FFCP PHASE1:Hg19::chr5:137804357..137804390,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:137804357..137804390,+
|short_description=p4@EGR1
|description=CAGE_peak_4_at_EGR1_5end
|association_with_transcript=-100bp_to_M24019_5end
|EntrezGene=195...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1958 | |EntrezGene=1958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3238 | |HGNC=3238 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_M24019_5end | |||
|cluster_id=chr5:137804357..137804390,+ | |||
|description=CAGE_peak_4_at_EGR1_5end | |||
|id=chr5:137804357..137804390,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.97e-14!143;DOID:14566!1.70e-11!239;DOID:162!1.96e-11!235;DOID:305!6.89e-10!106;DOID:0050686!6.64e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.30e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.15e-13,143;DOID:305,1.25e-11,106;DOID:162,6.16e-11,235;DOID:14566,9.67e-11,239;DOID:1749,4.68e-10,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@EGR1 | |||
}} | }} |
Latest revision as of 23:00, 24 September 2015
Short description: | p4@EGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EGR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_M24019_5end |
EntrezGene: | EGR1 |
HGNC: | 3238 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.15e-13 | 143 |
carcinoma | 1.25e-11 | 106 |
cancer | 6.16e-11 | 235 |
disease of cellular proliferation | 9.67e-11 | 239 |
squamous cell carcinoma | 4.68e-10 | 14 |