FFCP PHASE1:Hg19::chr4:166604070..166604073,+: Difference between revisions
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|id=chr4:166604070..166604073,+
|short_description=p@chr4:166604070..166604073,+
|description=CAGE_peak_at_chr4:166604070..166604073,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:166604070..166604073,+ | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_at_chr4:166604070..166604073,+ | |||
|id=chr4:166604070..166604073,+ | |||
|ontology_enrichment_celltype=CL:0002166!1.81e-54!3;CL:0002159!1.27e-22!13;CL:0000319!1.56e-19!1;CL:0000317!1.72e-10!2;CL:1000448!1.72e-10!2;CL:0002308!1.72e-10!2;CL:0002140!1.72e-10!2;CL:0000159!1.89e-10!2;CL:0002077!3.89e-09!33;CL:0002621!2.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002166;5.96e-34;3!CL:0002368;5.28e-09;13!CL:0002159;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,5.96e-34,3;CL:0002368,5.28e-09,13;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!1.56e-19!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!4.37e-41!4;UBERON:0001704!4.37e-41!4;UBERON:0002090!1.12e-27!6;UBERON:0001282!3.91e-19!1;UBERON:0009842!3.91e-19!1;UBERON:0003704!3.91e-19!1;UBERON:0001171!3.91e-19!1;UBERON:0001172!3.91e-19!1;UBERON:0003129!1.94e-15!11;UBERON:0000075!3.63e-13!13;UBERON:0005944!3.63e-13!13;UBERON:0004288!3.63e-13!13;UBERON:0003089!3.63e-13!13;UBERON:0002419!1.72e-10!2;UBERON:0007771!1.72e-10!2;UBERON:0003297!1.72e-10!2;UBERON:0001821!1.72e-10!2;UBERON:0003487!1.72e-10!2;UBERON:0001820!1.72e-10!2;UBERON:0005089!1.72e-10!2;UBERON:0005088!1.72e-10!2;UBERON:0001949!2.32e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.14e-26;4!UBERON:0008895;7.14e-26;4!UBERON:0011159;5.15e-21;5!UBERON:0011137;2.37e-10;11!UBERON:0010323;2.37e-10;11!UBERON:0000075;1.54e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,7.14e-26,4;UBERON:0008895,7.14e-26,4;UBERON:0011159,5.15e-21,5;UBERON:0010188,9.07e-18,6;UBERON:0002539,9.07e-18,6;UBERON:0008816,9.07e-18,6;UBERON:0010323,2.37e-10,11;UBERON:0011137,2.00e-08,14;UBERON:0000075,1.54e-07,16;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p@chr4:166604070..166604073,+ | |||
}} | }} |
Latest revision as of 03:04, 30 July 2015
Short description: | p@chr4:166604070..166604073, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:166604070..166604073, + |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 5.96e-34 | 3 |
respiratory epithelial cell | 5.28e-09 | 13 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 7.14e-26 | 4 |
splanchnocranium | 7.14e-26 | 4 |
primary subdivision of cranial skeletal system | 5.15e-21 | 5 |
protuberance | 9.07e-18 | 6 |
pharyngeal arch | 9.07e-18 | 6 |
embryonic head | 9.07e-18 | 6 |
cranial skeletal system | 2.37e-10 | 11 |
axial skeletal system | 2.00e-08 | 14 |
subdivision of skeletal system | 1.54e-07 | 16 |
pharyngeal arch system | 7.60e-07 | 18 |