FFCP PHASE1:Mm9::chr17:25711365..25711370,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:25711365..25711370,+ | |||
|description=CAGE_peak_at_chr17:25711365..25711370,+ | |description=CAGE_peak_at_chr17:25711365..25711370,+ | ||
|id=chr17:25711365..25711370,+ | |id=chr17:25711365..25711370,+ | ||
|ontology_enrichment_celltype=CL:0000473!3.55e-09!3;CL:0000627!3.55e-09!3;CL:0000682!3.55e-09!3;CL:0002614!8.55e-08!3;CL:0000239!1.93e-07!6;CL:0000677!1.93e-07!6;CL:0000212!1.93e-07!6;CL:0000584!1.93e-07!6 | |ontology_enrichment_celltype=CL:0000473!3.55e-09!3;CL:0000627!3.55e-09!3;CL:0000682!3.55e-09!3;CL:0002614!8.55e-08!3;CL:0000239!1.93e-07!6;CL:0000677!1.93e-07!6;CL:0000212!1.93e-07!6;CL:0000584!1.93e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.38e-28,3;CL:0000239,1.87e-23,6;CL:0000677,1.87e-23,6;CL:0000584,1.87e-23,6;CL:0000075,3.57e-20,7;CL:0000066,4.14e-17,25;CL:0002563,8.62e-16,9;CL:0002251,8.62e-16,9;CL:0000473,2.41e-12,7;CL:0002076,1.27e-09,15;CL:0000223,2.74e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.01e-10!15;UBERON:0002298!1.67e-09!6;UBERON:0002038!8.55e-08!3;UBERON:0002308!8.55e-08!3;UBERON:0009663!8.55e-08!3;UBERON:0009661!8.55e-08!3;UBERON:0006331!8.55e-08!3;UBERON:0000125!8.55e-08!3;UBERON:0004923!2.60e-07!24;UBERON:0001242!8.33e-07!13;UBERON:0000060!8.33e-07!13;UBERON:0001262!8.33e-07!13;UBERON:0004786!8.33e-07!13 | |ontology_enrichment_uberon=UBERON:0000344!3.01e-10!15;UBERON:0002298!1.67e-09!6;UBERON:0002038!8.55e-08!3;UBERON:0002308!8.55e-08!3;UBERON:0009663!8.55e-08!3;UBERON:0009661!8.55e-08!3;UBERON:0006331!8.55e-08!3;UBERON:0000125!8.55e-08!3;UBERON:0004923!2.60e-07!24;UBERON:0001242!8.33e-07!13;UBERON:0000060!8.33e-07!13;UBERON:0001262!8.33e-07!13;UBERON:0004786!8.33e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.01e-28,15;UBERON:0001962,1.94e-18,2;UBERON:0001961,1.94e-18,2;UBERON:0001744,1.94e-18,2;UBERON:0004923,2.01e-17,24;UBERON:0001242,1.07e-16,13;UBERON:0001262,1.07e-16,13;UBERON:0004786,1.07e-16,13;UBERON:0003350,8.62e-16,9;UBERON:0004808,8.62e-16,9;UBERON:0001277,8.62e-16,9;UBERON:0000485,5.41e-13,11;UBERON:0002465,1.24e-12,3;UBERON:0003199,3.74e-10,1;UBERON:0000160,4.68e-07,31 | |||
|phase1_expression=0,8.72438519098403,10.9199817453489,0,0,6.5472916045637,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.35965144849671,9.86459908588831,12.0588712464154,13.7843838770904,20.2542958724736,0,0,5.98672378769323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,8.72438519098403,10.9199817453489,0,0,6.5472916045637,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.35965144849671,9.86459908588831,12.0588712464154,13.7843838770904,20.2542958724736,0,0,5.98672378769323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:25711365..25711370,+ | |short_description=p@chr17:25711365..25711370,+ | ||
}} | }} |
Latest revision as of 11:11, 4 August 2015
Short description: | p@chr17:25711365..25711370, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:25711365..25711370, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.38e-28 | 3 |
brush border epithelial cell | 1.87e-23 | 6 |
gut absorptive cell | 1.87e-23 | 6 |
enterocyte | 1.87e-23 | 6 |
columnar/cuboidal epithelial cell | 3.57e-20 | 7 |
epithelial cell | 4.14e-17 | 25 |
intestinal epithelial cell | 8.62e-16 | 9 |
epithelial cell of alimentary canal | 8.62e-16 | 9 |
defensive cell | 2.41e-12 | 7 |
endo-epithelial cell | 1.27e-09 | 15 |
endodermal cell | 2.74e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.01e-28 | 15 |
gut-associated lymphoid tissue | 1.94e-18 | 2 |
mucosa-associated lymphoid tissue | 1.94e-18 | 2 |
lymphoid tissue | 1.94e-18 | 2 |
organ component layer | 2.01e-17 | 24 |
intestinal mucosa | 1.07e-16 | 13 |
wall of intestine | 1.07e-16 | 13 |
gastrointestinal system mucosa | 1.07e-16 | 13 |
epithelium of mucosa | 8.62e-16 | 9 |
gastrointestinal system epithelium | 8.62e-16 | 9 |
intestinal epithelium | 8.62e-16 | 9 |
simple columnar epithelium | 5.41e-13 | 11 |
lymphoid system | 1.24e-12 | 3 |
egg chamber | 3.74e-10 | 1 |
intestine | 4.68e-07 | 31 |