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MCL coexpression mm9:75: Difference between revisions

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{{MCL_coexpression_mm9|gostat_on_MCL_coexpression=GO:0008544;epidermis development;4.37505799626704e-08;67855,14027,64929,16939,21816,12023,230824,110308,19041!GO:0007398;ectoderm development;4.37505799626704e-08;67855,14027,64929,16939,21816,12023,230824,110308,19041!GO:0009888;tissue development;1.96428993550715e-05;67855,666279,14027,64929,21816,16939,12023,230824,110308,19041!GO:0030057;desmosome;2.53581179068666e-05;386463,13510,225256,13505!GO:0008233;peptidase activity;0.000114933984441675;209232,16613,67855,71791,226418,72432,20725,75221,15925,70008,13648,18788,243083!GO:0016787;hydrolase activity;0.000114933984441675;271844,16613,67855,71791,226418,20725,75221,271457,70008,66198,18788,209232,433091,71884,72432,15925,240633,403178,24102,13648,243083!GO:0030054;cell junction;0.000143025842598808;13510,18772,14027,386463,64058,21816,12821,225256,13505,19041!GO:0031424;keratinization;0.000214087444236872;14027,21816,16939,19041!GO:0009913;epidermal cell differentiation;0.000554772196953506;14027,21816,16939,19041!GO:0014704;intercalated disc;0.00138032072496803;386463,13510,225256,13505!GO:0048730;epidermis morphogenesis;0.00176392650888208;14027,21816,16939,19041!GO:0048729;tissue morphogenesis;0.00808970761995868;14027,21816,16939,19041!GO:0003810;protein-glutamine gamma-glutamyltransferase activity;0.00808970761995868;74176,21816!GO:0018149;peptide cross-linking;0.00808970761995868;74176,21816!GO:0005911;intercellular junction;0.00930381502823334;386463,13510,21816,225256,13505!GO:0001726;ruffle;0.00930381502823334;271457,67425,14457!GO:0016165;lipoxygenase activity;0.00930381502823334;23801,11686!GO:0043296;apical junction complex;0.010602239102886;386463,13510,225256,13505!GO:0016327;apicolateral plasma membrane;0.0109428847960425;386463,13510,225256,13505!GO:0044459;plasma membrane part;0.0129403618494906;13510,18772,320718,14027,271457,64058,386463,21816,12821,16939,67516,225256,19041,13505!GO:0004867;serine-type endopeptidase inhibitor activity;0.0153275580725187;71869,72432,20725,18788!GO:0016755;transferase activity, transferring amino-acyl groups;0.0223162804335706;74176,21816!GO:0004293;tissue kallikrein activity;0.0251646083949542;16613,13648!GO:0019370;leukotriene biosynthetic process;0.035111495357553;23801,11686!GO:0043450;alkene biosynthetic process;0.035111495357553;23801,11686!GO:0022610;biological adhesion;0.035111495357553;13510,18772,72432,64058,12821,225256,72434,13505!GO:0007155;cell adhesion;0.035111495357553;13510,18772,72432,64058,12821,225256,72434,13505!GO:0006691;leukotriene metabolic process;0.0356860640717871;23801,11686!GO:0043449;alkene metabolic process;0.0376507214843083;23801,11686!GO:0006508;proteolysis;0.0376507214843083;16613,67855,71791,72432,75221,15925,13648,243083!GO:0004866;endopeptidase inhibitor activity;0.0376507214843083;71869,72432,20725,18788!GO:0030414;protease inhibitor activity;0.0393279550420495;71869,72432,20725,18788!GO:0005509;calcium ion binding;0.0455591662483469;74176,271844,13510,69543,21816,666279,225256,13505,70405!GO:0031252;leading edge;0.0480286345623551;271457,67425,14457!GO:0046456;icosanoid biosynthetic process;0.0480286345623551;23801,11686!GO:0051015;actin filament binding;0.0480286345623551;67425,14457!GO:0004231;insulysin activity;0.0480286345623551;15925!GO:0043758;acetate-CoA ligase (ADP-forming) activity;0.0480286345623551;14081!GO:0030280;structural constituent of epidermis;0.0480286345623551;16939!GO:0017039;dipeptidyl-peptidase III activity;0.0480286345623551;75221!}}
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development;4.37505799626704e-08;67855,14027,64929,16939,21816,12023,230824,110308,19041!GO:0007398;ectoderm development;4.37505799626704e-08;67855,14027,64929,16939,21816,12023,230824,110308,19041!GO:0009888;tissue development;1.96428993550715e-05;67855,666279,14027,64929,21816,16939,12023,230824,110308,19041!GO:0030057;desmosome;2.53581179068666e-05;386463,13510,225256,13505!GO:0008233;peptidase activity;0.000114933984441675;209232,16613,67855,71791,226418,72432,20725,75221,15925,70008,13648,18788,243083!GO:0016787;hydrolase activity;0.000114933984441675;271844,16613,67855,71791,226418,20725,75221,271457,70008,66198,18788,209232,433091,71884,72432,15925,240633,403178,24102,13648,243083!GO:0030054;cell junction;0.000143025842598808;13510,18772,14027,386463,64058,21816,12821,225256,13505,19041!GO:0031424;keratinization;0.000214087444236872;14027,21816,16939,19041!GO:0009913;epidermal cell differentiation;0.000554772196953506;14027,21816,16939,19041!GO:0014704;intercalated disc;0.00138032072496803;386463,13510,225256,13505!GO:0048730;epidermis morphogenesis;0.00176392650888208;14027,21816,16939,19041!GO:0048729;tissue morphogenesis;0.00808970761995868;14027,21816,16939,19041!GO:0003810;protein-glutamine gamma-glutamyltransferase activity;0.00808970761995868;74176,21816!GO:0018149;peptide cross-linking;0.00808970761995868;74176,21816!GO:0005911;intercellular junction;0.00930381502823334;386463,13510,21816,225256,13505!GO:0001726;ruffle;0.00930381502823334;271457,67425,14457!GO:0016165;lipoxygenase activity;0.00930381502823334;23801,11686!GO:0043296;apical junction complex;0.010602239102886;386463,13510,225256,13505!GO:0016327;apicolateral plasma membrane;0.0109428847960425;386463,13510,225256,13505!GO:0044459;plasma membrane part;0.0129403618494906;13510,18772,320718,14027,271457,64058,386463,21816,12821,16939,67516,225256,19041,13505!GO:0004867;serine-type endopeptidase inhibitor activity;0.0153275580725187;71869,72432,20725,18788!GO:0016755;transferase activity, transferring amino-acyl groups;0.0223162804335706;74176,21816!GO:0004293;tissue kallikrein activity;0.0251646083949542;16613,13648!GO:0019370;leukotriene biosynthetic process;0.035111495357553;23801,11686!GO:0043450;alkene biosynthetic process;0.035111495357553;23801,11686!GO:0022610;biological adhesion;0.035111495357553;13510,18772,72432,64058,12821,225256,72434,13505!GO:0007155;cell adhesion;0.035111495357553;13510,18772,72432,64058,12821,225256,72434,13505!GO:0006691;leukotriene metabolic process;0.0356860640717871;23801,11686!GO:0043449;alkene metabolic process;0.0376507214843083;23801,11686!GO:0006508;proteolysis;0.0376507214843083;16613,67855,71791,72432,75221,15925,13648,243083!GO:0004866;endopeptidase inhibitor activity;0.0376507214843083;71869,72432,20725,18788!GO:0030414;protease inhibitor activity;0.0393279550420495;71869,72432,20725,18788!GO:0005509;calcium ion binding;0.0455591662483469;74176,271844,13510,69543,21816,666279,225256,13505,70405!GO:0031252;leading edge;0.0480286345623551;271457,67425,14457!GO:0046456;icosanoid biosynthetic process;0.0480286345623551;23801,11686!GO:0051015;actin filament binding;0.0480286345623551;67425,14457!GO:0004231;insulysin activity;0.0480286345623551;15925!GO:0043758;acetate-CoA ligase (ADP-forming) activity;0.0480286345623551;14081!GO:0030280;structural constituent of epidermis;0.0480286345623551;16939!GO:0017039;dipeptidyl-peptidase III activity;0.0480286345623551;75221!|ontology_enrichment_celltype=|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000014!1.25e-09!5;UBERON:0001003!1.25e-09!5;UBERON:0002097!1.25e-09!5;UBERON:0002199!1.25e-09!5;UBERON:0007029!1.25e-09!5;UBERON:0007376!1.25e-09!5;UBERON:0002416!1.25e-09!5;UBERON:0007383!1.25e-09!5|tfbs_overrepresentation_for_novel_motifs=0.0903608,0.645898,1.08314,0.161057,0.295736,0.552509,0.196031,0.232128,0.443902,0.0745462,0.31085,0.0206479,0.233387,0.0290878,0.6075,0,0.0288064,0.25935,0.269635,1.67292,0.773866,0.203809,0.0287358,0.59298,0.351156,0.0907705,1.10715,0.240787,1.6186,1.03027,0.0741747,0.0665818,0.420699,1.34301,0.0425793,0.598353,0.364298,0.558644,0.249253,1.28095,0.276938,0.324394,1.96834,0.299811,0.333544,0.0837433,0.197409,0.282298,1.38372,0.57461,0.166778,0.118919,0.688591,0.0400328,0.385509,0.0319821,1.33506,0.152436,0.612353,0.230438,0.527106,0.0238469,1.05659,0.153399,0.565818,0.365211,0.301335,0.77475,0.515329,0.18982,0.253253,0.507066,0.000221976,0.199014,0.00588551,2.41878,1.1924,0.0910017,0.138207,1.17384,1.85657,0.0990551,0.128211,0.0237897,0.0260457,2.7004e-05,0.0203781,1.16533,0.205,0.403004,0.381754,0.113239,0.369351,0.528459,0.0222797,1.0634,2.25391,0.0743025,0.1978,0.148725,0.461439,0.345492,0.142767,0.494435,0.166219,0.018099,0.247727,1.15194,0.0178644,0.0298575,1.0472,0.0362727,0.0574337,1.05159,0.123428,0.559988,0.054217,0.845113,0.190493,0.435725,0.203871,0.130232,0.0925288,0.307263,0.897044,0.493486,0.0275118,0.0148787,1.04234,1.75588,0.563418,0.327968,0.0778818,0.0134785,0.417141,0.0320949,1.18165,0.328913,0.110719,0.715096,0.378457,0.0917491,0.31248,0.606879,0.158461,0.0183796,0.523824,2.74289,0.168492,0.394534,0.621804,1.14518e-06,0.157393,0.311747,1.90368,0.228933,0.120066,0.852179,1.54371,0.0307684,0.368502,0.10944,0.494581,1.7196,0.286129,0.543173,3.19884,1.50484,0.840096|tfbs_overrepresentation_jaspar=MA0003.1;0.000585908,MA0004.1;0.0986669,MA0006.1;0.0378654,MA0007.1;0.303724,MA0009.1;1.33674,MA0014.1;0.00715778,MA0017.1;0.0230026,MA0019.1;0.839275,MA0024.1;0.157257,MA0025.1;0.0762252,MA0027.1;1.18416,MA0028.1;0.00743963,MA0029.1;0.0495367,MA0030.1;0.290104,MA0031.1;0.234704,MA0038.1;0.423786,MA0040.1;0.218796,MA0041.1;0.00559549,MA0042.1;0.00984954,MA0043.1;0.142016,MA0046.1;0.0233559,MA0048.1;0.298918,MA0050.1;0.16022,MA0051.1;0.183208,MA0052.1;0.228508,MA0055.1;3.97418,MA0056.1;0,MA0057.1;0.012646,MA0058.1;0.00833912,MA0059.1;0.0450911,MA0060.1;0.101784,MA0061.1;0.045281,MA0063.1;0,MA0066.1;0.0360557,MA0067.1;0.388781,MA0068.1;0.117139,MA0069.1;0.0208374,MA0070.1;0.217253,MA0071.1;0.36354,MA0072.1;0.207316,MA0073.1;0.00790239,MA0074.1;0.427285,MA0076.1;0.000456441,MA0077.1;0.0702307,MA0078.1;0.0255065,MA0081.1;0.174789,MA0083.1;0.141424,MA0084.1;0.321696,MA0087.1;0.111308,MA0088.1;0.0309949,MA0089.1;0,MA0090.1;0.782072,MA0091.1;0.0335008,MA0092.1;0.470589,MA0093.1;0.0580788,MA0095.1;0,MA0098.1;0,MA0100.1;0.0917639,MA0101.1;0.0286115,MA0103.1;1.91471,MA0105.1;0.852028,MA0106.1;0.406461,MA0107.1;0.045634,MA0108.2;0.278569,MA0109.1;0,MA0111.1;0.697553,MA0113.1;0.331324,MA0114.1;0.138767,MA0115.1;0.144116,MA0116.1;0.572967,MA0117.1;0.120938,MA0119.1;0.684326,MA0122.1;0.910727,MA0124.1;0.326114,MA0125.1;0.247207,MA0130.1;0,MA0131.1;0.120516,MA0132.1;0,MA0133.1;0,MA0135.1;0.686288,MA0136.1;0.00997512,MA0139.1;0.0404792,MA0140.1;0.260769,MA0141.1;1.2642,MA0142.1;0.0342298,MA0143.1;0.00649933,MA0144.1;0.932392,MA0145.1;1.89411,MA0146.1;0.494164,MA0147.1;0.00329624,MA0148.1;0.0694854,MA0149.1;0.0155339,MA0062.2;1.86518e-06,MA0035.2;0.170492,MA0039.2;1.82845,MA0138.2;0.364407,MA0002.2;1.33591,MA0137.2;0.56115,MA0104.2;0.00141317,MA0047.2;0.0409185,MA0112.2;0.0684597,MA0065.2;0.323426,MA0150.1;0.207637,MA0151.1;0,MA0152.1;0.811199,MA0153.1;0.049201,MA0154.1;1.09587,MA0155.1;0.208593,MA0156.1;0.0187257,MA0157.1;0.313515,MA0158.1;0,MA0159.1;0.303697,MA0160.1;0.753076,MA0161.1;0,MA0162.1;0.00633919,MA0163.1;0.0254033,MA0164.1;0.130167,MA0080.2;0.118113,MA0018.2;0.0754108,MA0099.2;2.44162,MA0079.2;5.92363e-07,MA0102.2;0.360273,MA0258.1;0.329924,MA0259.1;0.0173239,MA0442.1;0}}

Latest revision as of 14:38, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:127335594..127335605,+p3@Sdr9c7
Mm9::chr10:127335606..127335611,+p6@Sdr9c7
Mm9::chr10:18265577..18265584,-p@chr10:18265577..18265584
-
Mm9::chr10:18265599..18265612,-p4@Hebp2
Mm9::chr10:18265686..18265737,-p1@Hebp2
Mm9::chr10:18265822..18265836,-p3@Hebp2
Mm9::chr10:18564930..18564945,+p1@Perp
Mm9::chr10:43868593..43868610,-p@chr10:43868593..43868610
-
Mm9::chr10:6511612..6511629,-p@chr10:6511612..6511629
-
Mm9::chr11:116099397..116099411,-p1@Evpl
Mm9::chr11:20731176..20731192,-p2@1110067D22Rik
Mm9::chr11:46036104..46036128,+p@chr11:46036104..46036128
+
Mm9::chr11:67346577..67346593,+p8@Gas7
Mm9::chr11:68939606..68939618,+p4@Aloxe3
Mm9::chr11:68939688..68939712,+p2@Aloxe3
Mm9::chr11:68939720..68939751,+p1@Aloxe3
Mm9::chr11:68970390..68970403,+p4@Alox12b
Mm9::chr11:68970415..68970418,+p7@Alox12b
Mm9::chr11:68970534..68970553,+p1@Alox12b
Mm9::chr11:68970555..68970563,+p5@Alox12b
Mm9::chr11:68970565..68970583,+p2@Alox12b
Mm9::chr11:68970586..68970612,+p3@Alox12b
Mm9::chr11:70354393..70354409,+p@chr11:70354393..70354409
+
Mm9::chr11:70354413..70354420,+p@chr11:70354413..70354420
+
Mm9::chr12:113368990..113368996,+p1@Mir203
Mm9::chr12:72990525..72990543,+p4@Daam1
Mm9::chr13:3802531..3802537,-p@chr13:3802531..3802537
-
Mm9::chr13:3803460..3803485,-p2@Calml3
Mm9::chr13:38243240..38243262,+p1@Dsp
Mm9::chr14:103912595..103912646,+p2@Scel
Mm9::chr14:21427093..21427122,-p@chr14:21427093..21427122
-
Mm9::chr14:35168569..35168587,-p1@Fam25c
Mm9::chr14:56332319..56332340,-p1@Tgm1
Mm9::chr14:70946282..70946293,+p@chr14:70946282..70946293
+
Mm9::chr14:76354818..76354823,+p2@Kctd4
Mm9::chr14:76354857..76354870,+p1@Kctd4
Mm9::chr15:101179878..101179883,-p@chr15:101179878..101179883
-
Mm9::chr15:101537980..101537994,-p@chr15:101537980..101537994
-
Mm9::chr15:101538012..101538024,-p@chr15:101538012..101538024
-
Mm9::chr15:101540044..101540058,-p@chr15:101540044..101540058
-
Mm9::chr15:101540268..101540287,-p@chr15:101540268..101540287
-
Mm9::chr15:101784680..101784696,-p2@Krt78
p2@LOC100505154
Mm9::chr15:63640288..63640300,-p1@Gsdmc
Mm9::chr15:74577218..74577227,-p3@2300005B03Rik
Mm9::chr16:25286896..25286912,+p1@Tprg
Mm9::chr16:25286934..25286960,+p2@Tprg
Mm9::chr16:5132551..5132576,-p1@Ppl
Mm9::chr16:56867774..56867783,-p@chr16:56867774..56867783
-
Mm9::chr17:28995510..28995518,+p3@Pnpla1
Mm9::chr17:32326384..32326395,-p2@Ephx3
Mm9::chr17:32326402..32326421,-p1@Ephx3
Mm9::chr17:32589664..32589676,+p2@Cyp4f39
Mm9::chr17:32589690..32589702,+p1@Cyp4f39
Mm9::chr17:35205804..35205830,+p@chr17:35205804..35205830
+
Mm9::chr17:35206317..35206331,+p@chr17:35206317..35206331
+
Mm9::chr17:35689112..35689127,+p1@Cdsn
Mm9::chr17:35693265..35693300,+p@chr17:35693265..35693300
+
Mm9::chr17:53618852..53618863,+p7@Rab5a
Mm9::chr17:72130582..72130593,+p4@Clip4
Mm9::chr17:72130615..72130624,+p3@Clip4
Mm9::chr17:72130627..72130646,+p2@Clip4
Mm9::chr18:20273140..20273172,-p2@Dsc1
Mm9::chr18:20273174..20273190,-p3@Dsc1
Mm9::chr18:20273203..20273214,-p6@Dsc1
Mm9::chr18:20273268..20273283,-p4@Dsc1
Mm9::chr18:20273294..20273314,-p1@Dsc1
Mm9::chr18:20273355..20273366,-p5@Dsc1
Mm9::chr18:20273375..20273384,-p7@Dsc1
Mm9::chr18:20469424..20469430,+p1@Dsg1a
Mm9::chr18:20535340..20535347,+p1@Dsg1b
Mm9::chr18:44122888..44122906,+p1@Spink5
Mm9::chr19:10799791..10799801,-p@chr19:10799791..10799801
-
Mm9::chr19:34082774..34082785,+p3@Lipk
Mm9::chr19:37412335..37412343,-p1@Ide
Mm9::chr19:47490678..47490692,-p@chr19:47490678..47490692
-
Mm9::chr19:47766338..47766365,-p3@Col17a1
Mm9::chr19:47766374..47766394,-p4@Col17a1
Mm9::chr19:47766399..47766402,-p7@Col17a1
Mm9::chr19:4927313..4927326,-p@chr19:4927313..4927326
-
Mm9::chr1:108831057..108831071,+p4@Serpinb12
Mm9::chr1:108835530..108835535,+p2@Serpinb12
Mm9::chr1:109059807..109059816,-p@chr1:109059807..109059816
-
Mm9::chr1:109408040..109408045,+p5@Serpinb2
Mm9::chr1:109408066..109408079,+p2@Serpinb2
Mm9::chr1:109486635..109486690,+p2@Serpinb8
Mm9::chr1:132613897..132613910,+p1@Yod1
Mm9::chr1:133646958..133646963,+p4@Slc26a9
Mm9::chr1:136007810..136007825,+p1@Chit1
Mm9::chr1:137715302..137715316,+p5@Lad1
Mm9::chr1:137815701..137815712,-p5@Pkp1
Mm9::chr1:137815741..137815752,-p3@Pkp1
Mm9::chr1:137815776..137815789,-p1@Pkp1
Mm9::chr1:137815871..137815884,-p4@Pkp1
Mm9::chr1:137815898..137815916,-p2@Pkp1
Mm9::chr1:137815919..137815930,-p6@Pkp1
Mm9::chr1:137815931..137815936,-p7@Pkp1
Mm9::chr1:166237312..166237323,-p4@Blzf1
Mm9::chr1:40382431..40382454,+p@chr1:40382431..40382454
+
Mm9::chr2:119859189..119859202,+p2@Jmjd7
p2@Pla2g4b
Mm9::chr2:120139817..120139842,-p2@Pla2g4f
Mm9::chr2:120139851..120139872,-p3@Pla2g4f
Mm9::chr2:120911482..120911489,-p4@Tgm5
Mm9::chr2:120911514..120911530,-p1@Tgm5
Mm9::chr2:157822882..157822915,-p@chr2:157822882..157822915
-
Mm9::chr2:164008465..164008502,-p1@Wfdc5
Mm9::chr2:24008668..24008685,+p2@Il1f8
Mm9::chr2:25095370..25095390,-p1@2310002J15Rik
Mm9::chr2:25097423..25097446,+p3@Rnf208
Mm9::chr3:14644912..14644941,+p@chr3:14644912..14644941
+
Mm9::chr3:58998953..58998976,-p2@Gpr87
Mm9::chr3:59810784..59810801,+p1@Aadacl2
Mm9::chr3:91884223..91884269,-p@chr3:91884223..91884269
-
Mm9::chr3:91884835..91884853,-p@chr3:91884835..91884853
-
Mm9::chr3:91885275..91885288,-p@chr3:91885275..91885288
-
Mm9::chr3:91887054..91887069,-p1@Lor
Mm9::chr3:91917108..91917121,+p@chr3:91917108..91917121
+
Mm9::chr3:92451302..92451307,-p@chr3:92451302..92451307
-
Mm9::chr3:92628957..92628968,-p@chr3:92628957..92628968
-
Mm9::chr3:92631161..92631179,-p1@Kprp
Mm9::chr3:92819601..92819616,-p1@Crct1
Mm9::chr3:94146014..94146034,+p1@Them5
Mm9::chr4:123797763..123797785,-p@chr4:123797763..123797785
-
Mm9::chr4:132807268..132807303,+p@chr4:132807268..132807303
+
Mm9::chr4:132807325..132807336,+p@chr4:132807325..132807336
+
Mm9::chr4:135129447..135129467,-p2@Grhl3
Mm9::chr4:135129538..135129558,-p1@Grhl3
Mm9::chr4:139130612..139130640,+p2@Iffo2
Mm9::chr4:148913973..148913987,+p@chr4:148913973..148913987
+
Mm9::chr4:155602613..155602647,-p1@Plekhn1
Mm9::chr4:41083125..41083136,+p@chr4:41083125..41083136
+
Mm9::chr5:110529433..110529444,+p1@Plcxd1
Mm9::chr5:137432569..137432579,-p@chr5:137432569..137432579
-
Mm9::chr5:144374290..144374303,-p@chr5:144374290..144374303
-
Mm9::chr5:149363786..149363797,-p@chr5:149363786..149363797
-
Mm9::chr5:149363827..149363849,-p@chr5:149363827..149363849
-
Mm9::chr5:87061403..87061416,-p1@Tmprss11f
Mm9::chr6:116308974..116308991,+p@chr6:116308974..116308991
+
Mm9::chr6:30518367..30518382,+p1@Cpa4
Mm9::chr6:86578219..86578235,+p@chr6:86578219..86578235
+
Mm9::chr7:134705244..134705256,+p2@uc009jvz.1
Mm9::chr7:13512736..13512751,+p2@2310014L17Rik
Mm9::chr7:13512759..13512788,+p1@2310014L17Rik
Mm9::chr7:16870775..16870789,-p4@Ccdc9
Mm9::chr7:16870803..16870828,-p3@Ccdc9
Mm9::chr7:20102969..20102980,+p@chr7:20102969..20102980
+
Mm9::chr7:20103243..20103265,+p@chr7:20103243..20103265
+
Mm9::chr7:25134229..25134246,+p2@Lypd5
Mm9::chr7:25421563..25421583,+p1@Lypd3
Mm9::chr7:25421585..25421608,+p2@Lypd3
Mm9::chr7:26153100..26153115,-p@chr7:26153100..26153115
-
Mm9::chr7:26154067..26154134,-p@chr7:26154067..26154134
-
Mm9::chr7:29414713..29414732,-p@chr7:29414713..29414732
-
Mm9::chr7:29414741..29414760,-p@chr7:29414741..29414760
-
Mm9::chr7:29414771..29414782,-p@chr7:29414771..29414782
-
Mm9::chr7:29414811..29414821,-p@chr7:29414811..29414821
-
Mm9::chr7:4416931..4416977,+p3@Eps8l1
Mm9::chr7:51029978..51029992,+p1@Klk11
Mm9::chr7:51029994..51030006,+p3@Klk11
Mm9::chr7:51030012..51030018,+p5@Klk11
Mm9::chr7:51030022..51030034,+p4@Klk11
Mm9::chr7:51031636..51031668,+p2@Klk11
Mm9::chr7:51047321..51047352,+p1@Klk9
Mm9::chr7:51049513..51049525,+p@chr7:51049513..51049525
+
Mm9::chr7:73888573..73888592,+p@chr7:73888573..73888592
+
Mm9::chr7:99329188..99329244,+p3@Dlg2
Mm9::chr8:107485687..107485698,+p@chr8:107485687..107485698
+
Mm9::chr8:129695291..129695307,+p@chr8:129695291..129695307
+
Mm9::chr8:47576273..47576284,+p10@Acsl1
Mm9::chr8:71551549..71551592,-p@chr8:71551549..71551592
-
Mm9::chr8:95425337..95425346,+p5@Capns2
Mm9::chr8:95425347..95425365,+p2@Capns2
Mm9::chr9:107191722..107191753,-p2@Mapkapk3
Mm9::chr9:31720746..31720762,-p4@Barx2
Mm9::chr9:31923591..31923617,+p5@Arhgap32
Mm9::chr9:98386486..98386525,+p@chr9:98386486..98386525
+
Mm9::chrX:160577253..160577269,+p6@Ace2
Mm9::chrX:160577282..160577301,+p5@Ace2
Mm9::chrX:70680671..70680689,-p1@Trex2


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0008544epidermis development4.37505799626704e-08
GO:0007398ectoderm development4.37505799626704e-08
GO:0009888tissue development1.96428993550715e-05
GO:0030057desmosome2.53581179068666e-05
GO:0008233peptidase activity0.000114933984441675
GO:0016787hydrolase activity0.000114933984441675
GO:0030054cell junction0.000143025842598808
GO:0031424keratinization0.000214087444236872
GO:0009913epidermal cell differentiation0.000554772196953506
GO:0014704intercalated disc0.00138032072496803
GO:0048730epidermis morphogenesis0.00176392650888208
GO:0048729tissue morphogenesis0.00808970761995868
GO:0003810protein-glutamine gamma-glutamyltransferase activity0.00808970761995868
GO:0018149peptide cross-linking0.00808970761995868
GO:0005911intercellular junction0.00930381502823334
GO:0001726ruffle0.00930381502823334
GO:0016165lipoxygenase activity0.00930381502823334
GO:0043296apical junction complex0.010602239102886
GO:0016327apicolateral plasma membrane0.0109428847960425
GO:0044459plasma membrane part0.0129403618494906
GO:0004867serine-type endopeptidase inhibitor activity0.0153275580725187
GO:0016755transferase activity, transferring amino-acyl groups0.0223162804335706
GO:0004293tissue kallikrein activity0.0251646083949542
GO:0019370leukotriene biosynthetic process0.035111495357553
GO:0043450alkene biosynthetic process0.035111495357553
GO:0022610biological adhesion0.035111495357553
GO:0007155cell adhesion0.035111495357553
GO:0006691leukotriene metabolic process0.0356860640717871
GO:0043449alkene metabolic process0.0376507214843083
GO:0006508proteolysis0.0376507214843083
GO:0004866endopeptidase inhibitor activity0.0376507214843083
GO:0030414protease inhibitor activity0.0393279550420495
GO:0005509calcium ion binding0.0455591662483469
GO:0031252leading edge0.0480286345623551
GO:0046456icosanoid biosynthetic process0.0480286345623551
GO:0051015actin filament binding0.0480286345623551
GO:0004231insulysin activity0.0480286345623551
GO:0043758acetate-CoA ligase (ADP-forming) activity0.0480286345623551
GO:0030280structural constituent of epidermis0.0480286345623551
GO:0017039dipeptidyl-peptidase III activity0.0480286345623551



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
zone of skin1.25e-095
skin epidermis1.25e-095
skin of body1.25e-095
integument1.25e-095
surface1.25e-095
outer epithelium1.25e-095
integumental system1.25e-095
enveloping layer of ectoderm1.25e-095


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10.000585908
MA0004.10.0986669
MA0006.10.0378654
MA0007.10.303724
MA0009.11.33674
MA0014.10.00715778
MA0017.10.0230026
MA0019.10.839275
MA0024.10.157257
MA0025.10.0762252
MA0027.11.18416
MA0028.10.00743963
MA0029.10.0495367
MA0030.10.290104
MA0031.10.234704
MA0038.10.423786
MA0040.10.218796
MA0041.10.00559549
MA0042.10.00984954
MA0043.10.142016
MA0046.10.0233559
MA0048.10.298918
MA0050.10.16022
MA0051.10.183208
MA0052.10.228508
MA0055.13.97418
MA0056.10
MA0057.10.012646
MA0058.10.00833912
MA0059.10.0450911
MA0060.10.101784
MA0061.10.045281
MA0063.10
MA0066.10.0360557
MA0067.10.388781
MA0068.10.117139
MA0069.10.0208374
MA0070.10.217253
MA0071.10.36354
MA0072.10.207316
MA0073.10.00790239
MA0074.10.427285
MA0076.10.000456441
MA0077.10.0702307
MA0078.10.0255065
MA0081.10.174789
MA0083.10.141424
MA0084.10.321696
MA0087.10.111308
MA0088.10.0309949
MA0089.10
MA0090.10.782072
MA0091.10.0335008
MA0092.10.470589
MA0093.10.0580788
MA0095.10
MA0098.10
MA0100.10.0917639
MA0101.10.0286115
MA0103.11.91471
MA0105.10.852028
MA0106.10.406461
MA0107.10.045634
MA0108.20.278569
MA0109.10
MA0111.10.697553
MA0113.10.331324
MA0114.10.138767
MA0115.10.144116
MA0116.10.572967
MA0117.10.120938
MA0119.10.684326
MA0122.10.910727
MA0124.10.326114
MA0125.10.247207
MA0130.10
MA0131.10.120516
MA0132.10
MA0133.10
MA0135.10.686288
MA0136.10.00997512
MA0139.10.0404792
MA0140.10.260769
MA0141.11.2642
MA0142.10.0342298
MA0143.10.00649933
MA0144.10.932392
MA0145.11.89411
MA0146.10.494164
MA0147.10.00329624
MA0148.10.0694854
MA0149.10.0155339
MA0062.21.86518e-06
MA0035.20.170492
MA0039.21.82845
MA0138.20.364407
MA0002.21.33591
MA0137.20.56115
MA0104.20.00141317
MA0047.20.0409185
MA0112.20.0684597
MA0065.20.323426
MA0150.10.207637
MA0151.10
MA0152.10.811199
MA0153.10.049201
MA0154.11.09587
MA0155.10.208593
MA0156.10.0187257
MA0157.10.313515
MA0158.10
MA0159.10.303697
MA0160.10.753076
MA0161.10
MA0162.10.00633919
MA0163.10.0254033
MA0164.10.130167
MA0080.20.118113
MA0018.20.0754108
MA0099.22.44162
MA0079.25.92363e-07
MA0102.20.360273
MA0258.10.329924
MA0259.10.0173239
MA0442.10
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