FFCP PHASE1:Hg19::chr10:96046777..96046788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100128054 | |EntrezGene=100128054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_NR_033969,uc001kjo.1_5end | |association_with_transcript=38bp_to_NR_033969,uc001kjo.1_5end | ||
|cluster_id=chr10:96046777..96046788,- | |||
|coexpression_cluster_id=C1602 | |coexpression_cluster_id=C1602 | ||
|description=CAGE_peak_4_at_LOC100128054_5end | |description=CAGE_peak_4_at_LOC100128054_5end | ||
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|ontology_enrichment_celltype=CL:0002334!1.87e-11!12;CL:0002615!2.51e-10!3;CL:0002590!6.14e-10!3;CL:0002580!6.91e-10!3;CL:0002579!1.75e-09!3;CL:0002586!2.54e-09!3;CL:0002541!3.99e-09!3;CL:0000325!2.17e-08!39;CL:0005020!8.53e-08!6;CL:0002138!8.53e-08!6;CL:0005022!8.53e-08!6;CL:0002617!1.66e-07!2;CL:0000149!4.44e-07!4;CL:0000136!5.42e-07!15 | |ontology_enrichment_celltype=CL:0002334!1.87e-11!12;CL:0002615!2.51e-10!3;CL:0002590!6.14e-10!3;CL:0002580!6.91e-10!3;CL:0002579!1.75e-09!3;CL:0002586!2.54e-09!3;CL:0002541!3.99e-09!3;CL:0000325!2.17e-08!39;CL:0005020!8.53e-08!6;CL:0002138!8.53e-08!6;CL:0005022!8.53e-08!6;CL:0002617!1.66e-07!2;CL:0000149!4.44e-07!4;CL:0000136!5.42e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002615;2.37e-28;3!CL:0002617;8.14e-20;2!CL:0002334;6.15e-19;12!CL:0000136;8.15e-18;13!CL:0002580;2.79e-13;3!CL:0002579;4.29e-13;3!CL:0002590;6.17e-13;3!CL:0000222;1.81e-10;1!CL:0002581;1.81e-10;1 | |ontology_enrichment_celltype_v019=CL:0002615;2.37e-28;3!CL:0002617;8.14e-20;2!CL:0002334;6.15e-19;12!CL:0000136;8.15e-18;13!CL:0002580;2.79e-13;3!CL:0002579;4.29e-13;3!CL:0002590;6.17e-13;3!CL:0000222;1.81e-10;1!CL:0002581;1.81e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.88e-28,3;CL:0002617,8.54e-20,2;CL:0002334,7.02e-19,12;CL:0000136,1.88e-15,15;CL:0002580,3.16e-13,3;CL:0002590,4.29e-13,3;CL:0002579,5.15e-13,3;CL:0002581,1.57e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.45e-10;1 | |ontology_enrichment_development_v019=UBERON:0003124;3.45e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!4.36e-18!6;UBERON:0002358!4.36e-18!6;UBERON:0003684!4.36e-18!6;UBERON:0001178!4.36e-18!6;UBERON:0004457!2.20e-11!12;UBERON:0000042!2.20e-11!12;UBERON:0000966!1.96e-09!5;UBERON:0005388!1.96e-09!5;UBERON:0001802!1.96e-09!5;UBERON:0001781!2.54e-09!3;UBERON:0001782!2.54e-09!3;UBERON:0005424!2.54e-09!3;UBERON:0004923!3.66e-09!57;UBERON:0000476!3.99e-09!3;UBERON:0000920!3.99e-09!3;UBERON:0007625!1.30e-08!11;UBERON:0000970!1.26e-07!20;UBERON:0000310!1.30e-07!10;UBERON:0001456!2.71e-07!21;UBERON:0002104!3.35e-07!21;UBERON:0005406!3.64e-07!2;UBERON:0001443!7.06e-07!11;UBERON:0005631!8.00e-07!14;UBERON:0000158!8.00e-07!14;UBERON:0003124!9.18e-07!7 | |ontology_enrichment_uberon=UBERON:0003688!4.36e-18!6;UBERON:0002358!4.36e-18!6;UBERON:0003684!4.36e-18!6;UBERON:0001178!4.36e-18!6;UBERON:0004457!2.20e-11!12;UBERON:0000042!2.20e-11!12;UBERON:0000966!1.96e-09!5;UBERON:0005388!1.96e-09!5;UBERON:0001802!1.96e-09!5;UBERON:0001781!2.54e-09!3;UBERON:0001782!2.54e-09!3;UBERON:0005424!2.54e-09!3;UBERON:0004923!3.66e-09!57;UBERON:0000476!3.99e-09!3;UBERON:0000920!3.99e-09!3;UBERON:0007625!1.30e-08!11;UBERON:0000970!1.26e-07!20;UBERON:0000310!1.30e-07!10;UBERON:0001456!2.71e-07!21;UBERON:0002104!3.35e-07!21;UBERON:0005406!3.64e-07!2;UBERON:0001443!7.06e-07!11;UBERON:0005631!8.00e-07!14;UBERON:0000158!8.00e-07!14;UBERON:0003124!9.18e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.51e-38;6!UBERON:0002358;4.51e-38;6!UBERON:0003684;4.51e-38;6!UBERON:0001178;4.51e-38;6!UBERON:0004457;2.16e-25;9!UBERON:0000042;2.16e-25;9!UBERON:0000310;3.82e-15;10!UBERON:0001443;8.69e-14;11!UBERON:0007195;1.30e-10;1!UBERON:0005284;4.07e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0003688;4.51e-38;6!UBERON:0002358;4.51e-38;6!UBERON:0003684;4.51e-38;6!UBERON:0001178;4.51e-38;6!UBERON:0004457;2.16e-25;9!UBERON:0000042;2.16e-25;9!UBERON:0000310;3.82e-15;10!UBERON:0001443;8.69e-14;11!UBERON:0007195;1.30e-10;1!UBERON:0005284;4.07e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.70e-38,6;UBERON:0002358,4.70e-38,6;UBERON:0003684,4.70e-38,6;UBERON:0001178,4.70e-38,6;UBERON:0004457,5.01e-19,12;UBERON:0000042,5.01e-19,12;UBERON:0000310,4.19e-15,10;UBERON:0001443,9.44e-14,11;UBERON:0007195,1.30e-10,1;UBERON:0005284,3.27e-08,5 | |||
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| ||
|short_description=p4@LOC100128054 | |short_description=p4@LOC100128054 | ||
}} | }} |
Latest revision as of 02:12, 20 September 2015
Short description: | p4@LOC100128054 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC100128054_5end |
Coexpression cluster: | C1602_mesothelioma_Adipocyte_Preadipocyte_bone_Smooth_papillary_Cardiac |
Association with transcript: | 38bp_to_NR_033969, uc001kjo.1_5end |
EntrezGene: | LOC100128054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.88e-28 | 3 |
adipocyte of breast | 8.54e-20 | 2 |
preadipocyte | 7.02e-19 | 12 |
fat cell | 1.88e-15 | 15 |
preadipocyte of the breast | 3.16e-13 | 3 |
smooth muscle cell of the brain vasculature | 4.29e-13 | 3 |
omentum preadipocyte | 5.15e-13 | 3 |
perirenal preadipocyte | 1.57e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.70e-38 | 6 |
peritoneum | 4.70e-38 | 6 |
abdominal cavity | 4.70e-38 | 6 |
visceral peritoneum | 4.70e-38 | 6 |
cavity lining | 5.01e-19 | 12 |
serous membrane | 5.01e-19 | 12 |
breast | 4.19e-15 | 10 |
chest | 9.44e-14 | 11 |
stroma of bone marrow | 1.30e-10 | 1 |
brain vasculature | 3.27e-08 | 5 |