FFCP PHASE1:Hg19::chr4:163037784..163037795,+: Difference between revisions
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|id=chr4:163037784..163037795,+
|short_description=p@chr4:163037784..163037795,+
|description=CAGE_peak_at_chr4:163037784..163037795,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:163037784..163037795,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr4:163037784..163037795,+ | |||
|id=chr4:163037784..163037795,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.98e-13!5;CL:0000047!8.79e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,6.76e-18,11 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.39e-45!32;UBERON:0002791!3.68e-44!33;UBERON:0002020!8.06e-43!34;UBERON:0003528!8.06e-43!34;UBERON:0001893!8.06e-43!34;UBERON:0002780!3.21e-35!41;UBERON:0001890!3.21e-35!41;UBERON:0006240!3.21e-35!41;UBERON:0003080!2.46e-34!42;UBERON:0005743!4.81e-32!86;UBERON:0001017!2.19e-30!82;UBERON:0003056!6.04e-30!61;UBERON:0002619!3.15e-29!22;UBERON:0000369!5.98e-29!4;UBERON:0002435!5.98e-29!4;UBERON:0000204!5.98e-29!4;UBERON:0010082!5.98e-29!4;UBERON:0000073!1.03e-28!94;UBERON:0001016!1.03e-28!94;UBERON:0002420!2.03e-28!9;UBERON:0007245!2.03e-28!9;UBERON:0010009!2.03e-28!9;UBERON:0010011!2.03e-28!9;UBERON:0000454!2.03e-28!9;UBERON:0001950!4.63e-26!20;UBERON:0000955!7.78e-26!69;UBERON:0006238!7.78e-26!69;UBERON:0000956!1.14e-25!25;UBERON:0000203!1.14e-25!25;UBERON:0009663!1.85e-25!7;UBERON:0001049!9.98e-25!57;UBERON:0005068!9.98e-25!57;UBERON:0006241!9.98e-25!57;UBERON:0007135!9.98e-25!57;UBERON:0002616!8.28e-24!59;UBERON:0005383!2.43e-22!3;UBERON:0005382!2.43e-22!3;UBERON:0003075!2.07e-20!86;UBERON:0007284!2.07e-20!86;UBERON:0002308!8.74e-20!9;UBERON:0000125!8.74e-20!9;UBERON:0002346!2.27e-19!90;UBERON:0001873!1.80e-15!2;UBERON:0010122!1.80e-15!2;UBERON:0000033!4.29e-15!123;UBERON:0004121!1.75e-14!169;UBERON:0000153!3.04e-14!129;UBERON:0007811!3.04e-14!129;UBERON:0000924!4.60e-14!173;UBERON:0006601!4.60e-14!173;UBERON:0000349!1.38e-13!5;UBERON:0002021!1.44e-13!5;UBERON:0007023!8.87e-13!115;UBERON:0000200!3.53e-11!6;UBERON:0002771!2.16e-10!3;UBERON:0001871!1.09e-08!7;UBERON:0001874!1.27e-08!1;UBERON:0002581!2.13e-08!1;UBERON:0001882!2.29e-08!1;UBERON:0005403!2.29e-08!1;UBERON:0002022!2.84e-08!1;UBERON:0002902!4.07e-08!1;UBERON:0009899!4.07e-08!1;UBERON:0000064!4.46e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:163037784..163037795,+ | |||
}} | }} |
Latest revision as of 02:56, 30 July 2015
Short description: | p@chr4:163037784..163037795, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:163037784..163037795, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.76e-18 | 11 |