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FFCP PHASE1:Hg19::chr4:8873545..8873583,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=3166
|EntrezGene=3166
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=5017
|HGNC=5017
|TSSclassifier=strong
|UniProt=Q9NP08
|UniProt=Q9NP08
|association_with_transcript=-2bp_to_ENST00000400677,NM_018942,uc003izz.1_5end
|association_with_transcript=-2bp_to_ENST00000400677,NM_018942,uc003izz.1_5end
|cluster_id=chr4:8873545..8873583,-
|coexpression_cluster_id=C369
|coexpression_cluster_id=C369
|description=CAGE_peak_1_at_HMX1_5end
|description=CAGE_peak_1_at_HMX1_5end

Latest revision as of 06:18, 19 September 2015

Short description:p1@HMX1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_HMX1_5end
Coexpression cluster:C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal
Association with transcript: -2bp_to_ENST00000400677, NM_018942, uc003izz.1_5end
EntrezGene:HMX1
HGNC: 5017
UniProt: Q9NP08
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data