FFCP PHASE1:Hg19::chr2:163101340..163101352,-: Difference between revisions
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|id=chr2:163101340..163101352,-
|short_description=p7@FAP
|description=CAGE_peak_7_at_FAP_5end
|association_with_transcript=308bp_to_ENST00000493182_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2191 | |EntrezGene=2191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3590 | |HGNC=3590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=308bp_to_ENST00000493182_5end | |||
|cluster_id=chr2:163101340..163101352,- | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_7_at_FAP_5end | |||
|id=chr2:163101340..163101352,- | |||
|ontology_enrichment_celltype=CL:0002076!7.75e-22!43;CL:0002251!4.29e-21!21;CL:0000223!2.33e-17!59;CL:0002621!5.17e-15!3;CL:0000066!1.17e-08!254;CL:0002231!1.00e-07!3;CL:0002541!1.69e-07!3;CL:0002166!2.57e-07!3;CL:0002623!2.57e-07!3;CL:0000039!3.62e-07!7;CL:0000586!3.62e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.66e-23;3!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.09e-23,3;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.34e-66;1!UBERON:0004872;9.43e-11;7!UBERON:0005795;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!5.17e-15!3;UBERON:0003124!1.24e-11!7;UBERON:0000166!2.42e-10!21;UBERON:0000161!1.05e-09!35;UBERON:0005631!1.26e-08!14;UBERON:0000158!1.26e-08!14;UBERON:0000165!1.58e-07!28;UBERON:0000930!1.58e-07!28;UBERON:0000476!1.69e-07!3;UBERON:0000920!1.69e-07!3;UBERON:0004119!6.69e-07!169;UBERON:0000925!6.69e-07!169;UBERON:0006595!6.69e-07!169;UBERON:0000478!9.98e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.66e-23;3!UBERON:0000920;3.66e-23;3!UBERON:0001987;9.45e-18;4!UBERON:0000478;4.20e-12;24!UBERON:0005631;6.34e-08;10!UBERON:0000158;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.18e-38,7;UBERON:0000920,4.09e-23,3;UBERON:0005631,7.13e-20,14;UBERON:0000158,7.13e-20,14;UBERON:0001987,8.69e-18,4;UBERON:0004340,8.69e-18,4;UBERON:0000478,4.20e-12,24 | |||
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|short_description=p7@FAP | |||
}} | }} |
Latest revision as of 21:44, 17 September 2015
Short description: | p7@FAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAP_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | 308bp_to_ENST00000493182_5end |
EntrezGene: | FAP |
HGNC: | 3590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.09e-23 | 3 |
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.18e-38 | 7 |
egg chorion | 4.09e-23 | 3 |
extraembryonic membrane | 7.13e-20 | 14 |
membranous layer | 7.13e-20 | 14 |
placenta | 8.69e-18 | 4 |
allantois | 8.69e-18 | 4 |
extraembryonic structure | 4.20e-12 | 24 |