:0001020!3.01e-10!1;UBERON:0005970!3.01e-10!1;UBERON:0002437!3.01e-10!1;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1 | |ontology_enrichment_uberon=UBERON:0002038!2.74e-10!1;UBERON:0009661!2.74e-10!1;UBERON:0002336!3.01e-10!1;UBERON:0001018!3.01e-10!1;UBERON:0002473!3.01e-10!1;UBERON:0005340!3.01e-10!1;UBERON:0002316!3.01e-10!1;UBERON:0003544!3.01e-10!1;UBERON:0001020!3.01e-10!1;UBERON:0005970!3.01e-10!1;UBERON:0002437!3.01e-10!1;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.22e-14;3!UBERON:0001235;1.22e-14;3!UBERON:0006858;1.22e-14;3 | |ontology_enrichment_uberon_v019=UBERON:0002369;1.22e-14;3!UBERON:0001235;1.22e-14;3!UBERON:0006858;1.22e-14;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.22e-14,3;UBERON:0001235,1.22e-14,3;UBERON:0006858,1.22e-14,3 | |||
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|short_description=p@chr2:170115546..170115580,- | |short_description=p@chr2:170115546..170115580,- | ||
}} | }} |
Latest revision as of 02:17, 29 July 2015
Short description: | p@chr2:170115546..170115580, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:170115546..170115580, - |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.04e-34 | 19 |
cortical cell of adrenal gland | 3.11e-21 | 2 |
steroid hormone secreting cell | 1.22e-14 | 3 |
lining cell | 1.24e-11 | 58 |
barrier cell | 1.24e-11 | 58 |
squamous epithelial cell | 9.21e-11 | 63 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.22e-14 | 3 |
adrenal cortex | 1.22e-14 | 3 |
adrenal/interrenal gland | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 5.54e-08 | 6 |