FFCP PHASE1:Hg19::chr4:8582132..8582151,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:8582132..8582151,+
|short_description=p3@GPR78
|description=CAGE_peak_3_at_GPR78_5end
|association_with_transcript=-65bp_to_NM_080819_5end
|EntrezGene=272...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27201 | |EntrezGene=27201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4528 | |HGNC=4528 | ||
|TSSclassifier=strong | |||
|UniProt=B2R7M4,Q96P69 | |UniProt=B2R7M4,Q96P69 | ||
|association_with_transcript=-65bp_to_NM_080819_5end | |||
|cluster_id=chr4:8582132..8582151,+ | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_3_at_GPR78_5end | |||
|id=chr4:8582132..8582151,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.33e-20!7;CL:0000586!3.33e-20!7;CL:0002322!2.16e-17!5;CL:0002541!4.84e-17!3;CL:0000540!8.36e-09!6;CL:0000031!8.36e-09!6;CL:0000404!8.36e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.59e-32;7!CL:0000586;1.59e-32;7!CL:0000083;1.54e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.67e-32,7;CL:0000586,1.67e-32,7;CL:0000083,1.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.06e-26;1 | |||
|ontology_enrichment_disease=DOID:3095!1.22e-08!22;DOID:2994!1.22e-08!22;DOID:1799!3.52e-07!1;DOID:10165!3.52e-07!1;DOID:1798!3.52e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;4.06e-26;1!DOID:10165;4.06e-26;1!DOID:1798;4.06e-26;1!DOID:3095;7.04e-11;22!DOID:2994;7.04e-11;22!DOID:1793;1.54e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.61e-26,1;DOID:10165,4.61e-26,1;DOID:1798,4.61e-26,1;DOID:3095,7.16e-11,22;DOID:2994,7.16e-11,22;DOID:1793,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.84e-17!3;UBERON:0000920!4.84e-17!3;UBERON:0003124!6.14e-13!7;UBERON:0001950!1.04e-11!20;UBERON:0001869!1.09e-11!32;UBERON:0001893!6.16e-11!34;UBERON:0002619!1.30e-10!22;UBERON:0005631!8.65e-10!14;UBERON:0000158!8.65e-10!14;UBERON:0000956!2.75e-09!25;UBERON:0000203!2.75e-09!25;UBERON:0002791!5.96e-09!33;UBERON:0002780!7.20e-09!41;UBERON:0001890!7.20e-09!41;UBERON:0006240!7.20e-09!41;UBERON:0002020!1.16e-08!34;UBERON:0003528!1.16e-08!34;UBERON:0003080!1.25e-08!42;UBERON:0002022!4.97e-07!1;UBERON:0001017!6.75e-07!82;UBERON:0001882!9.79e-07!1;UBERON:0005403!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4 | |||
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|short_description=p3@GPR78 | |||
}} | }} |
Latest revision as of 03:06, 19 September 2015
Short description: | p3@GPR78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR78_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -65bp_to_NM_080819_5end |
EntrezGene: | GPR78 |
HGNC: | 4528 |
UniProt: | B2R7M4Q96P69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.67e-32 | 7 |
germ cell | 1.67e-32 | 7 |
epithelial cell of pancreas | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.61e-26 | 1 |
endocrine pancreas cancer | 4.61e-26 | 1 |
pancreatic endocrine carcinoma | 4.61e-26 | 1 |
germ cell and embryonal cancer | 7.16e-11 | 22 |
germ cell cancer | 7.16e-11 | 22 |
pancreatic cancer | 1.59e-07 | 4 |