FFCP PHASE1:Mm9::chr5:36717523..36717532,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |MCL_coexpression_id=105 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:36717523..36717532,+ | |||
|description=CAGE_peak_at_chr5:36717523..36717532,+ | |description=CAGE_peak_at_chr5:36717523..36717532,+ | ||
|id=chr5:36717523..36717532,+ | |id=chr5:36717523..36717532,+ | ||
|ontology_enrichment_celltype=CL:0002250!1.28e-16!3;CL:0002563!3.54e-14!9;CL:0002251!3.54e-14!9;CL:0000066!4.48e-12!25;CL:0002076!7.94e-12!15;CL:0000223!9.35e-09!20;CL:0000473!1.13e-07!3;CL:0000627!1.13e-07!3;CL:0000682!1.13e-07!3 | |ontology_enrichment_celltype=CL:0002250!1.28e-16!3;CL:0002563!3.54e-14!9;CL:0002251!3.54e-14!9;CL:0000066!4.48e-12!25;CL:0002076!7.94e-12!15;CL:0000223!9.35e-09!20;CL:0000473!1.13e-07!3;CL:0000627!1.13e-07!3;CL:0000682!1.13e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.33e-65,3;CL:0002563,1.19e-22,9;CL:0002251,1.19e-22,9;CL:0002076,5.35e-14,15;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.47e-21!15;UBERON:0001242!1.00e-18!13;UBERON:0000060!1.00e-18!13;UBERON:0001262!1.00e-18!13;UBERON:0004786!1.00e-18!13;UBERON:0003350!3.54e-14!9;UBERON:0004808!3.54e-14!9;UBERON:0001277!3.54e-14!9;UBERON:0004923!1.28e-12!24;UBERON:0000160!1.36e-12!43;UBERON:0000485!1.42e-11!11;UBERON:0005409!9.89e-09!59;UBERON:0000331!7.74e-08!3;UBERON:0002116!7.74e-08!3;UBERON:0001204!7.74e-08!3;UBERON:0001168!7.74e-08!3 | |ontology_enrichment_uberon=UBERON:0000344!9.47e-21!15;UBERON:0001242!1.00e-18!13;UBERON:0000060!1.00e-18!13;UBERON:0001262!1.00e-18!13;UBERON:0004786!1.00e-18!13;UBERON:0003350!3.54e-14!9;UBERON:0004808!3.54e-14!9;UBERON:0001277!3.54e-14!9;UBERON:0004923!1.28e-12!24;UBERON:0000160!1.36e-12!43;UBERON:0000485!1.42e-11!11;UBERON:0005409!9.89e-09!59;UBERON:0000331!7.74e-08!3;UBERON:0002116!7.74e-08!3;UBERON:0001204!7.74e-08!3;UBERON:0001168!7.74e-08!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.91e-27,13;UBERON:0001262,1.91e-27,13;UBERON:0004786,1.91e-27,13;UBERON:0000344,6.31e-24,15;UBERON:0003350,1.19e-22,9;UBERON:0004808,1.19e-22,9;UBERON:0001277,1.19e-22,9;UBERON:0000485,1.00e-18,11;UBERON:0004923,2.55e-15,24;UBERON:0000160,4.61e-12,31;UBERON:0000331,1.88e-08,3;UBERON:0002116,1.88e-08,3;UBERON:0001204,1.88e-08,3;UBERON:0001168,1.88e-08,3;UBERON:0005409,3.12e-08,47 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0,0.504060259519861,1.10865255327652,0,0,0,14.1537293678125,6.15068187826422,12.2501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0,0.504060259519861,1.10865255327652,0,0,0,14.1537293678125,6.15068187826422,12.2501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:36717523..36717532,+ | |short_description=p@chr5:36717523..36717532,+ | ||
}} | }} |
Latest revision as of 09:09, 4 August 2015
Short description: | p@chr5:36717523..36717532, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:36717523..36717532, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.33e-65 | 3 |
intestinal epithelial cell | 1.19e-22 | 9 |
epithelial cell of alimentary canal | 1.19e-22 | 9 |
endo-epithelial cell | 5.35e-14 | 15 |
endodermal cell | 9.91e-11 | 20 |
epithelial cell | 9.29e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.91e-27 | 13 |
wall of intestine | 1.91e-27 | 13 |
gastrointestinal system mucosa | 1.91e-27 | 13 |
mucosa | 6.31e-24 | 15 |
epithelium of mucosa | 1.19e-22 | 9 |
gastrointestinal system epithelium | 1.19e-22 | 9 |
intestinal epithelium | 1.19e-22 | 9 |
simple columnar epithelium | 1.00e-18 | 11 |
organ component layer | 2.55e-15 | 24 |
intestine | 4.61e-12 | 31 |
ileal mucosa | 1.88e-08 | 3 |
ileum | 1.88e-08 | 3 |
mucosa of small intestine | 1.88e-08 | 3 |
wall of small intestine | 1.88e-08 | 3 |
gastrointestinal system | 3.12e-08 | 47 |