FFCP PHASE1:Hg19::chr7:139478030..139478092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6916 | |EntrezGene=6916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11609 | |HGNC=11609 | ||
|TSSclassifier=strong | |||
|UniProt=P24557,E7ESB5,Q53F23,Q96CN2 | |UniProt=P24557,E7ESB5,Q53F23,Q96CN2 | ||
|association_with_transcript=0bp_to_ENST00000263552,ENST00000425687,ENST00000474763,ENST00000481440,NM_001130966,NM_001166254_5end | |association_with_transcript=0bp_to_ENST00000263552,ENST00000425687,ENST00000474763,ENST00000481440,NM_001130966,NM_001166254_5end | ||
|cluster_id=chr7:139478030..139478092,+ | |||
|description=CAGE_peak_4_at_TBXAS1_5end | |description=CAGE_peak_4_at_TBXAS1_5end | ||
|id=chr7:139478030..139478092,+ | |id=chr7:139478030..139478092,+ |
Latest revision as of 16:57, 16 September 2015
Short description: | p4@TBXAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TBXAS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263552, ENST00000425687, ENST00000474763, ENST00000481440, NM_001130966, NM_001166254_5end |
EntrezGene: | TBXAS1 |
HGNC: | 11609 |
UniProt: | P24557E7ESB5Q53F23Q96CN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@TBXAS1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 5.07e-12 | 17 |
kidney epithelial cell | 5.07e-12 | 17 |
epithelial cell of nephron | 2.61e-10 | 15 |
kidney tubule cell | 5.81e-10 | 10 |
nephron tubule epithelial cell | 5.81e-10 | 10 |
fibroblast | 3.51e-08 | 76 |
kidney cortical cell | 1.90e-07 | 12 |
renal cortical epithelial cell | 1.90e-07 | 12 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.48e-14 | 160 |
entire embryonic mesenchyme | 2.48e-14 | 160 |
nephron epithelium | 2.61e-10 | 15 |
renal tubule | 2.61e-10 | 15 |
nephron tubule | 2.61e-10 | 15 |
nephron | 2.61e-10 | 15 |
uriniferous tubule | 2.61e-10 | 15 |
nephrogenic mesenchyme | 2.61e-10 | 15 |
nephron tubule epithelium | 5.81e-10 | 10 |
excretory tube | 2.27e-09 | 16 |
Showing 1 to 10 of 26 entries