FFCP PHASE1:Mm9::chr13:112239431..112239480,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:112239431..112239480,- | |||
|description=CAGE_peak_at_chr13:112239431..112239480,- | |description=CAGE_peak_at_chr13:112239431..112239480,- | ||
|id=chr13:112239431..112239480,- | |id=chr13:112239431..112239480,- | ||
|ontology_enrichment_celltype=CL:0000473!6.16e-11!3;CL:0000627!6.16e-11!3;CL:0000682!6.16e-11!3;CL:0000239!5.74e-09!6;CL:0000677!5.74e-09!6;CL:0000212!5.74e-09!6;CL:0000584!5.74e-09!6;CL:0000075!1.10e-07!7;CL:0000066!2.89e-07!25 | |ontology_enrichment_celltype=CL:0000473!6.16e-11!3;CL:0000627!6.16e-11!3;CL:0000682!6.16e-11!3;CL:0000239!5.74e-09!6;CL:0000677!5.74e-09!6;CL:0000212!5.74e-09!6;CL:0000584!5.74e-09!6;CL:0000075!1.10e-07!7;CL:0000066!2.89e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.76e-25,3;CL:0000239,1.93e-21,6;CL:0000677,1.93e-21,6;CL:0000584,1.93e-21,6;CL:0000075,1.93e-18,7;CL:0000066,1.64e-15,25;CL:0002563,1.98e-14,9;CL:0002251,1.98e-14,9;CL:0000473,2.65e-11,7;CL:0002076,8.72e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.91e-10!15;UBERON:0003929!2.43e-09!55;UBERON:0002370!8.95e-09!23;UBERON:0000974!8.95e-09!23;UBERON:0004807!8.95e-09!23;UBERON:0005058!8.95e-09!23;UBERON:0003351!8.95e-09!23;UBERON:0009113!8.95e-09!23;UBERON:0003295!8.95e-09!23;UBERON:0009722!8.95e-09!23;UBERON:0005562!8.95e-09!23;UBERON:0007690!8.95e-09!23;UBERON:0006562!2.39e-08!24;UBERON:0003408!2.39e-08!24;UBERON:0001557!2.39e-08!24;UBERON:0001042!2.39e-08!24;UBERON:0008814!2.39e-08!24;UBERON:0009145!2.39e-08!24;UBERON:0005911!6.15e-08!69;UBERON:0001962!1.15e-07!2;UBERON:0001961!1.15e-07!2;UBERON:0001744!1.15e-07!2;UBERON:0000490!2.82e-07!66;UBERON:0000072!2.93e-07!27 | |ontology_enrichment_uberon=UBERON:0000344!6.91e-10!15;UBERON:0003929!2.43e-09!55;UBERON:0002370!8.95e-09!23;UBERON:0000974!8.95e-09!23;UBERON:0004807!8.95e-09!23;UBERON:0005058!8.95e-09!23;UBERON:0003351!8.95e-09!23;UBERON:0009113!8.95e-09!23;UBERON:0003295!8.95e-09!23;UBERON:0009722!8.95e-09!23;UBERON:0005562!8.95e-09!23;UBERON:0007690!8.95e-09!23;UBERON:0006562!2.39e-08!24;UBERON:0003408!2.39e-08!24;UBERON:0001557!2.39e-08!24;UBERON:0001042!2.39e-08!24;UBERON:0008814!2.39e-08!24;UBERON:0009145!2.39e-08!24;UBERON:0005911!6.15e-08!69;UBERON:0001962!1.15e-07!2;UBERON:0001961!1.15e-07!2;UBERON:0001744!1.15e-07!2;UBERON:0000490!2.82e-07!66;UBERON:0000072!2.93e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.56e-25,15;UBERON:0001962,3.95e-17,2;UBERON:0001961,3.95e-17,2;UBERON:0001744,3.95e-17,2;UBERON:0004923,7.19e-16,24;UBERON:0001242,3.14e-15,13;UBERON:0001262,3.14e-15,13;UBERON:0004786,3.14e-15,13;UBERON:0003350,1.98e-14,9;UBERON:0004808,1.98e-14,9;UBERON:0001277,1.98e-14,9;UBERON:0000485,7.17e-12,11;UBERON:0002465,9.49e-12,3;UBERON:0003199,1.44e-09,1 | |||
|phase1_expression=0,7.32848356042658,6.82498859084304,0,0,2.68606835059024,5.13947809310157,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,10.5528269290898,8.03924749761028,10.7690499039769,10.7735616342945,0,0,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0.302899349844443,0.15241361331,0.201652370273681,0.0974578807397524,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,7.32848356042658,6.82498859084304,0,0,2.68606835059024,5.13947809310157,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,10.5528269290898,8.03924749761028,10.7690499039769,10.7735616342945,0,0,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0.302899349844443,0.15241361331,0.201652370273681,0.0974578807397524,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:112239431..112239480,- | |short_description=p@chr13:112239431..112239480,- | ||
}} | }} |
Latest revision as of 14:31, 5 August 2015
Short description: | p@chr13:112239431..112239480, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:112239431..112239480, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.76e-25 | 3 |
brush border epithelial cell | 1.93e-21 | 6 |
gut absorptive cell | 1.93e-21 | 6 |
enterocyte | 1.93e-21 | 6 |
columnar/cuboidal epithelial cell | 1.93e-18 | 7 |
epithelial cell | 1.64e-15 | 25 |
intestinal epithelial cell | 1.98e-14 | 9 |
epithelial cell of alimentary canal | 1.98e-14 | 9 |
defensive cell | 2.65e-11 | 7 |
endo-epithelial cell | 8.72e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.56e-25 | 15 |
gut-associated lymphoid tissue | 3.95e-17 | 2 |
mucosa-associated lymphoid tissue | 3.95e-17 | 2 |
lymphoid tissue | 3.95e-17 | 2 |
organ component layer | 7.19e-16 | 24 |
intestinal mucosa | 3.14e-15 | 13 |
wall of intestine | 3.14e-15 | 13 |
gastrointestinal system mucosa | 3.14e-15 | 13 |
epithelium of mucosa | 1.98e-14 | 9 |
gastrointestinal system epithelium | 1.98e-14 | 9 |
intestinal epithelium | 1.98e-14 | 9 |
simple columnar epithelium | 7.17e-12 | 11 |
lymphoid system | 9.49e-12 | 3 |
egg chamber | 1.44e-09 | 1 |