FFCP PHASE1:Hg19::chr2:164592392..164592418,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:164592392..164592418,-
|short_description=p3@FIGN
|description=CAGE_peak_3_at_FIGN_5end
|association_with_transcript=75bp_to_ENST00000482917_5end
|EntrezG...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55137 | |EntrezGene=55137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13285 | |HGNC=13285 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_ENST00000482917_5end | |||
|cluster_id=chr2:164592392..164592418,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_3_at_FIGN_5end | |||
|id=chr2:164592392..164592418,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.00e-10;3!CL:0000136;2.44e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.87e-10,3;CL:0000136,4.51e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.73e-10;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.00e-26!115;UBERON:0001017!1.42e-16!82;UBERON:0001049!5.71e-16!57;UBERON:0005068!5.71e-16!57;UBERON:0006241!5.71e-16!57;UBERON:0007135!5.71e-16!57;UBERON:0005743!9.72e-16!86;UBERON:0000955!1.33e-15!69;UBERON:0006238!1.33e-15!69;UBERON:0000073!1.10e-14!94;UBERON:0001016!1.10e-14!94;UBERON:0002616!4.36e-14!59;UBERON:0003075!3.27e-13!86;UBERON:0007284!3.27e-13!86;UBERON:0003080!7.64e-12!42;UBERON:0002346!8.85e-12!90;UBERON:0000062!2.65e-11!511;UBERON:0002780!3.49e-11!41;UBERON:0001890!3.49e-11!41;UBERON:0006240!3.49e-11!41;UBERON:0000033!6.40e-11!123;UBERON:0004121!1.38e-10!169;UBERON:0000475!1.46e-10!365;UBERON:0000153!5.21e-10!129;UBERON:0007811!5.21e-10!129;UBERON:0000924!9.16e-10!173;UBERON:0006601!9.16e-10!173;UBERON:0000481!2.63e-09!347;UBERON:0000477!4.49e-09!286;UBERON:0002020!4.71e-09!34;UBERON:0003528!4.71e-09!34;UBERON:0001893!5.31e-09!34;UBERON:0003056!7.38e-09!61;UBERON:0001869!1.28e-08!32;UBERON:0002791!1.37e-08!33;UBERON:0000956!1.87e-08!25;UBERON:0000203!1.87e-08!25;UBERON:0000468!1.26e-07!659;UBERON:0000467!2.48e-07!625;UBERON:0000480!3.18e-07!626;UBERON:0002619!4.07e-07!22;UBERON:0004111!8.84e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;9.69e-13;6!UBERON:0003293;9.69e-13;6!UBERON:0003294;9.69e-13;6!UBERON:0010047;9.69e-13;6!UBERON:0003408;9.69e-13;6!UBERON:0000167;9.69e-13;6!UBERON:0001041;3.19e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,6.86e-13,6;UBERON:0003293,6.86e-13,6;UBERON:0003294,6.86e-13,6;UBERON:0010047,6.86e-13,6;UBERON:0000167,6.86e-13,6;UBERON:0007023,1.62e-09,114;UBERON:0003408,1.42e-07,10 | |||
|phase1_expression=0,0.214100523890983,0.986680828671798,0,1.34088328328186,3.48935409640147,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0.984968464614303,0,0.626909442956176,0.572471974262113,0.958120975510189,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,1.41802225746102,0.665188192387692,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,0,0.625098097988558,0.44905874525234,0,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0.718618141816238,0.505008341862199,0,0,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0.302256294682921,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.539325232640658,0.98110732562673,0.38474715694639,0,0,0,0,0,0,1.77236972004421,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.621984346622316,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.537182889719687,0,0,0,0,0.76228387266739,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.702848489956279,0.300946099727719,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0.0920809889358963,0.229628896329213,0.546273504020151,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,1.44257416306811,1.09883357782012,0.165018999841176,0,0.650060246036521,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,1.5250415513906,0.255897791311334,0,0,0,1.79872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0,0,1.50149902548784,0.707027159768564,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,1.81600920916704,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,90.9950509031652,1.19548792950642,0.552567831062295,0,0.102268682502155,0,0,0.359473404589307,0,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0.291604613383254,2.60437492399938,0,0.361789315876224,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0,2.23155749661011,0.341826167541004,0,0.179515288819544,0,0,0.0915975934018623,0,0,11.9304994860219,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0.104421949505455,0.269604531922708,1.60515529459758,0.937057782901357,0,0,0,1.57833761139756,0,1.22429104652196,0.821425535170343,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.783532859223623,1.57254001417827,0,0.387025325156341,0.219267951258557,0.164230914106418,1.06687918137261,0,0,0,0,0.379864775735272,0,0.320635281006135,1.92107695265417,0,0,0,0.171594997861965,0,0.124252535565433,0,0.543616824294456,0.627617077873999,0.305994652908965,0.577901179803038,0,0.273810757783986,0,0,0,0.558564802544508,2.97908551215189,0,0.599037001496973,0.858452096273142,0.89268582976749,2.28423806454869,0,0,0.0787831823072236,0.247247575143499,0.13480708770837,0,0,2.38568906942791,0.408610218334727,0,0.275078873194468,0,0,0,0.789744236554321,0,1.26089131678717,0.629455057619977,0,0,0.383830394638891,1.42939065274673,0,0,0,0,0.653174720218818,0,0,1.19271615249795,0.113312091520126,1.31897010310274,2.65013777824443,0.258565912723101,0.66116300871345,0,0,0.854299300541557,0.471612915298998,0.414239055347196,1.9846640872478,0,0,0,2.1760712134779,5.013797880454,5.20787480497885,4.91808946064707,0,0,0.488105059607853,0.751145584238999,0.573409195690071,0.887432412294818,1.05563885000352,13.2814689538782,0.37494122388632,0,0,0,0,0.869526171664951,0.149254802886874,0.233713309847224,0.554805861502613,0.947015026375446,1.0062716070103,0,0,0.907385542579434,0.15543720058278,0,0.159296767163702,0,0.465788870628778,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,1.20008329398946,0,0,0,0.963099152036517,1.50109113962448,0,0.226705925512272,0,0,0.179088841081487,0,0.438568099157414,0,0.771656153083659,0.506827321959218,0,0.345430341731199,0.607719912354764,0.414775308455192,0,0,0,0,0,0,0,0,0,0.567515953566836,0.368211900503681,0,1.86623178009892,0.255788742607303,0,0,0.873677105536111,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,2.8339315265117,0.798169295285756,1.02558182120378,0.252071696221718,0.138314504928436,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0.596748666348824,2.03067886542995,0,0,0.261906694481422,0,0,0.540300676947157,0.781078098613847,0,0.253663240775627,0.546974809018219,0,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,1.36597314810779,0,0.460935950223117,1.8863681038116,0.203909198930495,0.197318320688547,0.118193840883968,0,0.235479278551542,0.157115589916002,0,3.65263488203798,0.431855182437243,0.47775168788705,0.78624198594322,0,0,0,0,2.27937780579341,5.63370974410035,2.76503864725637,1.72090943528111,0.118332000730565,0.0852134047591577,0.423387050190929,1.3746412112643,1.24082554265728,4.77769469488717,0,0,0,0.647428837187895,0.205325613712494,0,0,0.233939463462106,0,6.18384472043357,0,0.219881033490858,0,0.694567422971502,0,0,0,0.942706188406504,0.392616934229891,0.594092800654172,0.4226557275834,0,1.2217909337381,2.44939974299593,0,0,0,0.0802413666891683,0,1.37618785021362,0.143339583151451,0,0.475940431336403,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0,0.909344378618873,0.535928260312357,0.829169439458779,0.413731983447581,0.639701945702943,0,0,0,0.560659312903067,0.190941474834495,0.202117188958219,1.74173398317569,0,0.134704106029175,0.215166616178029,0.665320713092027,0,1.70763753404345,0,0.179650404213174,0,1.34465588601153,0.406896178315738,0.665756774185513,1.40891655513718,0 | |phase1_expression=0,0.214100523890983,0.986680828671798,0,1.34088328328186,3.48935409640147,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0.984968464614303,0,0.626909442956176,0.572471974262113,0.958120975510189,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,1.41802225746102,0.665188192387692,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,0,0.625098097988558,0.44905874525234,0,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0.718618141816238,0.505008341862199,0,0,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0.302256294682921,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.539325232640658,0.98110732562673,0.38474715694639,0,0,0,0,0,0,1.77236972004421,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.621984346622316,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.537182889719687,0,0,0,0,0.76228387266739,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.702848489956279,0.300946099727719,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0.0920809889358963,0.229628896329213,0.546273504020151,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,1.44257416306811,1.09883357782012,0.165018999841176,0,0.650060246036521,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,1.5250415513906,0.255897791311334,0,0,0,1.79872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0,0,1.50149902548784,0.707027159768564,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,1.81600920916704,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,90.9950509031652,1.19548792950642,0.552567831062295,0,0.102268682502155,0,0,0.359473404589307,0,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0.291604613383254,2.60437492399938,0,0.361789315876224,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0,2.23155749661011,0.341826167541004,0,0.179515288819544,0,0,0.0915975934018623,0,0,11.9304994860219,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0.104421949505455,0.269604531922708,1.60515529459758,0.937057782901357,0,0,0,1.57833761139756,0,1.22429104652196,0.821425535170343,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.783532859223623,1.57254001417827,0,0.387025325156341,0.219267951258557,0.164230914106418,1.06687918137261,0,0,0,0,0.379864775735272,0,0.320635281006135,1.92107695265417,0,0,0,0.171594997861965,0,0.124252535565433,0,0.543616824294456,0.627617077873999,0.305994652908965,0.577901179803038,0,0.273810757783986,0,0,0,0.558564802544508,2.97908551215189,0,0.599037001496973,0.858452096273142,0.89268582976749,2.28423806454869,0,0,0.0787831823072236,0.247247575143499,0.13480708770837,0,0,2.38568906942791,0.408610218334727,0,0.275078873194468,0,0,0,0.789744236554321,0,1.26089131678717,0.629455057619977,0,0,0.383830394638891,1.42939065274673,0,0,0,0,0.653174720218818,0,0,1.19271615249795,0.113312091520126,1.31897010310274,2.65013777824443,0.258565912723101,0.66116300871345,0,0,0.854299300541557,0.471612915298998,0.414239055347196,1.9846640872478,0,0,0,2.1760712134779,5.013797880454,5.20787480497885,4.91808946064707,0,0,0.488105059607853,0.751145584238999,0.573409195690071,0.887432412294818,1.05563885000352,13.2814689538782,0.37494122388632,0,0,0,0,0.869526171664951,0.149254802886874,0.233713309847224,0.554805861502613,0.947015026375446,1.0062716070103,0,0,0.907385542579434,0.15543720058278,0,0.159296767163702,0,0.465788870628778,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,1.20008329398946,0,0,0,0.963099152036517,1.50109113962448,0,0.226705925512272,0,0,0.179088841081487,0,0.438568099157414,0,0.771656153083659,0.506827321959218,0,0.345430341731199,0.607719912354764,0.414775308455192,0,0,0,0,0,0,0,0,0,0.567515953566836,0.368211900503681,0,1.86623178009892,0.255788742607303,0,0,0.873677105536111,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,2.8339315265117,0.798169295285756,1.02558182120378,0.252071696221718,0.138314504928436,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0.596748666348824,2.03067886542995,0,0,0.261906694481422,0,0,0.540300676947157,0.781078098613847,0,0.253663240775627,0.546974809018219,0,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,1.36597314810779,0,0.460935950223117,1.8863681038116,0.203909198930495,0.197318320688547,0.118193840883968,0,0.235479278551542,0.157115589916002,0,3.65263488203798,0.431855182437243,0.47775168788705,0.78624198594322,0,0,0,0,2.27937780579341,5.63370974410035,2.76503864725637,1.72090943528111,0.118332000730565,0.0852134047591577,0.423387050190929,1.3746412112643,1.24082554265728,4.77769469488717,0,0,0,0.647428837187895,0.205325613712494,0,0,0.233939463462106,0,6.18384472043357,0,0.219881033490858,0,0.694567422971502,0,0,0,0.942706188406504,0.392616934229891,0.594092800654172,0.4226557275834,0,1.2217909337381,2.44939974299593,0,0,0,0.0802413666891683,0,1.37618785021362,0.143339583151451,0,0.475940431336403,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0,0.909344378618873,0.535928260312357,0.829169439458779,0.413731983447581,0.639701945702943,0,0,0,0.560659312903067,0.190941474834495,0.202117188958219,1.74173398317569,0,0.134704106029175,0.215166616178029,0.665320713092027,0,1.70763753404345,0,0.179650404213174,0,1.34465588601153,0.406896178315738,0.665756774185513,1.40891655513718,0 | ||
|short_description=p3@FIGN | |||
}} | }} |
Latest revision as of 22:35, 17 September 2015
Short description: | p3@FIGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FIGN_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 75bp_to_ENST00000482917_5end |
EntrezGene: | FIGN |
HGNC: | 13285 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.87e-10 | 3 |
fat cell | 4.51e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 6.86e-13 | 6 |
gland of oral region | 6.86e-13 | 6 |
gland of foregut | 6.86e-13 | 6 |
oral gland | 6.86e-13 | 6 |
oral cavity | 6.86e-13 | 6 |
adult organism | 1.62e-09 | 114 |
gland of gut | 1.42e-07 | 10 |