FFCP PHASE1:Hg19::chr5:122434947..122434959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93166 | |EntrezGene=93166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9350 | |HGNC=9350 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-480bp_to_ENST00000434521_5end | |association_with_transcript=-480bp_to_ENST00000434521_5end | ||
|cluster_id=chr5:122434947..122434959,+ | |||
|coexpression_cluster_id=C382 | |coexpression_cluster_id=C382 | ||
|description=CAGE_peak_4_at_PRDM6_5end | |description=CAGE_peak_4_at_PRDM6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002580!5.26e-09!3;CL:0002599!3.20e-07!1;CL:0002174!3.82e-07!1;CL:0000501!3.82e-07!1 | |ontology_enrichment_celltype=CL:0002580!5.26e-09!3;CL:0002599!3.20e-07!1;CL:0002174!3.82e-07!1;CL:0000501!3.82e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002580;1.47e-09;3 | |ontology_enrichment_celltype_v019=CL:0002580;1.47e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.30e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.15e-26;1!UBERON:0000358;2.78e-26;1!UBERON:0006242;6.72e-26;1 | |ontology_enrichment_development_v019=UBERON:0010115;2.15e-26;1!UBERON:0000358;2.78e-26;1!UBERON:0006242;6.72e-26;1 | ||
|ontology_enrichment_disease=DOID:3369!3.01e-07!1 | |ontology_enrichment_disease=DOID:3369!3.01e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.07e-07;31 | |ontology_enrichment_disease_v019=DOID:8692;1.07e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,7.90e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002363!1.46e-07!1;UBERON:0007647!1.46e-07!1;UBERON:0010115!1.46e-07!1;UBERON:0000996!2.52e-07!1 | |ontology_enrichment_uberon=UBERON:0002363!1.46e-07!1;UBERON:0007647!1.46e-07!1;UBERON:0010115!1.46e-07!1;UBERON:0000996!2.52e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.15e-26;1!UBERON:0002360;6.43e-14;2!UBERON:0000094;6.43e-14;2!UBERON:0010743;6.43e-14;2!UBERON:0002110;1.47e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002363;2.15e-26;1!UBERON:0002360;6.43e-14;2!UBERON:0000094;6.43e-14;2!UBERON:0010743;6.43e-14;2!UBERON:0002110;1.47e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,2.16e-26,1;UBERON:0007645,2.16e-26,1;UBERON:0007647,2.16e-26,1;UBERON:0010115,2.16e-26,1;UBERON:0002360,6.43e-14,2;UBERON:0000094,6.43e-14,2;UBERON:0010743,6.43e-14,2;UBERON:0002110,1.41e-09,3;UBERON:0006242,1.41e-09,3 | |||
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|short_description=p4@PRDM6 | |short_description=p4@PRDM6 | ||
}} | }} |
Latest revision as of 00:06, 20 September 2015
Short description: | p4@PRDM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRDM6_5end |
Coexpression cluster: | C382_dura_Preadipocyte_Adipocyte_Astrocyte_trachea_diaphragm_vein |
Association with transcript: | -480bp_to_ENST00000434521_5end |
EntrezGene: | PRDM6 |
HGNC: | 9350 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
dura mater | 2.16e-26 | 1 |
future meninx | 2.16e-26 | 1 |
ectomeninx | 2.16e-26 | 1 |
future dura mater | 2.16e-26 | 1 |
meninx | 6.43e-14 | 2 |
membrane organ | 6.43e-14 | 2 |
meningeal cluster | 6.43e-14 | 2 |
gallbladder | 1.41e-09 | 3 |
gall bladder primordium | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.90e-08 | 31 |