FFCP PHASE1:Mm9::chr8:108351542..108351566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74334 | |EntrezGene=74334 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q6VN19 | |UniProt=Q6VN19 | ||
|association_with_transcript=-292bp_to_ENSMUST00000041400,NM_145824,uc009nec.1,uc009ned.1_5end | |association_with_transcript=-292bp_to_ENSMUST00000041400,NM_145824,uc009nec.1,uc009ned.1_5end | ||
|cluster_id=chr8:108351542..108351566,- | |||
|description=CAGE_peak_1_at_Ranbp10_5end | |description=CAGE_peak_1_at_Ranbp10_5end | ||
|id=chr8:108351542..108351566,- | |id=chr8:108351542..108351566,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002027,4.91e-11,3;CL:0002006,4.91e-11,3;CL:0002024,4.91e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.02e-15,6;UBERON:0004457,7.02e-15,6;UBERON:0000042,7.02e-15,6;UBERON:0004854,7.02e-15,6;UBERON:0009034,7.02e-15,6;UBERON:0002095,7.02e-15,6;UBERON:0004782,7.02e-15,6;UBERON:0003281,7.02e-15,6;UBERON:0009664,7.02e-15,6;UBERON:0002296,7.02e-15,6;UBERON:0005602,7.02e-15,6;UBERON:0001179,7.02e-15,6;UBERON:0006293,7.02e-15,6;UBERON:0003887,2.35e-12,10;UBERON:0005172,3.04e-10,49;UBERON:0005173,3.04e-10,49;UBERON:0002417,3.04e-10,49;UBERON:0000916,3.04e-10,49;UBERON:0002107,1.48e-07,22;UBERON:0007499,1.48e-07,22;UBERON:0006925,1.48e-07,22;UBERON:0009497,1.48e-07,22;UBERON:0000015,1.48e-07,22;UBERON:0002423,1.48e-07,22;UBERON:0006235,1.48e-07,22;UBERON:0008835,1.48e-07,22;UBERON:0003894,1.48e-07,22;UBERON:0004161,1.48e-07,22;UBERON:0008836,1.48e-07,22;UBERON:0009854,3.46e-07,23;UBERON:0009856,3.46e-07,23;UBERON:0009569,5.58e-07,66 | |||
|phase1_expression=0.160148847104794,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0,0,0,0.174840804837995,2.33176833270964,3.44207954562704,1.39912375625629,0,0,0,3.82694805679814,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.79928715803342,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0,0.247194967734374,0,0,0.323533699894818,1.32504911076236,2.42437626567611,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,1.8661045591514,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0.296452627087149,2.50267658574141,3.14494392181125,4.72210436008193,5.88294352026658,6.99413763282009,7.63877555344259,3.45235364940973,0.972811360650212,0.274561413188081,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,3.07567585436135,0.412773735926445,2.03713980106683,3.20226376907975,2.87057878214153,4.34678529092393,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,23.1114104860518,0,0.165458490457098,0.583353565032143,0.516639293910924,0.506868376472335,0.352071715937262,0,0,12.5623742829523,16.9937703692141,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.443068581523732,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0,0,0,0,0.269141569828427,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,1.70174701947806,0,0,0.44449345560323,1.03017528619447,0,0.505394423527595,0.760437899670719,0.565879024158229,0.187283014939765,0.704276676453562,0.861532034334199,0.952587382566147,0.579421629724277,0.964546102318525,1.23625770240992,0.294397840268795,0,0.887379030796687,0.715308569841963,0.145346416632329,0.752875043322645,0.338458431566706,0.73171189149109,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.214871054048298,0,0.882365676478062,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0,0,0,0.174840804837995,2.33176833270964,3.44207954562704,1.39912375625629,0,0,0,3.82694805679814,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.79928715803342,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0,0.247194967734374,0,0,0.323533699894818,1.32504911076236,2.42437626567611,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,1.8661045591514,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0.296452627087149,2.50267658574141,3.14494392181125,4.72210436008193,5.88294352026658,6.99413763282009,7.63877555344259,3.45235364940973,0.972811360650212,0.274561413188081,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,3.07567585436135,0.412773735926445,2.03713980106683,3.20226376907975,2.87057878214153,4.34678529092393,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,23.1114104860518,0,0.165458490457098,0.583353565032143,0.516639293910924,0.506868376472335,0.352071715937262,0,0,12.5623742829523,16.9937703692141,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.443068581523732,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0,0,0,0,0.269141569828427,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,1.70174701947806,0,0,0.44449345560323,1.03017528619447,0,0.505394423527595,0.760437899670719,0.565879024158229,0.187283014939765,0.704276676453562,0.861532034334199,0.952587382566147,0.579421629724277,0.964546102318525,1.23625770240992,0.294397840268795,0,0.887379030796687,0.715308569841963,0.145346416632329,0.752875043322645,0.338458431566706,0.73171189149109,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.214871054048298,0,0.882365676478062,0.463735671240843 | ||
|short_description=p1@Ranbp10 | |short_description=p1@Ranbp10 | ||
}} | }} |
Latest revision as of 07:43, 27 September 2015
Short description: | p1@Ranbp10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ranbp10_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -292bp_to_ENSMUST00000041400, NM_145824, uc009nec.1, uc009ned.1_5end |
EntrezGene: | Ranbp10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 4.91e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.91e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.91e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.02e-15 | 6 |
cavity lining | 7.02e-15 | 6 |
serous membrane | 7.02e-15 | 6 |
gastrointestinal system mesentery | 7.02e-15 | 6 |
stomach region | 7.02e-15 | 6 |
mesentery | 7.02e-15 | 6 |
gastrointestinal system serosa | 7.02e-15 | 6 |
mesentery of stomach | 7.02e-15 | 6 |
gut mesentery | 7.02e-15 | 6 |
dorsal mesentery | 7.02e-15 | 6 |
dorsal mesogastrium | 7.02e-15 | 6 |
peritoneal cavity | 7.02e-15 | 6 |
spleen primordium | 7.02e-15 | 6 |
intraembryonic coelom | 2.35e-12 | 10 |
abdomen element | 3.04e-10 | 49 |
abdominal segment element | 3.04e-10 | 49 |
abdominal segment of trunk | 3.04e-10 | 49 |
abdomen | 3.04e-10 | 49 |
liver | 1.48e-07 | 22 |
epithelial sac | 1.48e-07 | 22 |
digestive gland | 1.48e-07 | 22 |
epithelium of foregut-midgut junction | 1.48e-07 | 22 |
anatomical boundary | 1.48e-07 | 22 |
hepatobiliary system | 1.48e-07 | 22 |
foregut-midgut junction | 1.48e-07 | 22 |
hepatic diverticulum | 1.48e-07 | 22 |
liver primordium | 1.48e-07 | 22 |
septum transversum | 1.48e-07 | 22 |
liver bud | 1.48e-07 | 22 |
digestive tract diverticulum | 3.46e-07 | 23 |
sac | 3.46e-07 | 23 |
subdivision of trunk | 5.58e-07 | 66 |