FFCP PHASE1:Hg19::chr5:102201509..102201528,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:102201509..102201528,+
|short_description=p8@PAM
|description=CAGE_peak_8_at_PAM_5end
|association_with_transcript=0bp_to_ENST00000345721,ENST00000348126,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5066 | |EntrezGene=5066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |HGNC=8596 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8D9,A6NMH0,P19021 | |UniProt=F8W8D9,A6NMH0,P19021 | ||
|association_with_transcript=0bp_to_ENST00000345721,ENST00000348126,ENST00000379787,ENST00000513648,NM_000919,NM_001177306,NM_138766,NM_138821,NM_138822,NR_033440,uc003kns.2,uc003knt.2,uc003knu.2,uc003knv.2,uc003knw.2,uc011cuz.1_5end | |||
|cluster_id=chr5:102201509..102201528,+ | |||
|description=CAGE_peak_8_at_PAM_5end | |||
|id=chr5:102201509..102201528,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.63e-14!180;CL:0000057!3.42e-14!75;CL:0002620!5.71e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.73e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.58e-13,76;CL:0002620,7.26e-10,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.19e-11!365;UBERON:0007023!1.61e-11!115;UBERON:0001017!1.38e-09!82;UBERON:0005743!1.54e-09!86;UBERON:0002616!1.07e-08!59;UBERON:0003075!2.45e-08!86;UBERON:0007284!2.45e-08!86;UBERON:0000468!2.56e-08!659;UBERON:0000033!2.69e-08!123;UBERON:0000073!3.83e-08!94;UBERON:0001016!3.83e-08!94;UBERON:0000955!5.14e-08!69;UBERON:0006238!5.14e-08!69;UBERON:0000153!7.29e-08!129;UBERON:0007811!7.29e-08!129;UBERON:0000481!1.60e-07!347;UBERON:0001049!1.86e-07!57;UBERON:0005068!1.86e-07!57;UBERON:0006241!1.86e-07!57;UBERON:0007135!1.86e-07!57;UBERON:0003080!2.79e-07!42;UBERON:0002780!3.25e-07!41;UBERON:0001890!3.25e-07!41;UBERON:0006240!3.25e-07!41;UBERON:0003056!4.67e-07!61;UBERON:0000477!5.54e-07!286;UBERON:0004121!5.55e-07!169;UBERON:0002346!6.12e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.89e-08,114 | |||
|phase1_expression=5.08699461957559,2.99740733447376,4.08767771878316,0,1.34088328328186,0.872338524100369,0,3.15859936713415,0.522371256399677,0.245733936501509,0,0,0.263766978228454,1.73272894144065,0.662794751455832,3.36162573225888,1.80808358407193,2.19093027116212,1.46379839637152,1.23121058076788,1.02000345622126,0.626909442956176,0.572471974262113,1.23186982565596,0.87879847716362,0,0,0.0787107813136792,0,0.383829398097213,0.77408061658038,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,1.06976078313403,0.289648807765598,0,0.670700859703636,0.639312809217652,0.361439152384566,0,2.02785126545153,0.795285947051099,0.486634870302636,2.17430079477356,1.10864698731282,1.40535657109002,1.5062593682237,0,0,0.324547393654683,0.696518949197069,0.664789802594326,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0,0.417989933073621,0.775250277507987,1.06729878806013,1.67360306382335,0,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.535798369704479,0.22452937262617,0.563057402416611,3.06633274931766,0,0.183201743930407,0,0,0.436094052142534,2.48485975847659,0.379891534993739,1.45650098894541,2.29469296599051,0.709336764396714,1.12135520028461,0,0.98667019366864,1.24484414159907,1.0776853765575,0.653847612453835,2.8757911252537,6.91411109375999,0.468642863667593,0.312160076830321,0,1.49448680551801,1.40921398372518,1.78060238804945,1.54495887372473,1.63323337003915,0.368502951935304,1.75653827998801,0,1.7308685049499,0.910161361938026,0.718618141816238,1.0100166837244,1.25118519871964,0.554128230968366,1.75591048352335,1.5324389789951,2.40380894250555,0.113432183160021,3.04962380671065,3.41691822109708,1.27159140695737,1.50045548042201,2.06105058476878,2.57640540045629,4.28068769562657,1.85653965465393,1.46155507741798,1.51460264546469,6.25939310767636,12.6083924318673,3.90510551768276,2.11579406278045,0.508681776931463,0.57978255948989,0,0,1.21973706129595,1.45782745153634,1.2781333715647,1.96956004529204,0.504641701751257,0.36497735907583,0,2.57296375277154,0,0.928735856063958,1.44375896333917,0.591534000199219,0.168584690078102,0.241011029883482,0.110293972732394,0,0.71181185733329,0.808987848960987,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,1.03993478527958,0,1.85488647960123,0.70445216541493,0.577465791044295,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0.088048434013226,0.621984346622316,0,0.25248486685276,0.126995788584338,0.381988425558278,1.17217447210047,0,0.411309970813294,0,0.285826432630578,1.23344192779897,1.30788020649984,2.3468251462704,2.06834745212444,3.57656445851882,1.690605505112,3.45719551560332,1.04007436911366,0.257207374262142,0,0.266422179016099,1.28680194292333,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,1.74306691720059,0.599837947092342,0,0,0,0,1.14861935834114,4.27910715122155,0.579125226670317,1.43833425785268,1.25342674267927,0,0.788123040807709,1.2937654491571,0.385029108839245,1.01637849688985,1.30139853857622,0,1.17261385734044,0.637938751653163,0,0,0,1.47229790062968,2.00068208423871,0.542530047399471,0.623912584592421,1.96271887676878,1.41932173530541,0.468565659970853,1.20378439891088,4.5481500811197,1.03473071292505,1.32845119707087,0.553107505625109,3.30157734978715,0.195801157462741,0.686286847621712,0,0.647142602455851,0.426910231213777,0,0,0.30239029332968,2.97729369382532,3.52962538562544,2.52594084989766,4.48487022394953,2.04682899626681,2.0911009748669,1.48418066444991,0.925258162815933,1.9531789784444,1.23190734020714,0,0.813472649219715,0.120859449591622,0.200506470303285,0.552485933615378,0.918515585316854,0.728364672026868,0.786746489756545,0,0.231046011313244,1.56869953835371,0,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.206082023295445,0.0915694648183434,0.330037999682352,0,0,0,1.64340221096607,1.07834031980251,1.5350367472613,0.964856007391714,3.33002759091648,1.45016693914229,1.36362603865761,1.33548053470106,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0.869932992075073,0.74129687641568,0.143124886741991,2.97726695487734,0.316379424718726,1.5250415513906,0,0.855877976067841,0.95460974377781,0,1.43897966066652,1.64722217841633,1.17812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0.682499557039929,1.1312434556297,0,0.551365343546124,0.66343897524122,0,0,1.31178950409327,0.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|phase1_expression=5.08699461957559,2.99740733447376,4.08767771878316,0,1.34088328328186,0.872338524100369,0,3.15859936713415,0.522371256399677,0.245733936501509,0,0,0.263766978228454,1.73272894144065,0.662794751455832,3.36162573225888,1.80808358407193,2.19093027116212,1.46379839637152,1.23121058076788,1.02000345622126,0.626909442956176,0.572471974262113,1.23186982565596,0.87879847716362,0,0,0.0787107813136792,0,0.383829398097213,0.77408061658038,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,1.06976078313403,0.289648807765598,0,0.670700859703636,0.639312809217652,0.361439152384566,0,2.02785126545153,0.795285947051099,0.486634870302636,2.17430079477356,1.10864698731282,1.40535657109002,1.5062593682237,0,0,0.324547393654683,0.696518949197069,0.664789802594326,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0,0.417989933073621,0.775250277507987,1.06729878806013,1.67360306382335,0,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.535798369704479,0.22452937262617,0.563057402416611,3.06633274931766,0,0.183201743930407,0,0,0.436094052142534,2.48485975847659,0.379891534993739,1.45650098894541,2.29469296599051,0.709336764396714,1.12135520028461,0,0.98667019366864,1.24484414159907,1.0776853765575,0.653847612453835,2.8757911252537,6.91411109375999,0.468642863667593,0.312160076830321,0,1.49448680551801,1.40921398372518,1.78060238804945,1.54495887372473,1.63323337003915,0.368502951935304,1.75653827998801,0,1.7308685049499,0.910161361938026,0.718618141816238,1.0100166837244,1.25118519871964,0.554128230968366,1.75591048352335,1.5324389789951,2.40380894250555,0.113432183160021,3.04962380671065,3.41691822109708,1.27159140695737,1.50045548042201,2.06105058476878,2.57640540045629,4.28068769562657,1.85653965465393,1.46155507741798,1.51460264546469,6.25939310767636,12.6083924318673,3.90510551768276,2.11579406278045,0.508681776931463,0.57978255948989,0,0,1.21973706129595,1.45782745153634,1.2781333715647,1.96956004529204,0.504641701751257,0.36497735907583,0,2.57296375277154,0,0.928735856063958,1.44375896333917,0.591534000199219,0.168584690078102,0.241011029883482,0.110293972732394,0,0.71181185733329,0.808987848960987,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,1.03993478527958,0,1.85488647960123,0.70445216541493,0.577465791044295,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0.088048434013226,0.621984346622316,0,0.25248486685276,0.126995788584338,0.381988425558278,1.17217447210047,0,0.411309970813294,0,0.285826432630578,1.23344192779897,1.30788020649984,2.3468251462704,2.06834745212444,3.57656445851882,1.690605505112,3.45719551560332,1.04007436911366,0.257207374262142,0,0.266422179016099,1.28680194292333,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,1.74306691720059,0.599837947092342,0,0,0,0,1.14861935834114,4.27910715122155,0.579125226670317,1.43833425785268,1.25342674267927,0,0.788123040807709,1.2937654491571,0.385029108839245,1.01637849688985,1.30139853857622,0,1.17261385734044,0.637938751653163,0,0,0,1.47229790062968,2.00068208423871,0.542530047399471,0.623912584592421,1.96271887676878,1.41932173530541,0.468565659970853,1.20378439891088,4.5481500811197,1.03473071292505,1.32845119707087,0.553107505625109,3.30157734978715,0.195801157462741,0.686286847621712,0,0.647142602455851,0.426910231213777,0,0,0.30239029332968,2.97729369382532,3.52962538562544,2.52594084989766,4.48487022394953,2.04682899626681,2.0911009748669,1.48418066444991,0.925258162815933,1.9531789784444,1.23190734020714,0,0.813472649219715,0.120859449591622,0.200506470303285,0.552485933615378,0.918515585316854,0.728364672026868,0.786746489756545,0,0.231046011313244,1.56869953835371,0,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.206082023295445,0.0915694648183434,0.330037999682352,0,0,0,1.64340221096607,1.07834031980251,1.5350367472613,0.964856007391714,3.33002759091648,1.45016693914229,1.36362603865761,1.33548053470106,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0.869932992075073,0.74129687641568,0.143124886741991,2.97726695487734,0.316379424718726,1.5250415513906,0,0.855877976067841,0.95460974377781,0,1.43897966066652,1.64722217841633,1.17812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0.682499557039929,1.1312434556297,0,0.551365343546124,0.66343897524122,0,0,1.31178950409327,0.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| ||
|short_description=p8@PAM | |||
}} | }} |
Latest revision as of 12:58, 19 September 2015
Short description: | p8@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000345721, ENST00000348126, ENST00000379787, ENST00000513648, NM_000919, NM_001177306, NM_138766, NM_138821, NM_138822, NR_033440, uc003kns.2, uc003knt.2, uc003knu.2, uc003knv.2, uc003knw.2, uc011cuz.1_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | F8W8D9A6NMH0P19021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.58e-13 | 76 |
skin fibroblast | 7.26e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.89e-08 | 114 |