FFCP PHASE1:Mm9::chr14:75132109..75132181,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100040682,13885 | |EntrezGene=100040682,13885 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |MCL_coexpression_id=72 | ||
|TSSclassifier=NA | |||
|UniProt=Q9R0P3 | |UniProt=Q9R0P3 | ||
|association_with_transcript=0bp_to_ENSMUST00000022573,NM_016903,uc007uqd.1_5end | |association_with_transcript=0bp_to_ENSMUST00000022573,NM_016903,uc007uqd.1_5end | ||
|cluster_id=chr14:75132109..75132181,+ | |||
|description=CAGE_peak_1_at_Esd_5end,CAGE_peak_1_at_Gm2904_5end | |description=CAGE_peak_1_at_Esd_5end,CAGE_peak_1_at_Gm2904_5end | ||
|id=chr14:75132109..75132181,+ | |id=chr14:75132109..75132181,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.86e-09!59;UBERON:0004119!1.30e-08!130;UBERON:0000925!1.30e-08!130;UBERON:0006595!1.30e-08!130;UBERON:0000160!2.16e-08!43;UBERON:0001007!2.78e-08!128;UBERON:0001555!2.78e-08!128;UBERON:0007026!2.78e-08!128;UBERON:0000926!5.38e-08!193;UBERON:0004120!5.38e-08!193;UBERON:0006603!5.38e-08!193;UBERON:0009569!7.43e-08!66;UBERON:0004921!1.49e-07!126;UBERON:0004185!1.49e-07!126;UBERON:0005172!2.38e-07!49;UBERON:0005173!2.38e-07!49;UBERON:0002417!2.38e-07!49;UBERON:0000916!2.38e-07!49;UBERON:0005256!3.36e-07!47;UBERON:0003914!5.64e-07!47;UBERON:0002100!7.83e-07!98 | |ontology_enrichment_uberon=UBERON:0005409!3.86e-09!59;UBERON:0004119!1.30e-08!130;UBERON:0000925!1.30e-08!130;UBERON:0006595!1.30e-08!130;UBERON:0000160!2.16e-08!43;UBERON:0001007!2.78e-08!128;UBERON:0001555!2.78e-08!128;UBERON:0007026!2.78e-08!128;UBERON:0000926!5.38e-08!193;UBERON:0004120!5.38e-08!193;UBERON:0006603!5.38e-08!193;UBERON:0009569!7.43e-08!66;UBERON:0004921!1.49e-07!126;UBERON:0004185!1.49e-07!126;UBERON:0005172!2.38e-07!49;UBERON:0005173!2.38e-07!49;UBERON:0002417!2.38e-07!49;UBERON:0000916!2.38e-07!49;UBERON:0005256!3.36e-07!47;UBERON:0003914!5.64e-07!47;UBERON:0002100!7.83e-07!98 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.45e-10,90;UBERON:0005409,1.19e-09,47;UBERON:0000160,2.09e-09,31;UBERON:0003104,1.95e-08,61;UBERON:0009142,1.95e-08,61;UBERON:0004119,2.70e-08,118;UBERON:0000925,2.70e-08,118;UBERON:0006595,2.70e-08,118;UBERON:0005177,4.07e-08,79;UBERON:0001007,5.65e-08,116;UBERON:0001555,5.65e-08,116;UBERON:0007026,5.65e-08,116;UBERON:0005256,6.24e-08,45;UBERON:0009569,7.43e-08,66;UBERON:0005172,2.38e-07,49;UBERON:0005173,2.38e-07,49;UBERON:0002417,2.38e-07,49;UBERON:0000916,2.38e-07,49;UBERON:0004921,2.98e-07,114;UBERON:0003914,5.64e-07,47 | |||
|phase1_expression=51.5679287677437,83.4051224258073,85.5398570052328,77.4308380945485,96.672875879645,55.5680390028355,84.8013885361758,62.1083185753982,32.2406173727317,28.5558722112832,49.1395568807199,44.4330925604024,56.8386423371603,50.4415721957615,57.294879032294,81.5975327580999,83.9474253753776,77.1304994300891,70.0654755725325,74.6925787164533,45.7532901012755,86.0852546911675,93.2483247225999,161.432354598547,171.368732957176,120.014480500039,124.490216889973,113.553339625464,244.370117420897,153.234318894038,129.047157201387,33.0215950199008,28.9080450164748,31.6963362030877,105.430841209215,116.364251750945,100.042984568561,136.441311620232,168.768434417141,161.24531314393,104.11697338149,102.456822743767,120.892077904757,191.614956958829,219.886563815127,205.755909173245,26.6013057078333,37.5003268974368,43.0584918159565,52.107212951908,43.5357771254877,46.0008205967909,57.884999089919,50.7753499407941,39.6590682988108,54.5390004396208,54.154820148425,98.4933696249915,18.2084814773638,22.7466121086974,15.2119536841483,65.3969946893425,58.6934565433352,69.7422280893084,60.3208481165854,65.3641705750412,20.9720077362883,26.8952813725088,43.3422579449437,48.3321259227453,39.1204428113571,25.4229376119385,41.744154239855,37.8496569574208,36.3254335159116,45.041720543891,33.0347642998166,31.283397830871,43.1634358450044,19.5191705840687,43.1821677803374,28.129322010065,42.9941818462127,43.895483582471,41.5611233952923,15.0260578591571,28.4743361598206,42.3126742023432,137.670219479729,285.962783444076,64.3499164917725,279.637760018951,91.1161587168386,89.5907298118777,140.351706168697,117.831071306599,113.619535886587,182.360445158522,186.786137309463,180.909862149294,54.3655600337987,94.9615932865952,76.4415719119937,49.7746692207332,597.731764231962,616.17119283544,611.179054022873,96.7137461220438,40.3943098489588,75.408606644931,75.4661171432691,78.8565588828446,95.4748158640082,136.554712340676,103.242884865149,98.3969410111359,89.4845783198434,48.5853839250903,53.9612436689423,63.5743720293318,51.6769153197321,51.8816520854688,96.9237158334235,36.8903804234549,32.8831329697124,114.444760733449,81.5940997885317,124.779768046629,102.164462566744,51.9773518734735,50.7825669128675,60.3140890141749,44.1513773288382,50.1202296367448,56.3105600756408,51.9172041816824,80.4530974417499,62.3278922756566,97.2982619969648,38.5108596272247,81.4553972946525,83.2245618049172,65.0024288597311,69.6256258401004,48.9862793889561,48.9394411488126,51.3485450587314,39.3229123523304,67.2572137950468,60.70305173387,65.8057204373169,65.9779154607,72.0142375494299,51.8895728118028,59.0594731490798,78.0214325928493,122.887307779816,136.394390770799,112.244582261259,65.4517441212186,76.9245476737996,87.8702859929753,67.9457391129553,87.3633188958473,89.1663912489046,84.8748898338989,77.2627396030903,80.5680862333469,76.3557703598549,89.1429329949487,71.8269652576282,86.2579925809461,79.6966918506514,85.0868694940757,39.9550902271842,48.5709770430223,217.085140420355,81.9796756656987,77.4236349442899,85.2308585727809,59.9233695147734,72.6060688644033,82.5022542664469,106.145899370808,121.953968816939,165.193051588183,133.458995872943,136.285183348188,145.443208990864,100.667773769273,140.489732418551,123.666730690962,78.5225109945758,79.8597103142004,65.3704866903866,83.7006957444242,97.946006019651,91.2467016773044,100.293147879072,164.585314997256,172.855599353354,184.848951554857,190.915491844124,64.7359010178445,67.4197353238286,66.5591852659167,52.5407714396223,65.8413646124098,91.4106807895297,67.3208961634897,66.6375782045395,133.985969635784,58.9449646762154,139.924996323357,133.240086419917,134.877120823758,152.487801493625,163.065910220818,50.8071272958163,103.083328003144,68.6082550820929,78.2524845423617,88.0088431081883,60.3022526790537,72.1272231884622,56.7838915266195,59.2708141839278,68.6540537911202,52.4606188883133,60.9571530742545,61.9939084898565,73.6263708179894,193.012843442268,172.96200745435,47.7011344828465,40.2867649604909,59.0826171155074,59.1919017290626,205.574421502351,71.7017433260419,55.2139383978449,64.0319540646487,34.0368968417822,43.2533524294119,37.4301772458422,28.5907296096721,48.5772842009873,43.8383786866968,32.8088855695615,32.1321316421807,62.879457747263,72.4727006925729,77.6970796116558,53.615289966074,61.0627636363829,88.1293709242583,81.6273603804828,89.0215976447839,50.2013217897314,67.943167695608,77.2700596572981,58.1653967164009,78.072925866254,59.4149104919334,66.4137234022492,75.2889465711764,32.3417625466099,68.0630935438353,67.7839503021634,72.017243770615,60.1183392047307,59.7535538966936,65.4905101996441,51.7590413494819,90.5832793125922,76.6832096527029,48.2957191740367,35.9452031412427,44.8871106214617,40.1684080021518,39.7509905530444,33.6488844477376,131.457857320063,52.4753604689742,49.5525554313773,71.2034694473118,73.892616420515,69.3195921777263,57.8216583259936,58.7959905140763,85.1591934269215,87.0498033453153,87.2041834705914,170.886040624705,68.1704066167347,69.7385772245091,85.6482352716884,84.6807598858598,80.1390608948472,79.8396930598139,70.9993184680636,148.939130988913,114.709251363237,42.2510732899109,21.4203316699992,64.7406644370428,86.369332018605,67.4745623553845,109.398370485638,97.487684408179,72.2920590057844,65.4928055765069,55.5754525456268,27.5405897741647,26.2107305694658,46.7696458529704,83.3200634842575,66.4539892856432,62.4919158523194,44.5776472212029,43.3125353423157,55.0495158801457,54.6451250545936,54.9257487717923,47.3244269327549,49.4048307170519,47.9492773239582,44.0650234712709,50.4908217424378,71.4200708387916,44.8411625815611,76.1670642614449,209.687885838734,107.60660387593,101.348536743638,51.6487580433688,64.953618860957,59.1855082761729,34.4498623996411,40.9689460491387,51.5605962095457,54.8211651676363,36.309373547844,37.769694869485,37.1262375127493,40.9792294934041,41.6891016265468,31.583379016861,71.8208445282502,40.7005370869052,65.0495037923251,49.1075568477954,59.739751348975,61.0360448054047,56.4506688616103,61.6044821144294,51.6679927442823,52.0556256233423,53.4841322768406,49.9859804673102,55.2484894072306,56.8543353355239,54.0467762872321,49.5345438934397,57.5945099945932,58.4514938005026,65.5216582277258,72.4218687061235,58.630642157906,61.0516773188121,63.1855903360401,50.7258994046827,57.5949408141823,57.9610064057984,70.2443415831447,65.7674278594607,63.5563252798633,72.3873530438483,52.7925830652575,61.7623104494783,63.4308116913018,49.5797891795091,56.7145436284556,47.4640098082097,61.290081412697,57.1557003768473,65.6118978996133,64.633285802018,70.951557699849 | |phase1_expression=51.5679287677437,83.4051224258073,85.5398570052328,77.4308380945485,96.672875879645,55.5680390028355,84.8013885361758,62.1083185753982,32.2406173727317,28.5558722112832,49.1395568807199,44.4330925604024,56.8386423371603,50.4415721957615,57.294879032294,81.5975327580999,83.9474253753776,77.1304994300891,70.0654755725325,74.6925787164533,45.7532901012755,86.0852546911675,93.2483247225999,161.432354598547,171.368732957176,120.014480500039,124.490216889973,113.553339625464,244.370117420897,153.234318894038,129.047157201387,33.0215950199008,28.9080450164748,31.6963362030877,105.430841209215,116.364251750945,100.042984568561,136.441311620232,168.768434417141,161.24531314393,104.11697338149,102.456822743767,120.892077904757,191.614956958829,219.886563815127,205.755909173245,26.6013057078333,37.5003268974368,43.0584918159565,52.107212951908,43.5357771254877,46.0008205967909,57.884999089919,50.7753499407941,39.6590682988108,54.5390004396208,54.154820148425,98.4933696249915,18.2084814773638,22.7466121086974,15.2119536841483,65.3969946893425,58.6934565433352,69.7422280893084,60.3208481165854,65.3641705750412,20.9720077362883,26.8952813725088,43.3422579449437,48.3321259227453,39.1204428113571,25.4229376119385,41.744154239855,37.8496569574208,36.3254335159116,45.041720543891,33.0347642998166,31.283397830871,43.1634358450044,19.5191705840687,43.1821677803374,28.129322010065,42.9941818462127,43.895483582471,41.5611233952923,15.0260578591571,28.4743361598206,42.3126742023432,137.670219479729,285.962783444076,64.3499164917725,279.637760018951,91.1161587168386,89.5907298118777,140.351706168697,117.831071306599,113.619535886587,182.360445158522,186.786137309463,180.909862149294,54.3655600337987,94.9615932865952,76.4415719119937,49.7746692207332,597.731764231962,616.17119283544,611.179054022873,96.7137461220438,40.3943098489588,75.408606644931,75.4661171432691,78.8565588828446,95.4748158640082,136.554712340676,103.242884865149,98.3969410111359,89.4845783198434,48.5853839250903,53.9612436689423,63.5743720293318,51.6769153197321,51.8816520854688,96.9237158334235,36.8903804234549,32.8831329697124,114.444760733449,81.5940997885317,124.779768046629,102.164462566744,51.9773518734735,50.7825669128675,60.3140890141749,44.1513773288382,50.1202296367448,56.3105600756408,51.9172041816824,80.4530974417499,62.3278922756566,97.2982619969648,38.5108596272247,81.4553972946525,83.2245618049172,65.0024288597311,69.6256258401004,48.9862793889561,48.9394411488126,51.3485450587314,39.3229123523304,67.2572137950468,60.70305173387,65.8057204373169,65.9779154607,72.0142375494299,51.8895728118028,59.0594731490798,78.0214325928493,122.887307779816,136.394390770799,112.244582261259,65.4517441212186,76.9245476737996,87.8702859929753,67.9457391129553,87.3633188958473,89.1663912489046,84.8748898338989,77.2627396030903,80.5680862333469,76.3557703598549,89.1429329949487,71.8269652576282,86.2579925809461,79.6966918506514,85.0868694940757,39.9550902271842,48.5709770430223,217.085140420355,81.9796756656987,77.4236349442899,85.2308585727809,59.9233695147734,72.6060688644033,82.5022542664469,106.145899370808,121.953968816939,165.193051588183,133.458995872943,136.285183348188,145.443208990864,100.667773769273,140.489732418551,123.666730690962,78.5225109945758,79.8597103142004,65.3704866903866,83.7006957444242,97.946006019651,91.2467016773044,100.293147879072,164.585314997256,172.855599353354,184.848951554857,190.915491844124,64.7359010178445,67.4197353238286,66.5591852659167,52.5407714396223,65.8413646124098,91.4106807895297,67.3208961634897,66.6375782045395,133.985969635784,58.9449646762154,139.924996323357,133.240086419917,134.877120823758,152.487801493625,163.065910220818,50.8071272958163,103.083328003144,68.6082550820929,78.2524845423617,88.0088431081883,60.3022526790537,72.1272231884622,56.7838915266195,59.2708141839278,68.6540537911202,52.4606188883133,60.9571530742545,61.9939084898565,73.6263708179894,193.012843442268,172.96200745435,47.7011344828465,40.2867649604909,59.0826171155074,59.1919017290626,205.574421502351,71.7017433260419,55.2139383978449,64.0319540646487,34.0368968417822,43.2533524294119,37.4301772458422,28.5907296096721,48.5772842009873,43.8383786866968,32.8088855695615,32.1321316421807,62.879457747263,72.4727006925729,77.6970796116558,53.615289966074,61.0627636363829,88.1293709242583,81.6273603804828,89.0215976447839,50.2013217897314,67.943167695608,77.2700596572981,58.1653967164009,78.072925866254,59.4149104919334,66.4137234022492,75.2889465711764,32.3417625466099,68.0630935438353,67.7839503021634,72.017243770615,60.1183392047307,59.7535538966936,65.4905101996441,51.7590413494819,90.5832793125922,76.6832096527029,48.2957191740367,35.9452031412427,44.8871106214617,40.1684080021518,39.7509905530444,33.6488844477376,131.457857320063,52.4753604689742,49.5525554313773,71.2034694473118,73.892616420515,69.3195921777263,57.8216583259936,58.7959905140763,85.1591934269215,87.0498033453153,87.2041834705914,170.886040624705,68.1704066167347,69.7385772245091,85.6482352716884,84.6807598858598,80.1390608948472,79.8396930598139,70.9993184680636,148.939130988913,114.709251363237,42.2510732899109,21.4203316699992,64.7406644370428,86.369332018605,67.4745623553845,109.398370485638,97.487684408179,72.2920590057844,65.4928055765069,55.5754525456268,27.5405897741647,26.2107305694658,46.7696458529704,83.3200634842575,66.4539892856432,62.4919158523194,44.5776472212029,43.3125353423157,55.0495158801457,54.6451250545936,54.9257487717923,47.3244269327549,49.4048307170519,47.9492773239582,44.0650234712709,50.4908217424378,71.4200708387916,44.8411625815611,76.1670642614449,209.687885838734,107.60660387593,101.348536743638,51.6487580433688,64.953618860957,59.1855082761729,34.4498623996411,40.9689460491387,51.5605962095457,54.8211651676363,36.309373547844,37.769694869485,37.1262375127493,40.9792294934041,41.6891016265468,31.583379016861,71.8208445282502,40.7005370869052,65.0495037923251,49.1075568477954,59.739751348975,61.0360448054047,56.4506688616103,61.6044821144294,51.6679927442823,52.0556256233423,53.4841322768406,49.9859804673102,55.2484894072306,56.8543353355239,54.0467762872321,49.5345438934397,57.5945099945932,58.4514938005026,65.5216582277258,72.4218687061235,58.630642157906,61.0516773188121,63.1855903360401,50.7258994046827,57.5949408141823,57.9610064057984,70.2443415831447,65.7674278594607,63.5563252798633,72.3873530438483,52.7925830652575,61.7623104494783,63.4308116913018,49.5797891795091,56.7145436284556,47.4640098082097,61.290081412697,57.1557003768473,65.6118978996133,64.633285802018,70.951557699849 | ||
|short_description=p1@Esd,p1@Gm2904 | |short_description=p1@Esd,p1@Gm2904 | ||
}} | }} |
Latest revision as of 09:34, 26 September 2015
Short description: | p1@Esd, p1@Gm2904 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Esd_5end, CAGE_peak_1_at_Gm2904_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | 0bp_to_ENSMUST00000022573, NM_016903, uc007uqd.1_5end |
EntrezGene: | 100040682,13885 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 5.45e-10 | 90 |
gastrointestinal system | 1.19e-09 | 47 |
intestine | 2.09e-09 | 31 |
mesenchyme | 1.95e-08 | 61 |
entire embryonic mesenchyme | 1.95e-08 | 61 |
endoderm-derived structure | 2.70e-08 | 118 |
endoderm | 2.70e-08 | 118 |
presumptive endoderm | 2.70e-08 | 118 |
trunk region element | 4.07e-08 | 79 |
digestive system | 5.65e-08 | 116 |
digestive tract | 5.65e-08 | 116 |
primitive gut | 5.65e-08 | 116 |
trunk mesenchyme | 6.24e-08 | 45 |
subdivision of trunk | 7.43e-08 | 66 |
abdomen element | 2.38e-07 | 49 |
abdominal segment element | 2.38e-07 | 49 |
abdominal segment of trunk | 2.38e-07 | 49 |
abdomen | 2.38e-07 | 49 |
subdivision of digestive tract | 2.98e-07 | 114 |
epithelial tube | 5.64e-07 | 47 |