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MacroAPE 1083:Motif TTGCAN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;14688!02;0;0;0;14688!03;0;0;14688;0!04;0;14688;0;0!05;14688;0;0;0!06;3672;3672;3672;3672 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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06D6;0.540673!10464-106H5;0.607584!10827-111C8;0.0500267!10789-110H6;0.204941!10828-111C9;0.543535!10788-110H5;0.826223!10792-110H9;0.395636!10765-110E9;0.24113!10829-111D1;0.833852!10830-111D2;0.35797!10831-111D3;0.777797!10832-111D4;0.241713!10833-111D5;0.996433!10764-110E8;0.537519!10770-110F5;0.731453!10399-106A3;0.505552!10400-106A4;0.352932!10405-106A9;0.280423!10834-111D6;0.503474!10835-111D7;0.46286!10836-111D8;0.00202866!10837-111D9;0.121257!10699-109G6;0.0654809!10802-111A1;0.0444885!10796-110I4;0.0252743!10010-101C1;0.0481739!10810-111A9;0.422852!10421-106C7;0.0193059!10708-109H6;0.817671!12235-129G3;0.118937!12236-129G4;0.199582!12237-129G5;0.253808!10167-103B5;0.14542!10151-102I7;0.0506582!10428-106D5;0.0253654!10795-110I3;6.2331e-05!10805-111A4;0.698359!10052-101G7;0.0148392!10189-103D9;0.0364105!10589-108D4;0.00645871!10425-106D2;0.136813!10427-106D4;0.136645!10702-109G9;0.925639!10432-106D9;0.740718!10496-107C1;0.0612223!10718-109I7;0.627721!10011-101C2;0.834408!10053-101G8;0.131199!10686-109F2;0.140032!10084-102B3;0.568588!10012-101C3;0.0428159!10085-102B4;0.0308774!10482-107A5;0.101075!10419-106C5;0.461108!10080-102A8;0.219316!10760-110E4;0.182339!10709-109H7;0.0524542!10710-109H8;0.0390762!10703-109H1;0.510419!10719-109I8;0.550765!10642-109A3;0.605176!10177-103C6;0.886385!10164-103B2;0.0388028!10173-103C2;0.0267739!10166-103B4;0.132097!10083-102B2;0.123099!10188-103D8;0.112827!10552-107I3;0.0499959!10553-107I4;0.346342!10013-101C4;0.270008!10536-107G5;0.216698!10618-108G6;0.957693!10423-106C9;0.187457!10785-110H2;0.133732!12238-129G6;0.0435297!12239-129G7;0.657899!12240-129G8;0.546017!10416-106C2;0.717782!10801-110I9;0.263008!10766-110F1;0.144267!10824-111C5;0.00193401!10825-111C6;0.0430925!10826-111C7;0.0294677!10454-106G4;0.033084!10409-106B4;0.0155667!10638-108I8;0.0132926!10636-108I6;0.0394243!10513-107D9;0.379105!10420-106C6;0.0552267!10082-102B1;0.26818!10014-101C5;0.116582!10070-101I7;0.331045!10452-106G2;0.159427!10453-106G3;0.726338!10449-106F8;0.832226!10042-101F6;0.941963!10069-101I6;0.146662!10193-103E4;0.851848!10631-108I1;0.0500933!10438-106E6;0.936177!10488-107B2;0.143193!10196-103E7;0.105166!10071-101I8;0.363934!10071-101I8;0.535168!10041-101F5;0.141076!10451-106G1;0.0326457!10450-106F9;0.354187!10604-108F1;0.364571!10605-108F2;0.20598!10606-108F3;0.0560879!10603-108E9;0.185056!10497-107C2;0.06835!10448-106F7;0.148357!10643-109A4;0.150306!10426-106D3;0.0737794!10431-106D8;0.104019!10197-103E8;0.168723!10443-106F2;0.337061!10815-111B5;0.841308!10816-111B6;0.214934!10817-111B7;0.478145!10015-101C6;0.162852!10410-106B5;0.477982!10054-101G9;0.0310704!10758-110E2;0.323332!10711-109H9;0.74051!10040-101F4;0.623644!10470-106I2;0.0490801!10415-106C1;0.152722!10198-103E9;0.108217!10614-108G2;0.18533!10612-108F9;0.122019!10549-107H9;0.240224!10615-108G3;0.116526!10487-107B1;0.856308!10433-106E1;0.36152!10688-109F4;0.140389!10444-106F3;0.0942919!10444-106F3;0.576734!10485-107A8;0.596817!10413-106B8;0.608971!10175-103C4;0.14003!10161-103A8;0.0401214!12131-128D7;0.0954071!10624-108H3;0.842126!10712-109I1;0.112469!10205-103F7;0.378485!10206-103F8;0.394763!10207-103F9;0.397207!10050-101G5;0.525968!10051-101G6;0.379049!10016-101C7;0.385342!10046-101G1;0.3384!10778-110G4;0.371224!10633-108I3;0.14168!10818-111B8;0.406035!10819-111B9;0.111808!10820-111C1;0.11115!10484-107A7;0.137501!10808-111A7;0.29381!10169-103B7;0.744009!10153-102I9;0.038391!13425-144D5;0.0421945!13433-144E4;0.549294!13437-144E8;0.650458!11904-125F5;0.527029!11905-125F6;0.648273!10039-101F3;0.772893!10791-110H8;0.0348306!10017-101C8;0.0797731!10045-101F9;0.953848!10509-107D5;0.512032!10839-111E2;0.217203!10692-109F8;0.705265!10079-102A7;0.453215!10078-102A6;0.319939!10721-110A1;0.391599!10569-108B2;0.0583119!10570-108B3;0.27257!10571-108B4;0.463022!10647-109A8;0.259622!10752-110D5;0.28601!10782-110G8;0.0513526!10726-110A6;0.0810225!10018-101C9;0.236017!10086-102B5;0.456289!10182-103D2;0.553398!10165-103B3;0.0553856!10499-107C4;0.0632616!10408-106B3;0.261627!10019-101D1;0.0817624!10068-101I5;0.269147!10075-102A3;0.734528!10077-102A5;0.383536!10727-110A7;0.074348!10775-110G1;0.872194!10412-106B7;0.818094!12231-129F8;0.385932!12232-129F9;0.47862!12233-129G1;0.478305!12234-129G2;0.55608!10414-106B9;0.497088!10170-103B8;0.356241!10183-103D3;0.0511356!10150-102I6;0.0307263!10174-103C3;0.0272041!10155-103A2;0.151979!10038-101F2;0.0926982!10838-111E1;0.0398433!10759-110E3;0.759766!10514-107E1;0.152661!10465-106H6;0.161736!10691-109F7;0.134989!10843-111E6;0.255619!10844-111E7;0.547374!11747-123G1;0.940862!11748-123G2;0.834043!11749-123G3;0.381387!11750-123G4;0.685609!11751-123G5;0.988462!11840-124H4;0.729515!11752-123G6;0.849397!11753-123G7;0.224298!11754-123G8;0.60643!11755-123G9;0.969657!11756-123H1;0.922284!11833-124G6;0.723174!11760-123H5;0.0619534!11836-124G9;0.25716!11758-123H3;0.68985!11835-124G8;0.506943!11762-123H7;0.306839!11838-124H2;0.65875!11757-123H2;0.567274!11759-123H4;0.820149!11761-123H6;0.302234!11842-124H6;0.224714!11837-124H1;0.0654466!10568-108B1;0.175646!13230-141I8;0.124712!13231-141I9;0.320626!10696-109G3;0.250359!10493-107B7;0.30261!10494-107B8;0.12456!10850-111F4;0.0692811!10851-111F5;0.423324!10852-111F6;0.134488!10853-111F7;0.36847!10854-111F8;0.384352!10855-111F9;0.406229!10856-111G1;0.648541!10847-111F1;0.470951!10846-111E9;0.723435!10848-111F2;0.199476!10845-111E8;0.201053!10857-111G2;0.15415!10858-111G3;0.135496!10156-103A3;0.223473!11901-125F2;0.0325943!11902-125F3;0.704326!11903-125F4;0.983313!10689-109F5;0.825519!10648-109A9;0.142619!10784-110H1;0.380601!10744-110C6;0.200774!10772-110F7;0.831609!10474-106I6;0.796936!10600-108E6;0.668516!10684-109E9;0.627797!12226-129F3;0.679569!12227-129F4;0.287706!10508-107D4;0.126277!10539-107G8;0.324387!10607-108F4;0.496121!10555-107I6;0.857783!10774-110F9;0.50708!10637-108I7;0.431907!10663-109C6;0.523242!10728-110A8;0.894089!10729-110A9;0.776417!10430-106D7;0.238104!10730-110B1;0.527449!10813-111B3;0.50996!10812-111B2;0.866125!10037-101F1;0.862638!10172-103C1;0.0452066!10163-103B1;0.0635568!10076-102A4;0.0372467!10073-102A1;0.0426025!10036-101E9;0.0805255!10195-103E6;0.0306673!10277-104E7;0.0404104!10434-106E2;0.900018!10550-107I1;0.110512!10545-107H5;0.165738!10544-107H4;0.142807!10704-109H2;0.175073!10510-107D6;0.222744!10558-107I9;0.996308!10020-101D2;0.049096!10732-110B3;0.233561!10049-101G4;0.953364!10698-109G5;0.596994!10437-106E5;0.0607915!10417-106C3;0.508093!10035-101E8;0.00606609!10171-103B9;0.0481784!10157-103A4;0.0587954!10034-101E7;0.0307007!10072-101I9;0.0507433!10199-103F1;0.107178!10200-103F2;0.702579!10697-109G4;0.586336!10723-110A3;0.570346!10179-103C8;0.39899!10160-103A7;0.296324!10180-103C9;0.446895!10162-103A9;0.950287!10021-101D3;0.768156!10840-111E3;0.721015!10706-109H4;0.985299!10033-101E6;0.99899!10032-101E5;0.0742085!10490-107B4;0.0370273!10439-106E7;0.0993204!10022-101D4;0.0150199!10176-103C5;0.284426!10469-106I1;0.031415!10067-101I4;0.114371!10411-106B6;0.081173!10471-106I3;0.382136!10030-101E3;0.693416!10475-106I7;0.221698!10787-110H4;0.220607!10477-106I9;0.00228386!10695-109G2;0.859626!11771-123I7;0.469851!11772-123I8;0.616896!11773-123I9;0.825729!10093-102C3;0.988548!10442-106F1;0.775045!10442-106F1;0.733016!10201-103F3;0.937394!10639-108I9;0.489167!11843-124H7;0.221766!11841-124H5;0.473675!10693-109F9;0.117439!10436-106E4;0.356958!10483-107A6;0.452779!10282-104F3;0.0780843!10023-101D5;0.727793!10066-101I3;0.817998!10065-101I2;0.700423!10800-110I8;0.258872!10610-108F7;0.556423!10841-111E4;0.356241!10541-107H1;0.390741!10842-111E5;0.701201!10562-108A4;0.329302!10024-101D6;0.517437!10064-101I1;0.703562!10609-108F6;0.474252!10048-101G3;0.454964!10781-110G7;0.362885!10181-103D1;0.826641!10159-103A6;0.0201912!10056-101H2;0.0484084!10737-110B8;0.0308872!10025-101D7;0.329281!10044-101F8;0.0740701!10424-106D1;0.324973!10463-106H4;0.859579!10616-108G4;0.190574!10486-107A9;0.0847295!10062-101H8;0.0430108!10202-103F4;0.167469!10158-103A5;0.874622!10441-106E9;0.205366!10031-101E4;0.21343!10063-101H9;0.0388387!10063-101H9;0.100916!11763-123H8;0.299463!11765-123I1;0.966176!11768-123I4;0.81766!10807-111A6;0.712649!10790-110H7;0.408573!10798-110I6;0.218517!10786-110H3;0.103535!10591-108D6;0.566892!10593-108D8;0.777983!10590-108D5;0.766564!10026-101D8;0.338203!10096-102C6;0.995144!10168-103B6;0.00900193!10154-103A1;0.0597241!10209-103G2;0.0621223!10061-101H7;0.677162!10027-101D9;0.644552!10043-101F7;0.667417!10783-110G9;0.283047!10028-101E1;0.7649!10060-101H6;0.484807!10203-103F5;0.625689!10059-101H5;0.981076!10047-101G2;0.998284!10029-101E2;0.287853!10058-101H4;0.206136!10418-106C4;0.563888!10492-107B6;0.539014!10694-109G1;0.732744!10797-110I5;0.945913!10057-101H3;0.116521!10100-102D1;0.231436!10055-101H1;0.367472!10204-103F6;0.494817!10191-103E2;0.227797!10563-108A5;0.160616
|name=motif_TTGCAN
|name=motif_TTGCAN
|tomtom_result=Ddit3::Cebpa#MA0019.1;4;0.00032779;0.156028;0.312056;6;TTGCAA;GGGATTGCATCT;-!slbo#MA0244.1;1;0.0016187;0.770501;0.770501;6;TTGCAA;ATTGCAAA;+!Sox2#MA0143.1;1;0.00580723;2.76424;1;6;TTGCAA;TTTGCATAACAAAGG;-!CEBPA#MA0102.2;1;0.00634395;3.01972;1;6;TTGCAA;ATTGCGAAA;-!nub#MA0453.1;5;0.00636317;3.02887;1;6;TTGCAA;CTAATTTGCATA;-!Pou5f1#MA0142.1;2;0.00650975;3.09864;1;6;TTGCAA;ATTTGCATAACAAAG;-!Cebpa#MA0102.1;4;0.0104014;4.95106;1;6;TTGCAA;GAGATTGCGAAA;-!AFT1#MA0269.1;7;0.0151811;7.22621;1;6;TTGCAA;TTACATATTGCACCCGATTGG;+
}}
}}

Latest revision as of 13:54, 7 September 2012

Full Name: motif_TTGCAN

Motif matrix
POACGT
0100014688
0200014688
0300146880
0401468800
0514688000
063672367236723672

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Ddit3::Cebpa#MA0019.140.000327790.1560280.3120566TTGCAAGGGATTGCATCT-
slbo#MA0244.110.00161870.7705010.7705016TTGCAAATTGCAAA+
Sox2#MA0143.110.005807232.7642416TTGCAATTTGCATAACAAAGG-
CEBPA#MA0102.210.006343953.0197216TTGCAAATTGCGAAA-
nub#MA0453.150.006363173.0288716TTGCAACTAATTTGCATA-
Pou5f1#MA0142.120.006509753.0986416TTGCAAATTTGCATAACAAAG-
Cebpa#MA0102.140.01040144.9510616TTGCAAGAGATTGCGAAA-
AFT1#MA0269.170.01518117.2262116TTGCAATTACATATTGCACCCGATTGG+
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