FFCP PHASE1:Mm9::chr1:168060567..168060593,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59290 | |EntrezGene=59290 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JKA5 | |UniProt=Q9JKA5 | ||
|association_with_transcript=0bp_to_NM_021610,uc007dkj.1_5end | |association_with_transcript=0bp_to_NM_021610,uc007dkj.1_5end | ||
|cluster_id=chr1:168060567..168060593,+ | |||
|description=CAGE_peak_1_at_Gpa33_5end | |description=CAGE_peak_1_at_Gpa33_5end | ||
|id=chr1:168060567..168060593,+ | |id=chr1:168060567..168060593,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.07e-08!9;CL:0002251!5.07e-08!9 | |ontology_enrichment_celltype=CL:0002563!5.07e-08!9;CL:0002251!5.07e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.37e-10,9;CL:0002251,1.37e-10,9;CL:0000239,7.20e-08,6;CL:0000677,7.20e-08,6;CL:0000584,7.20e-08,6;CL:0002076,1.94e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.44e-20!59;UBERON:0000160!3.27e-18!43;UBERON:0000344!3.13e-13!15;UBERON:0001242!1.85e-11!13;UBERON:0000060!1.85e-11!13;UBERON:0001262!1.85e-11!13;UBERON:0004786!1.85e-11!13;UBERON:0001007!2.55e-08!128;UBERON:0001555!2.55e-08!128;UBERON:0007026!2.55e-08!128;UBERON:0004119!2.96e-08!130;UBERON:0000925!2.96e-08!130;UBERON:0006595!2.96e-08!130;UBERON:0004923!3.99e-08!24;UBERON:0003350!5.07e-08!9;UBERON:0004808!5.07e-08!9;UBERON:0001277!5.07e-08!9;UBERON:0004921!2.21e-07!126;UBERON:0004185!2.21e-07!126 | |ontology_enrichment_uberon=UBERON:0005409!2.44e-20!59;UBERON:0000160!3.27e-18!43;UBERON:0000344!3.13e-13!15;UBERON:0001242!1.85e-11!13;UBERON:0000060!1.85e-11!13;UBERON:0001262!1.85e-11!13;UBERON:0004786!1.85e-11!13;UBERON:0001007!2.55e-08!128;UBERON:0001555!2.55e-08!128;UBERON:0007026!2.55e-08!128;UBERON:0004119!2.96e-08!130;UBERON:0000925!2.96e-08!130;UBERON:0006595!2.96e-08!130;UBERON:0004923!3.99e-08!24;UBERON:0003350!5.07e-08!9;UBERON:0004808!5.07e-08!9;UBERON:0001277!5.07e-08!9;UBERON:0004921!2.21e-07!126;UBERON:0004185!2.21e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.30e-31,47;UBERON:0000160,6.60e-31,31;UBERON:0000344,7.26e-18,15;UBERON:0001242,2.18e-15,13;UBERON:0001262,2.18e-15,13;UBERON:0004786,2.18e-15,13;UBERON:0003350,1.37e-10,9;UBERON:0004808,1.37e-10,9;UBERON:0001277,1.37e-10,9;UBERON:0004923,1.85e-10,24;UBERON:0001007,2.80e-10,116;UBERON:0001555,2.80e-10,116;UBERON:0007026,2.80e-10,116;UBERON:0004119,7.20e-10,118;UBERON:0000925,7.20e-10,118;UBERON:0006595,7.20e-10,118;UBERON:0004921,5.29e-09,114;UBERON:0000485,3.49e-08,11 | |||
|phase1_expression=0,378.638317288707,352.62441052689,274.637503866602,220.895016906339,169.558064631009,221.231170643963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,446.218867170811,484.971220175997,341.093786684322,385.101224566213,389.571988696087,546.507354356531,325.87495777959,417.740282074594,0,0,0,82.9004148686158,84.4471998421141,70.8467666230421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,17.1342192560737,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,2.02209778005913,55.8359171826203,0.258937883647172,0,0,0,0,0,0.117588707135705,0.502666365318702,3.21353458054686,0,0,0.485300549842228,0.220841518460394,0,326.185582131714,0,0,373.478214714961,0,0,0,0,0,0,0,0,0,0,0,0,1.51633655060205,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.351902248327898,0.219195732427575,1.11218899690239,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,720.973784470647,269.739577996815,0.639864751605702,1.16118335930219,17.1393723558384,32.0676804151115,41.3623161551459,68.4812254005213,251.974931680136,133.406153326449,123.908257938533,139.269530428806,132.96550741524,255.264712057799,279.03422238823,294.729084416463,0.189667900953082,0,0,0.610953983535943,0,0.140271639780637,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,0,1.69946445308487,2.11626489875326,0.188605079755898,0.295301892880773,0,23.5169746783081,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0,0,0,0.304464949114599,0.23467170806371,0,0,0.49465875882444,0,0.0603129249281559,0,0.984845398470368,204.328066477525,0,0,0,0.185194527369712,0,0,0,0,0,0,25.7761066864081,0.316335993581135,2.23651413839534,6.48032044930808,5.64538399239065,12.8833912610245,14.0258920240214,17.7704929809472,13.0877970992015,355.66348671268,0,0,0,0,0,0.387479470433193,0.168956125490778,0.117357238645754,0,0,0,0,1.58005560314089,0,0.102710957164827,0,0,0,0.240390899039938,1.03382669022204,0.504832249740738,0.228620419965,0.806609481094724,1.26695244961678,0.962118416403295,1.16876902181569,0,0.221985953374065,0,0,21.6372345316053,0.563047426353546,1.09890974560359,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.735374033800057,2.00022055021454,3.09052585858341,4.1719497246936,4.80124702351215,2.28131369901216,2.07488975524684,2.71560371662659,2.88113185821912,3.21638626151434,0.952587382566147,2.78122382267653,2.31491064556446,1.23625770240992,2.35518272215036,1.71434626192708,1.59728225543404,2.62279808942053,2.0348498328526,1.97629698872194,1.94613598150856,3.65855945745545,2.36762740294059,2.03706170768793,2.80571135828869,2.01679530811096,2.65962102414021,2.04615521584845,2.32405261778949,1.15743966588685,0,6.31615342802603,7.73535794573874,1.14772999241306,0.220591419119515,0.463735671240843 | |phase1_expression=0,378.638317288707,352.62441052689,274.637503866602,220.895016906339,169.558064631009,221.231170643963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,446.218867170811,484.971220175997,341.093786684322,385.101224566213,389.571988696087,546.507354356531,325.87495777959,417.740282074594,0,0,0,82.9004148686158,84.4471998421141,70.8467666230421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,17.1342192560737,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,2.02209778005913,55.8359171826203,0.258937883647172,0,0,0,0,0,0.117588707135705,0.502666365318702,3.21353458054686,0,0,0.485300549842228,0.220841518460394,0,326.185582131714,0,0,373.478214714961,0,0,0,0,0,0,0,0,0,0,0,0,1.51633655060205,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.351902248327898,0.219195732427575,1.11218899690239,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,720.973784470647,269.739577996815,0.639864751605702,1.16118335930219,17.1393723558384,32.0676804151115,41.3623161551459,68.4812254005213,251.974931680136,133.406153326449,123.908257938533,139.269530428806,132.96550741524,255.264712057799,279.03422238823,294.729084416463,0.189667900953082,0,0,0.610953983535943,0,0.140271639780637,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,0,1.69946445308487,2.11626489875326,0.188605079755898,0.295301892880773,0,23.5169746783081,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0,0,0,0.304464949114599,0.23467170806371,0,0,0.49465875882444,0,0.0603129249281559,0,0.984845398470368,204.328066477525,0,0,0,0.185194527369712,0,0,0,0,0,0,25.7761066864081,0.316335993581135,2.23651413839534,6.48032044930808,5.64538399239065,12.8833912610245,14.0258920240214,17.7704929809472,13.0877970992015,355.66348671268,0,0,0,0,0,0.387479470433193,0.168956125490778,0.117357238645754,0,0,0,0,1.58005560314089,0,0.102710957164827,0,0,0,0.240390899039938,1.03382669022204,0.504832249740738,0.228620419965,0.806609481094724,1.26695244961678,0.962118416403295,1.16876902181569,0,0.221985953374065,0,0,21.6372345316053,0.563047426353546,1.09890974560359,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.735374033800057,2.00022055021454,3.09052585858341,4.1719497246936,4.80124702351215,2.28131369901216,2.07488975524684,2.71560371662659,2.88113185821912,3.21638626151434,0.952587382566147,2.78122382267653,2.31491064556446,1.23625770240992,2.35518272215036,1.71434626192708,1.59728225543404,2.62279808942053,2.0348498328526,1.97629698872194,1.94613598150856,3.65855945745545,2.36762740294059,2.03706170768793,2.80571135828869,2.01679530811096,2.65962102414021,2.04615521584845,2.32405261778949,1.15743966588685,0,6.31615342802603,7.73535794573874,1.14772999241306,0.220591419119515,0.463735671240843 | ||
|short_description=p1@Gpa33 | |short_description=p1@Gpa33 | ||
}} | }} |
Latest revision as of 17:36, 26 September 2015
Short description: | p1@Gpa33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpa33_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NM_021610, uc007dkj.1_5end |
EntrezGene: | Gpa33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.37e-10 | 9 |
epithelial cell of alimentary canal | 1.37e-10 | 9 |
brush border epithelial cell | 7.20e-08 | 6 |
gut absorptive cell | 7.20e-08 | 6 |
enterocyte | 7.20e-08 | 6 |
endo-epithelial cell | 1.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.30e-31 | 47 |
intestine | 6.60e-31 | 31 |
mucosa | 7.26e-18 | 15 |
intestinal mucosa | 2.18e-15 | 13 |
wall of intestine | 2.18e-15 | 13 |
gastrointestinal system mucosa | 2.18e-15 | 13 |
epithelium of mucosa | 1.37e-10 | 9 |
gastrointestinal system epithelium | 1.37e-10 | 9 |
intestinal epithelium | 1.37e-10 | 9 |
organ component layer | 1.85e-10 | 24 |
digestive system | 2.80e-10 | 116 |
digestive tract | 2.80e-10 | 116 |
primitive gut | 2.80e-10 | 116 |
endoderm-derived structure | 7.20e-10 | 118 |
endoderm | 7.20e-10 | 118 |
presumptive endoderm | 7.20e-10 | 118 |
subdivision of digestive tract | 5.29e-09 | 114 |
simple columnar epithelium | 3.49e-08 | 11 |