FFCP PHASE1:Hg19::chr3:42893935..42893942,-: Difference between revisions
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|id=chr3:42893935..42893942,-
|short_description=p1@ENST00000449063
|description=CAGE_peak_1_at_ENST00000449063_5end
|association_with_transcript=-15bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000449063_5end | |||
|cluster_id=chr3:42893935..42893942,- | |||
|coexpression_cluster_id=C731 | |||
|description=CAGE_peak_1_at_ENST00000449063_5end | |||
|id=chr3:42893935..42893942,- | |||
|ontology_enrichment_celltype=CL:0002580!3.52e-15!3;CL:0002617!2.34e-11!2;CL:0000764!7.73e-11!2;CL:0000765!7.73e-11!2;CL:0000050!7.73e-11!2;CL:0000038!7.73e-11!2;CL:0000558!7.73e-11!2;CL:0000547!7.73e-11!2;CL:0000549!7.73e-11!2;CL:0000550!7.73e-11!2;CL:0000552!7.73e-11!2;CL:0002334!4.51e-10!12;CL:0000136!2.68e-08!15;CL:0002579!1.15e-07!3;CL:0002541!1.49e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002617;1.64e-40;2!CL:0000136;8.17e-25;13!CL:0002616;6.31e-21;1!CL:0000764;3.70e-11;2!CL:0000558;3.70e-11;2!CL:0002615;4.52e-08;3!CL:0002580;5.18e-08;3!CL:0002579;5.73e-08;3!CL:0002541;7.26e-08;3!CL:0002334;1.27e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,2.46e-40,2;CL:0000136,1.42e-21,15;CL:0002616,4.22e-21,1;CL:0000764,4.09e-11,2;CL:0000765,4.09e-11,2;CL:0000050,4.09e-11,2;CL:0000038,4.09e-11,2;CL:0000558,4.09e-11,2;CL:0000547,4.09e-11,2;CL:0000549,4.09e-11,2;CL:0000550,4.09e-11,2;CL:0000552,4.09e-11,2;CL:0002615,4.52e-08,3;CL:0002580,5.18e-08,3;CL:0002579,5.93e-08,3;CL:0002541,6.78e-08,3;CL:0002334,1.29e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000310!2.90e-12!10;UBERON:0007023!4.11e-12!115;UBERON:0001443!4.00e-11!11;UBERON:0003688!3.16e-08!6;UBERON:0002358!3.16e-08!6;UBERON:0003684!3.16e-08!6;UBERON:0001178!3.16e-08!6;UBERON:0000178!3.54e-08!15;UBERON:0000179!3.54e-08!15;UBERON:0000463!3.54e-08!15;UBERON:0000476!1.49e-07!3;UBERON:0000920!1.49e-07!3;UBERON:0003978!2.06e-07!3;UBERON:0009751!2.06e-07!3;UBERON:0000946!2.06e-07!3;UBERON:0002523!2.06e-07!3;UBERON:0005983!2.06e-07!3;UBERON:0002165!2.06e-07!3;UBERON:0002062!2.06e-07!3;UBERON:0007280!2.06e-07!3;UBERON:0003124!7.55e-07!7;UBERON:0004457!7.99e-07!12;UBERON:0000042!7.99e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.36e-18;10!UBERON:0001443;5.70e-17;11!UBERON:0003688;2.25e-14;6!UBERON:0002358;2.25e-14;6!UBERON:0003684;2.25e-14;6!UBERON:0001178;2.25e-14;6!UBERON:0005406;3.70e-11;2!UBERON:0004457;6.63e-10;9!UBERON:0000042;6.63e-10;9!UBERON:0003124;7.26e-08;3!UBERON:0000920;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.53e-18,10;UBERON:0001443,6.36e-17,11;UBERON:0003688,2.33e-14,6;UBERON:0002358,2.33e-14,6;UBERON:0003684,2.33e-14,6;UBERON:0001178,2.33e-14,6;UBERON:0005406,3.02e-11,2;UBERON:0000920,6.78e-08,3;UBERON:0004457,1.20e-07,12;UBERON:0000042,1.20e-07,12 | |||
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|short_description=p1@ENST00000449063 | |||
}} | }} |
Latest revision as of 21:05, 29 July 2015
Short description: | p1@ENST00000449063 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000449063_5end |
Coexpression cluster: | C731_Adipocyte_Preadipocyte_adipose_Wilms_salivary_Mesenchymal_epididymis |
Association with transcript: | -15bp_to_ENST00000449063_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 2.46e-40 | 2 |
fat cell | 1.42e-21 | 15 |
perirenal adipocyte cell | 4.22e-21 | 1 |
erythroid lineage cell | 4.09e-11 | 2 |
erythroblast | 4.09e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 4.09e-11 | 2 |
erythroid progenitor cell | 4.09e-11 | 2 |
reticulocyte | 4.09e-11 | 2 |
proerythroblast | 4.09e-11 | 2 |
basophilic erythroblast | 4.09e-11 | 2 |
polychromatophilic erythroblast | 4.09e-11 | 2 |
orthochromatic erythroblast | 4.09e-11 | 2 |
adipocyte of omentum tissue | 4.52e-08 | 3 |
preadipocyte of the breast | 5.18e-08 | 3 |
omentum preadipocyte | 5.93e-08 | 3 |
chorionic membrane mesenchymal stem cell | 6.78e-08 | 3 |
preadipocyte | 1.29e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
breast | 1.53e-18 | 10 |
chest | 6.36e-17 | 11 |
omentum | 2.33e-14 | 6 |
peritoneum | 2.33e-14 | 6 |
abdominal cavity | 2.33e-14 | 6 |
visceral peritoneum | 2.33e-14 | 6 |
perirenal fat | 3.02e-11 | 2 |
egg chorion | 6.78e-08 | 3 |
cavity lining | 1.20e-07 | 12 |
serous membrane | 1.20e-07 | 12 |