Personal tools

FFCP PHASE1:Mm9::chr2:79095711..79095809,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16401
|EntrezGene=16401
|HGNC=
|HGNC=
|MCL_coexpression_id=320
|MCL_coexpression_id=320
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000141094_5end
|association_with_transcript=0bp_to_ENSMUST00000141094_5end
|cluster_id=chr2:79095711..79095809,+
|description=CAGE_peak_1_at_Itga4_5end
|description=CAGE_peak_1_at_Itga4_5end
|id=chr2:79095711..79095809,+
|id=chr2:79095711..79095809,+
|ontology_enrichment_celltype=CL:0000988!7.10e-08!32;CL:0002032!7.10e-08!32;CL:0000037!7.10e-08!32;CL:0000566!7.10e-08!32;CL:0000837!7.10e-08!32
|ontology_enrichment_celltype=CL:0000988!7.10e-08!32;CL:0002032!7.10e-08!32;CL:0000037!7.10e-08!32;CL:0000566!7.10e-08!32;CL:0000837!7.10e-08!32
|ontology_enrichment_celltype_v019_2=CL:0000988,7.60e-08,32;CL:0002032,7.60e-08,32;CL:0000037,7.60e-08,32;CL:0000837,7.60e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!2.20e-09!48;UBERON:0002390!3.19e-08!45;UBERON:0003061!3.19e-08!45;UBERON:0002405!5.71e-08!70;UBERON:0001474!6.24e-07!22;UBERON:0004765!6.24e-07!22;UBERON:0001434!6.24e-07!22
|ontology_enrichment_uberon=UBERON:0002193!2.20e-09!48;UBERON:0002390!3.19e-08!45;UBERON:0003061!3.19e-08!45;UBERON:0002405!5.71e-08!70;UBERON:0001474!6.24e-07!22;UBERON:0004765!6.24e-07!22;UBERON:0001434!6.24e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.04e-09,48;UBERON:0002405,2.04e-09,48;UBERON:0002390,2.97e-08,45;UBERON:0003061,2.97e-08,45;UBERON:0001474,6.12e-07,22;UBERON:0004765,6.12e-07,22;UBERON:0001434,6.12e-07,22
|phase1_expression=5.60520964866779,0,0,0,0,0,0,51.1328360828642,4.92760527530834,3.04283884218592,1.02730780935303,0.558405112967355,43.4849854025263,25.8764391160232,63.6239645067916,68.8415909125408,53.1667027377391,153.787805612141,161.246573920349,103.975464690517,4.59233766815777,255.773490293481,292.543763835608,26.7187346064989,25.9232487605902,0,0,0,1.14014051673824,2.01624103807945,2.66076612786366,17.14582818341,17.221814052368,0,0.288851619751275,0,0,47.2940742732706,45.3174499823804,29.8408534065065,39.411509698078,42.3488200674236,35.9277661243054,0.251793635951155,0.101376931219515,0,0,0,0.219686182734472,0,0,0,72.4820858169421,39.1695556686126,50.4140698713696,4.63066984864705,2.0057340795713,10.3134418455488,2.22548106945558,1.5869729378161,2.53532561402472,0.677689064138264,0,10.7987966073768,15.8218618010716,13.4991221839759,5.39280198933128,2.30530983192933,3.11068836925433,2.56511282830212,2.73422449756797,2.57085885963423,1.10434270475807,2.32732518508413,0.958454710182364,0.919218786610021,0,1.14918604276669,0.921639199537461,1.97829431595291,3.7509933876988,3.12548022334056,1.3959149950069,1.68828783009504,1.68078072554491,5.89257170947335,4.12877874317399,3.35519002485541,1.59025005999687,4.30757892608677,1.73918693221007,4.30211938490693,0,0.539703191637817,1.94932925234301,0.448026887097336,8.98844288843212,0,0,0,6.90132756905734,0,0,0,0.216491041011214,0,0,6.96521666286266,110.048600550048,8.75808620482466,6.7659277438793,6.39377504455497,3.92046345335299,4.6724018571313,7.4080885495494,2.63899841792318,4.20231445148436,13.3031408366319,57.4996858767418,16.3384518446883,32.9053862505986,32.0017667069247,7.45567044872489,2.04946557908083,1.46612694769419,12.0064815948038,46.1288229347793,27.5955256256968,39.3917703926501,1.3481157546434,1.83000241127451,2.01046963380583,3.47648640384553,4.09144731728529,2.90903262383384,3.0825839982874,18.6366035846079,36.078021476927,1.76905930903572,2.31486041475121,7.80722657776222,5.74755261083682,7.92273371143537,8.43946979880004,5.10273743634959,6.79002717509704,7.87094486301722,5.17406741478031,4.31135985865684,10.2117283290622,10.7330185740009,13.1517439456545,13.6243152120543,8.358051996532,8.64284972913362,10.9468846750171,30.1951670544691,31.9111404822247,32.110475431702,17.3985648929822,14.7751417788091,5.94204802821349,9.46978942340841,4.32881309844288,3.39387648352232,2.09280550275367,2.41446061259657,1.86824547787471,4.11399624783701,4.92502392237286,3.97237166774693,3.07019973593198,6.58650345873152,5.09984391289413,3.36463917702604,5.9684675179985,4.95628174475697,4.49565963328025,11.5175655289026,10.4506502337197,8.37638498593607,6.85723983719365,7.33847544688072,6.84812254005213,13.2868137232463,5.92916237006439,10.0534083520108,9.35095418593409,14.2323783596958,13.4822911298133,9.07779809473716,9.16049856970089,3.98302592001472,8.79713547094912,9.01661885384643,7.94240178596726,6.40043207653165,6.0316805105674,16.8841554121767,5.75679577120448,3.1399745568275,3.33172342588861,2.37162101669719,26.528371808859,26.9285823305088,33.0547305205735,30.0232979654984,32.3177394068239,22.9163266603278,22.4402987211632,22.5367965217299,15.6500005517206,25.8782771749238,17.8627654880882,10.9213185590096,4.54641980304801,3.22915344339442,1.92977408545347,47.666323062984,10.2325362356062,13.3631280682461,11.2031756611624,11.7345124144251,19.5982321206924,22.8521895250573,13.6593553500459,44.2954754938397,42.9641497918623,33.9638657240448,35.3944759785994,39.5448608472901,23.5777965487864,66.3481649332798,108.781136763742,5.4094070032094,6.34654516500885,2.88991061978026,3.16471553798949,0,13.6334300690361,36.5989534522858,37.8725581967739,20.6806461823487,92.4809248076376,67.5079982469654,65.3906786122203,47.3628520959626,53.4828219977701,41.505216684385,2.89189184779626,4.68402281187286,2.84904965867608,5.53815661802159,9.23832688646199,5.30980553359851,4.37005145078967,1.81394134178851,3.96070667487386,1.77181135728464,8.30074899448604,8.26970538138308,10.5424781548477,8.19943970284859,4.74055136903724,4.21674434299995,6.18813259489121,1.36175842301515,9.00305470156551,4.91562998374467,5.78709994585299,5.85222771019503,4.45922044005176,4.11372551505302,0.608929898229199,7.50949465803873,4.87213762986786,0.882113592219848,4.122156323537,6.29711264114032,7.59942854094764,5.84924485615369,2.46211349617592,15.1570035047522,2.41052892613663,70.0570611271196,32.1963514022627,37.224100001312,59.3360639564777,81.33306549401,62.4564412853807,26.5166350790414,30.3694651542338,29.2983944465378,0,6.64305586520384,8.74273708645449,8.10040056163509,9.19988502463662,5.02233896616208,6.74321731924104,10.083721598491,6.28214260761671,10.628427809927,10.5627683224777,0,29.7537926627518,23.9914811162792,32.8622508301441,29.8359192233559,33.7912250981556,25.9359497407116,11.3277814814237,2.20204623293993,0.241584120826006,1.72818003754719,18.3286449964343,46.4240743014476,40.0572732942826,29.2321851700039,20.2300166104254,18.6760473494389,21.8755718126343,18.4611908968222,13.8324036428962,13.641018391245,10.4859232542314,12.1822350924691,14.0469288794881,21.154719294864,0.680191150845634,0,0,0,7.14801497919105,10.8855835761686,7.14291334642334,4.07299920250225,6.01886524842436,7.34177395402186,10.5874804396651,12.6037012956667,10.8267504876523,7.53590771747707,6.0431511791176,9.45031500324528,9.90706647093285,9.5159905886683,8.28416498802912,3.42498247027783,10.3746467084268,9.73181552798565,17.5036836289172,5.03071590307158,3.8607136774503,12.0013233012872,12.5681384915725,9.62757628775446,14.6564382823003,11.1530891951705,10.7517014590063,10.4878488366268,10.9483010612326,10.5681262878328,10.0021675169445,9.73428337936786,9.83837024364896,11.9504911232959,10.5983222496766,13.7147700954166,11.0034999818789,10.2527561677348,12.7904846636449,10.9166881281784,10.0691383391095,11.7073902638574,8.68130047744881,11.4075455630524,11.7839877048125,10.0839765405548,9.35792582567853,8.18462086339379,10.6906420418317,12.7318363247553,8.24374907195222,10.9947855969342,12.0327790267047,11.8598765882683,11.0295709559758,14.839541479707
|phase1_expression=5.60520964866779,0,0,0,0,0,0,51.1328360828642,4.92760527530834,3.04283884218592,1.02730780935303,0.558405112967355,43.4849854025263,25.8764391160232,63.6239645067916,68.8415909125408,53.1667027377391,153.787805612141,161.246573920349,103.975464690517,4.59233766815777,255.773490293481,292.543763835608,26.7187346064989,25.9232487605902,0,0,0,1.14014051673824,2.01624103807945,2.66076612786366,17.14582818341,17.221814052368,0,0.288851619751275,0,0,47.2940742732706,45.3174499823804,29.8408534065065,39.411509698078,42.3488200674236,35.9277661243054,0.251793635951155,0.101376931219515,0,0,0,0.219686182734472,0,0,0,72.4820858169421,39.1695556686126,50.4140698713696,4.63066984864705,2.0057340795713,10.3134418455488,2.22548106945558,1.5869729378161,2.53532561402472,0.677689064138264,0,10.7987966073768,15.8218618010716,13.4991221839759,5.39280198933128,2.30530983192933,3.11068836925433,2.56511282830212,2.73422449756797,2.57085885963423,1.10434270475807,2.32732518508413,0.958454710182364,0.919218786610021,0,1.14918604276669,0.921639199537461,1.97829431595291,3.7509933876988,3.12548022334056,1.3959149950069,1.68828783009504,1.68078072554491,5.89257170947335,4.12877874317399,3.35519002485541,1.59025005999687,4.30757892608677,1.73918693221007,4.30211938490693,0,0.539703191637817,1.94932925234301,0.448026887097336,8.98844288843212,0,0,0,6.90132756905734,0,0,0,0.216491041011214,0,0,6.96521666286266,110.048600550048,8.75808620482466,6.7659277438793,6.39377504455497,3.92046345335299,4.6724018571313,7.4080885495494,2.63899841792318,4.20231445148436,13.3031408366319,57.4996858767418,16.3384518446883,32.9053862505986,32.0017667069247,7.45567044872489,2.04946557908083,1.46612694769419,12.0064815948038,46.1288229347793,27.5955256256968,39.3917703926501,1.3481157546434,1.83000241127451,2.01046963380583,3.47648640384553,4.09144731728529,2.90903262383384,3.0825839982874,18.6366035846079,36.078021476927,1.76905930903572,2.31486041475121,7.80722657776222,5.74755261083682,7.92273371143537,8.43946979880004,5.10273743634959,6.79002717509704,7.87094486301722,5.17406741478031,4.31135985865684,10.2117283290622,10.7330185740009,13.1517439456545,13.6243152120543,8.358051996532,8.64284972913362,10.9468846750171,30.1951670544691,31.9111404822247,32.110475431702,17.3985648929822,14.7751417788091,5.94204802821349,9.46978942340841,4.32881309844288,3.39387648352232,2.09280550275367,2.41446061259657,1.86824547787471,4.11399624783701,4.92502392237286,3.97237166774693,3.07019973593198,6.58650345873152,5.09984391289413,3.36463917702604,5.9684675179985,4.95628174475697,4.49565963328025,11.5175655289026,10.4506502337197,8.37638498593607,6.85723983719365,7.33847544688072,6.84812254005213,13.2868137232463,5.92916237006439,10.0534083520108,9.35095418593409,14.2323783596958,13.4822911298133,9.07779809473716,9.16049856970089,3.98302592001472,8.79713547094912,9.01661885384643,7.94240178596726,6.40043207653165,6.0316805105674,16.8841554121767,5.75679577120448,3.1399745568275,3.33172342588861,2.37162101669719,26.528371808859,26.9285823305088,33.0547305205735,30.0232979654984,32.3177394068239,22.9163266603278,22.4402987211632,22.5367965217299,15.6500005517206,25.8782771749238,17.8627654880882,10.9213185590096,4.54641980304801,3.22915344339442,1.92977408545347,47.666323062984,10.2325362356062,13.3631280682461,11.2031756611624,11.7345124144251,19.5982321206924,22.8521895250573,13.6593553500459,44.2954754938397,42.9641497918623,33.9638657240448,35.3944759785994,39.5448608472901,23.5777965487864,66.3481649332798,108.781136763742,5.4094070032094,6.34654516500885,2.88991061978026,3.16471553798949,0,13.6334300690361,36.5989534522858,37.8725581967739,20.6806461823487,92.4809248076376,67.5079982469654,65.3906786122203,47.3628520959626,53.4828219977701,41.505216684385,2.89189184779626,4.68402281187286,2.84904965867608,5.53815661802159,9.23832688646199,5.30980553359851,4.37005145078967,1.81394134178851,3.96070667487386,1.77181135728464,8.30074899448604,8.26970538138308,10.5424781548477,8.19943970284859,4.74055136903724,4.21674434299995,6.18813259489121,1.36175842301515,9.00305470156551,4.91562998374467,5.78709994585299,5.85222771019503,4.45922044005176,4.11372551505302,0.608929898229199,7.50949465803873,4.87213762986786,0.882113592219848,4.122156323537,6.29711264114032,7.59942854094764,5.84924485615369,2.46211349617592,15.1570035047522,2.41052892613663,70.0570611271196,32.1963514022627,37.224100001312,59.3360639564777,81.33306549401,62.4564412853807,26.5166350790414,30.3694651542338,29.2983944465378,0,6.64305586520384,8.74273708645449,8.10040056163509,9.19988502463662,5.02233896616208,6.74321731924104,10.083721598491,6.28214260761671,10.628427809927,10.5627683224777,0,29.7537926627518,23.9914811162792,32.8622508301441,29.8359192233559,33.7912250981556,25.9359497407116,11.3277814814237,2.20204623293993,0.241584120826006,1.72818003754719,18.3286449964343,46.4240743014476,40.0572732942826,29.2321851700039,20.2300166104254,18.6760473494389,21.8755718126343,18.4611908968222,13.8324036428962,13.641018391245,10.4859232542314,12.1822350924691,14.0469288794881,21.154719294864,0.680191150845634,0,0,0,7.14801497919105,10.8855835761686,7.14291334642334,4.07299920250225,6.01886524842436,7.34177395402186,10.5874804396651,12.6037012956667,10.8267504876523,7.53590771747707,6.0431511791176,9.45031500324528,9.90706647093285,9.5159905886683,8.28416498802912,3.42498247027783,10.3746467084268,9.73181552798565,17.5036836289172,5.03071590307158,3.8607136774503,12.0013233012872,12.5681384915725,9.62757628775446,14.6564382823003,11.1530891951705,10.7517014590063,10.4878488366268,10.9483010612326,10.5681262878328,10.0021675169445,9.73428337936786,9.83837024364896,11.9504911232959,10.5983222496766,13.7147700954166,11.0034999818789,10.2527561677348,12.7904846636449,10.9166881281784,10.0691383391095,11.7073902638574,8.68130047744881,11.4075455630524,11.7839877048125,10.0839765405548,9.35792582567853,8.18462086339379,10.6906420418317,12.7318363247553,8.24374907195222,10.9947855969342,12.0327790267047,11.8598765882683,11.0295709559758,14.839541479707
|short_description=p1@Itga4
|short_description=p1@Itga4
}}
}}

Latest revision as of 00:47, 27 September 2015

Short description:p1@Itga4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Itga4_5end
Coexpression cluster:MCL_coexpression_mm9:320
Association with transcript: 0bp_to_ENSMUST00000141094_5end
EntrezGene:Itga4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Itga4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E951.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E443.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A163.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A368.84
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A553.17
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2153.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4161.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6103.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2255.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9292.54
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D126.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G847.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H145.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G939.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H242.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H435.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A272.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.17
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A150.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E715.82
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H9110.05
adrenal gland, adult.CNhs10508.49-24D78.76
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H113.30
bone (os femoris), adult.CNhs10483.56-12G257.50
bone (os femoris), neonate N02.CNhs11227.1985-43F516.34
bone (os femoris), neonate N16.CNhs11225.1525-43A632.91
bone (os femoris), neonate N20.CNhs11195.1350-25C332.00
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H712.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C746.13
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D127.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D439.39
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A236.08
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C67.81
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C97.92
eyeball, embryo E17.CNhs11023.1261-18D48.44
eyeball, neonate N00.CNhs11207.633-15C65.10
eyeball, neonate N01.CNhs11140.1532-43E76.79
eyeball, neonate N02.CNhs11205.1551-44G87.87
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A813.15
forelimb, embryo E15.CNhs11007.437-20E713.62
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I610.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C830.20
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D231.91
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D532.11
heart, embryo E11.CNhs10586.331-24E917.40
heart, embryo E12.CNhs11015.353-12F514.78
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G13.97
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D88.38
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A514.23
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F88.80
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G76.03
kidney, neonate N10.CNhs11206.758-6D516.88
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F826.53
liver, embryo E13.CNhs10524.378-3H626.93
liver, embryo E14.CNhs10594.409-16E133.05
liver, embryo E15.CNhs10520.433-16D730.02
liver, embryo E16.CNhs10523.462-17F532.32
liver, embryo E17.CNhs10510.481-18A322.92
liver, embryo E18.CNhs10579.499-43G422.44
liver, neonate N00.CNhs11117.641-24F422.54
liver, neonate N03.CNhs11123.1345-25G215.65
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H217.86
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B147.67
lung, embryo E12.CNhs10522.354-16G210.23
lung, embryo E14.CNhs10604.404-26F813.36
lung, embryo E15.CNhs11020.432-17C511.20
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A619.60
lung, embryo E18.CNhs10583.1287-20I622.85
lung, neonate N00.CNhs11224.640-42C613.66
lung, neonate N06.CNhs11212.683-20E544.30
lung, neonate N07.CNhs11111.715-19A342.96
lung, neonate N10.CNhs11219.750-23E633.96
lung, neonate N20.CNhs11109.822-18A435.39
lung, neonate N25.CNhs11119.1359-25C739.54
lung, neonate N30.CNhs11133.1394-42H223.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A166.35
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1108.78
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.63
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E136.60
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E237.87
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D792.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D867.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D965.39
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D447.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D553.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D641.51
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E69.00
pituitary gland, embryo E13.CNhs11009.370-44C74.92
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I77.51
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H37.60
skin, neonate N06.CNhs11097.693-20I55.85
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G270.06
spleen, embryo E16.CNhs11035.461-43C132.20
spleen, embryo E18.CNhs11011.1271-21F237.22
spleen, neonate N10.CNhs11116.752-24D159.34
spleen, neonate N20.CNhs11112.824-19H181.33
spleen, neonate N25.CNhs11099.1354-25G362.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C626.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C930.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.30
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G88.74
stomach, embryo E16.CNhs11022.459-17D48.10
stomach, embryo E17.CNhs11006.1035-18D59.20
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A910.08
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I110.63
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F529.75
testis, embryo E15.CNhs11034.443-27C523.99
testis, embryo E16.CNhs11033.470-26G532.86
testis, embryo E17.CNhs11029.486-18I529.84
testis, embryo E18.CNhs11027.503-18G533.79
testis, neonate N00.CNhs11189.1300-22B725.94
testis, neonate N07.CNhs11222.726-26I411.33
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B518.33
thymus, embryo E14.CNhs11041.402-44I446.42
thymus, embryo E15.CNhs11005.430-45I240.06
thymus, embryo E16.CNhs11002.456-26C529.23
thymus, embryo E17.CNhs10581.478-18C120.23
thymus, embryo E18.CNhs10595.1273-19G418.68
thymus, neonate N02.CNhs11181.1541-43F821.88
thymus, neonate N03.CNhs11137.2104-43C718.46
thymus, neonate N06.CNhs11197.681-26C413.83
thymus, neonate N07.CNhs11211.713-19D313.64
thymus, neonate N10.CNhs11194.748-24E410.49
thymus, neonate N20.CNhs11186.820-7A212.18
thymus, neonate N25.CNhs11125.1362-25G714.05
thymus, neonate N30.CNhs11132.1393-42G221.15
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F510.89
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I83.42
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H29.73
whole body, embryo E14.5.CNhs10578.420-27D217.50
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.69
whole body, embryo E17.5.CNhs10513.490-9F912.73
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C212.03
whole body, neonate N01.CNhs10576.659-23C611.86
whole body, neonate N06.CNhs10515.692-21D111.03
whole body, neonate N10.CNhs10518.761-6B414.84





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.04e-0948
immune system2.04e-0948
hematopoietic system2.97e-0845
blood island2.97e-0845
bone element6.12e-0722
skeletal element6.12e-0722
skeletal system6.12e-0722
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:79095711..79095809,%2B&oldid=4283483"