FFCP PHASE1:Hg19::chr19:51563263..51563273,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:51563263..51563273,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr19:51563263..51563273,+ | |description=CAGE_peak_at_chr19:51563263..51563273,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!7.55e-09!5 | |ontology_enrichment_celltype=CL:0002322!7.55e-09!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.46e-50;1 | |ontology_enrichment_development_v019=UBERON:0009143;1.46e-50;1 | ||
|ontology_enrichment_disease=DOID:1749!8.06e-07!14 | |ontology_enrichment_disease=DOID:1749!8.06e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!9.03e-31!3;UBERON:0001033!9.03e-31!3;UBERON:0010056!9.03e-31!3;UBERON:0001042!1.74e-16!10;UBERON:0009145!1.74e-16!10;UBERON:0006562!5.19e-15!11;UBERON:0000166!6.37e-12!21;UBERON:0002372!9.57e-12!1;UBERON:0001961!9.57e-12!1;UBERON:0001744!9.57e-12!1;UBERON:0001735!9.57e-12!1;UBERON:0000997!5.43e-11!1;UBERON:0005056!5.43e-11!1;UBERON:0003343!9.42e-11!4;UBERON:0004785!9.42e-11!4;UBERON:0000974!1.99e-09!10;UBERON:0000078!2.98e-09!18;UBERON:0000165!6.56e-09!28;UBERON:0000930!6.56e-09!28;UBERON:0003729!8.84e-09!5;UBERON:0001557!8.97e-09!19;UBERON:0000344!4.69e-08!12;UBERON:0000002!1.38e-07!6;UBERON:0001560!1.38e-07!6;UBERON:0000161!4.28e-07!35 | |ontology_enrichment_uberon=UBERON:0001723!9.03e-31!3;UBERON:0001033!9.03e-31!3;UBERON:0010056!9.03e-31!3;UBERON:0001042!1.74e-16!10;UBERON:0009145!1.74e-16!10;UBERON:0006562!5.19e-15!11;UBERON:0000166!6.37e-12!21;UBERON:0002372!9.57e-12!1;UBERON:0001961!9.57e-12!1;UBERON:0001744!9.57e-12!1;UBERON:0001735!9.57e-12!1;UBERON:0000997!5.43e-11!1;UBERON:0005056!5.43e-11!1;UBERON:0003343!9.42e-11!4;UBERON:0004785!9.42e-11!4;UBERON:0000974!1.99e-09!10;UBERON:0000078!2.98e-09!18;UBERON:0000165!6.56e-09!28;UBERON:0000930!6.56e-09!28;UBERON:0003729!8.84e-09!5;UBERON:0001557!8.97e-09!19;UBERON:0000344!4.69e-08!12;UBERON:0000002!1.38e-07!6;UBERON:0001560!1.38e-07!6;UBERON:0000161!4.28e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.99e-50;1!UBERON:0005795;3.99e-50;1!UBERON:0001961;3.99e-50;1!UBERON:0001744;3.99e-50;1!UBERON:0001042;3.99e-50;1!UBERON:0001735;3.99e-50;1!UBERON:0006562;7.14e-26;2!UBERON:0001043;6.76e-18;3!UBERON:0001723;9.45e-18;3!UBERON:0001033;9.45e-18;3!UBERON:0002050;3.26e-11;5!UBERON:0005423;3.26e-11;5!UBERON:0000165;4.06e-08;28 | |ontology_enrichment_uberon_v019=UBERON:0002372;3.99e-50;1!UBERON:0005795;3.99e-50;1!UBERON:0001961;3.99e-50;1!UBERON:0001744;3.99e-50;1!UBERON:0001042;3.99e-50;1!UBERON:0001735;3.99e-50;1!UBERON:0006562;7.14e-26;2!UBERON:0001043;6.76e-18;3!UBERON:0001723;9.45e-18;3!UBERON:0001033;9.45e-18;3!UBERON:0002050;3.26e-11;5!UBERON:0005423;3.26e-11;5!UBERON:0000165;4.06e-08;28 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.42e-50,1;UBERON:0001961,2.42e-50,1;UBERON:0001744,2.42e-50,1;UBERON:0001735,2.42e-50,1;UBERON:0001042,9.44e-21,10;UBERON:0009145,9.44e-21,10;UBERON:0006562,5.63e-19,11;UBERON:0001043,6.76e-18,3;UBERON:0009143,6.76e-18,3;UBERON:0001723,1.12e-17,3;UBERON:0001033,1.12e-17,3;UBERON:0010056,1.12e-17,3;UBERON:0001557,1.81e-11,19;UBERON:0000166,4.74e-10,22;UBERON:0000165,7.15e-08,29;UBERON:0000930,7.15e-08,29 | |||
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|short_description=p@chr19:51563263..51563273,+ | |short_description=p@chr19:51563263..51563273,+ | ||
}} | }} |
Latest revision as of 16:38, 27 July 2015
Short description: | p@chr19:51563263..51563273, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51563263..51563273, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 2.42e-50 | 1 |
mucosa-associated lymphoid tissue | 2.42e-50 | 1 |
lymphoid tissue | 2.42e-50 | 1 |
tonsillar ring | 2.42e-50 | 1 |
chordate pharynx | 9.44e-21 | 10 |
pharyngeal region of foregut | 9.44e-21 | 10 |
pharynx | 5.63e-19 | 11 |
esophagus | 6.76e-18 | 3 |
esophageal region | 6.76e-18 | 3 |
tongue | 1.12e-17 | 3 |
gustatory system | 1.12e-17 | 3 |
future tongue | 1.12e-17 | 3 |
upper respiratory tract | 1.81e-11 | 19 |
oral opening | 4.74e-10 | 22 |
mouth | 7.15e-08 | 29 |
stomodeum | 7.15e-08 | 29 |