FFCP PHASE1:Hg19::chr3:191075002..191075014,+: Difference between revisions
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|id=chr3:191075002..191075014,+
|short_description=p@chr3:191075002..191075014,+
|description=CAGE_peak_at_chr3:191075002..191075014,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:191075002..191075014,+ | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_at_chr3:191075002..191075014,+ | |||
|id=chr3:191075002..191075014,+ | |||
|ontology_enrichment_celltype=CL:0000076!9.85e-11!62;CL:0002097!3.66e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002544;9.49e-20;6!CL:0002097;1.15e-15;2!CL:0002545;2.05e-15;2!CL:1000413;1.58e-13;9!CL:0000174;6.73e-11;3!CL:0002592;9.90e-11;3!CL:0000076;1.37e-07;63!CL:0000071;3.04e-07;18!CL:0000077;5.83e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002544,7.13e-20,6;CL:0002097,1.15e-15,2;CL:0002545,1.78e-15,2;CL:1000413,1.31e-13,9;CL:0000076,1.45e-11,63;CL:0000174,6.73e-11,3;CL:0002592,9.90e-11,3;CL:0000213,2.62e-08,58;CL:0000215,2.62e-08,58;CL:0000071,2.77e-07,18;CL:0002546,2.77e-07,18;CL:0000077,6.19e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;3.04e-07;18 | |||
|ontology_enrichment_disease=DOID:4231!5.56e-07!2;DOID:1907!5.56e-07!2;DOID:1749!9.19e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!5.09e-10!3;UBERON:0001235!5.09e-10!3;UBERON:0006858!5.09e-10!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005800;2.05e-15;2!UBERON:0001515;2.05e-15;2!UBERON:0003915;1.58e-13;9!UBERON:0004700;1.58e-13;9!UBERON:0001917;1.58e-13;9!UBERON:0002369;6.73e-11;3!UBERON:0001235;6.73e-11;3!UBERON:0006858;6.73e-11;3!UBERON:0003498;9.90e-11;3!UBERON:0005985;9.90e-11;3!UBERON:0001621;9.90e-11;3!UBERON:0004573;7.94e-08;33!UBERON:0004571;7.94e-08;33!UBERON:0004638;3.04e-07;18!UBERON:0001986;3.04e-07;18!UBERON:0004852;3.04e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005800,1.78e-15,2;UBERON:0001515,1.78e-15,2;UBERON:0003915,1.31e-13,9;UBERON:0004700,1.31e-13,9;UBERON:0001917,1.31e-13,9;UBERON:0002369,6.73e-11,3;UBERON:0001235,6.73e-11,3;UBERON:0006858,6.73e-11,3;UBERON:0001621,9.90e-11,3;UBERON:0004573,1.96e-08,33;UBERON:0004571,1.96e-08,33;UBERON:0004638,2.77e-07,18;UBERON:0001986,2.77e-07,18;UBERON:0004852,2.77e-07,18;UBERON:0003498,6.04e-07,5;UBERON:0005985,6.04e-07,5;UBERON:0001637,9.24e-07,42;UBERON:0003509,9.24e-07,42;UBERON:0004572,9.24e-07,42 | |||
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| ||
|short_description=p@chr3:191075002..191075014,+ | |||
}} | }} |
Latest revision as of 19:28, 29 July 2015
Short description: | p@chr3:191075002..191075014, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:191075002..191075014, + |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic endothelial cell | 7.13e-20 | 6 |
cortical cell of adrenal gland | 1.15e-15 | 2 |
thoracic aorta endothelial cell | 1.78e-15 | 2 |
endothelial cell of artery | 1.31e-13 | 9 |
squamous epithelial cell | 1.45e-11 | 63 |
steroid hormone secreting cell | 6.73e-11 | 3 |
smooth muscle cell of the coronary artery | 9.90e-11 | 3 |
lining cell | 2.62e-08 | 58 |
barrier cell | 2.62e-08 | 58 |
blood vessel endothelial cell | 2.77e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.77e-07 | 18 |
mesothelial cell | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 1.78e-15 | 2 |
thoracic aorta | 1.78e-15 | 2 |
endothelial tube | 1.31e-13 | 9 |
arterial system endothelium | 1.31e-13 | 9 |
endothelium of artery | 1.31e-13 | 9 |
adrenal gland | 6.73e-11 | 3 |
adrenal cortex | 6.73e-11 | 3 |
adrenal/interrenal gland | 6.73e-11 | 3 |
coronary artery | 9.90e-11 | 3 |
systemic artery | 1.96e-08 | 33 |
systemic arterial system | 1.96e-08 | 33 |
blood vessel endothelium | 2.77e-07 | 18 |
endothelium | 2.77e-07 | 18 |
cardiovascular system endothelium | 2.77e-07 | 18 |
heart blood vessel | 6.04e-07 | 5 |
coronary vessel | 6.04e-07 | 5 |
artery | 9.24e-07 | 42 |
arterial blood vessel | 9.24e-07 | 42 |
arterial system | 9.24e-07 | 42 |