FFCP PHASE1:Hg19::chr2:128398152..128398168,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:128398152..128398168,-
|short_description=p15@LIMS2
|description=CAGE_peak_15_at_LIMS2_5end
|association_with_transcript=-174bp_to_ENST00000494613_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55679 | |EntrezGene=55679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |HGNC=16084 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-174bp_to_ENST00000494613_5end | |||
|cluster_id=chr2:128398152..128398168,- | |||
|coexpression_cluster_id=C419 | |||
|description=CAGE_peak_15_at_LIMS2_5end | |||
|id=chr2:128398152..128398168,- | |||
|ontology_enrichment_celltype=CL:0000542!1.08e-12!53;CL:0000051!1.08e-12!53;CL:0000838!4.25e-12!52;CL:0000624!3.18e-08!6;CL:0000084!1.52e-07!25;CL:0000827!1.52e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000785;8.47e-07;1!CL:0002591;8.47e-07;1!CL:0000895;8.47e-07;1!CL:0000819;8.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,4.78e-07,1;CL:0000895,4.78e-07,1;CL:0002436,4.78e-07,1;CL:0002427,4.78e-07,1;CL:0002428,4.78e-07,1;CL:0002429,4.78e-07,1;CL:0002433,4.78e-07,1;CL:0002431,4.78e-07,1;CL:0002432,4.78e-07,1;CL:0000819,7.15e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002427;8.47e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.47e-07;1!DOID:8675;8.47e-07;1!DOID:6193;8.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.38e-07,1;DOID:0060073,7.15e-07,1;DOID:8675,7.15e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003351,8.03e-09,6 | |||
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| ||
|short_description=p15@LIMS2 | |||
}} | }} |
Latest revision as of 20:56, 16 September 2015
Short description: | p15@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LIMS2_5end |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | -174bp_to_ENST00000494613_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 4.78e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.78e-07 | 1 |
mature CD4 single-positive thymocyte | 4.78e-07 | 1 |
resting double-positive thymocyte | 4.78e-07 | 1 |
double-positive blast | 4.78e-07 | 1 |
CD69-positive double-positive thymocyte | 4.78e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 4.78e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.78e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 4.78e-07 | 1 |
B-1 B cell | 7.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pharyngeal epithelium | 8.03e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.38e-07 | 1 |
lymphatic system cancer | 7.15e-07 | 1 |
lymphosarcoma | 7.15e-07 | 1 |