FFCP PHASE1:Hg19::chr16:25160277..25160292,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506655 | |EntrezGene=100506655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_NR_039998,uc002dob.1_5end | |association_with_transcript=60bp_to_NR_039998,uc002dob.1_5end | ||
|cluster_id=chr16:25160277..25160292,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_3_at_LOC100506655_5end | |description=CAGE_peak_3_at_LOC100506655_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!2.76e-44!7;CL:0000586!2.76e-44!7;CL:0000064!6.23e-37!3;CL:0005012!6.23e-37!3;CL:0000067!6.23e-37!3;CL:0002304!6.23e-37!3;CL:0000075!1.77e-07!27 | |ontology_enrichment_celltype=CL:0000039!2.76e-44!7;CL:0000586!2.76e-44!7;CL:0000064!6.23e-37!3;CL:0005012!6.23e-37!3;CL:0000067!6.23e-37!3;CL:0002304!6.23e-37!3;CL:0000075!1.77e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.35e-17;7!CL:0000586;5.35e-17;7!CL:0000083;2.11e-08;4 | |ontology_enrichment_celltype_v019=CL:0000039;5.35e-17;7!CL:0000586;5.35e-17;7!CL:0000083;2.11e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.13e-17,7;CL:0000586,5.13e-17,7;CL:0000083,2.11e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | |ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | ||
|ontology_enrichment_disease=DOID:3095!3.84e-14!22;DOID:2994!3.84e-14!22;DOID:1799!4.53e-14!1;DOID:10165!4.53e-14!1;DOID:1798!4.53e-14!1 | |ontology_enrichment_disease=DOID:3095!3.84e-14!22;DOID:2994!3.84e-14!22;DOID:1799!4.53e-14!1;DOID:10165!4.53e-14!1;DOID:1798!4.53e-14!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.78e-29;1!DOID:10165;1.78e-29;1!DOID:1798;1.78e-29;1!DOID:1793;2.11e-08;4 | |ontology_enrichment_disease_v019=DOID:1799;1.78e-29;1!DOID:10165;1.78e-29;1!DOID:1798;1.78e-29;1!DOID:1793;2.11e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,1.78e-29,1;DOID:10165,1.78e-29,1;DOID:1798,1.78e-29,1;DOID:1793,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001778!6.23e-37!3;UBERON:0001775!6.23e-37!3;UBERON:0000488!6.70e-28!4;UBERON:0002203!7.63e-19!6;UBERON:0001768!7.63e-19!6;UBERON:0007625!1.46e-10!11;UBERON:0002200!1.46e-10!11;UBERON:0006876!1.46e-10!11;UBERON:0001801!2.04e-08!14;UBERON:0000473!4.15e-07!8 | |ontology_enrichment_uberon=UBERON:0001778!6.23e-37!3;UBERON:0001775!6.23e-37!3;UBERON:0000488!6.70e-28!4;UBERON:0002203!7.63e-19!6;UBERON:0001768!7.63e-19!6;UBERON:0007625!1.46e-10!11;UBERON:0002200!1.46e-10!11;UBERON:0006876!1.46e-10!11;UBERON:0001801!2.04e-08!14;UBERON:0000473!4.15e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.70e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0001987;1.70e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4 | |||
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|short_description=p3@LOC100506655 | |short_description=p3@LOC100506655 | ||
}} | }} |
Latest revision as of 19:40, 15 September 2015
Short description: | p3@LOC100506655 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100506655_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 60bp_to_NR_039998, uc002dob.1_5end |
EntrezGene: | LOC100506655 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.13e-17 | 7 |
germ cell | 5.13e-17 | 7 |
epithelial cell of pancreas | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.78e-29 | 1 |
endocrine pancreas cancer | 1.78e-29 | 1 |
pancreatic endocrine carcinoma | 1.78e-29 | 1 |
pancreatic cancer | 2.11e-08 | 4 |