FFCP PHASE1:Hg19::chr5:172332357..172332371,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:172332357..172332371,+
|short_description=p23@ERGIC1
|description=CAGE_peak_23_at_ERGIC1_5end
|association_with_transcript=114bp_to_ENST00000326654,uc003mb...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57222 | |EntrezGene=57222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29205 | |HGNC=29205 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=114bp_to_ENST00000326654,uc003mbz.3_5end | |||
|cluster_id=chr5:172332357..172332371,+ | |||
|description=CAGE_peak_23_at_ERGIC1_5end | |||
|id=chr5:172332357..172332371,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.48e-11!254;CL:0002595!1.48e-08!5;CL:0002076!8.65e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000159;9.82e-18;2!CL:0002541;1.59e-11;3!CL:0000313;9.03e-10;1!CL:0000319;1.07e-09;1!CL:0000359;2.40e-08;32!CL:0000622;2.94e-07;5!CL:0002595;2.94e-07;5!CL:0000077;5.25e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,1.07e-17,2;CL:0002541,7.92e-12,3;CL:0000313,9.44e-10,1;CL:0000319,1.12e-09,1;CL:0000359,1.65e-08,32;CL:0000622,2.94e-07,5;CL:0002595,3.67e-07,5;CL:0000077,5.69e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.88e-09;1 | |||
|ontology_enrichment_disease=DOID:2394!9.52e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;9.03e-10;1!DOID:3030;1.07e-09;1!DOID:3111;2.88e-09;1!DOID:3603;2.88e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.44e-10,1;DOID:3030,1.12e-09,1;DOID:3111,1.69e-09,1;DOID:3603,1.69e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003834!1.48e-08!5;UBERON:0001533!1.48e-08!5;UBERON:0000065!6.61e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.59e-11;3!UBERON:0000920;1.59e-11;3!UBERON:0004911;9.03e-10;1!UBERON:0004573;2.15e-07;33!UBERON:0004571;2.15e-07;33!UBERON:0003834;2.94e-07;5!UBERON:0001533;2.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.92e-12,3;UBERON:0003124,7.71e-11,7;UBERON:0004911,9.44e-10,1;UBERON:0004573,3.09e-08,33;UBERON:0004571,3.09e-08,33;UBERON:0003834,3.67e-07,5;UBERON:0001533,3.67e-07,5 | |||
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| ||
|short_description=p23@ERGIC1 | |||
}} | }} |
Latest revision as of 01:06, 17 September 2015
Short description: | p23@ERGIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ERGIC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 114bp_to_ENST00000326654, uc003mbz.3_5end |
EntrezGene: | ERGIC1 |
HGNC: | 29205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 1.07e-17 | 2 |
chorionic membrane mesenchymal stem cell | 7.92e-12 | 3 |
serous secreting cell | 9.44e-10 | 1 |
mucus secreting cell | 1.12e-09 | 1 |
vascular associated smooth muscle cell | 1.65e-08 | 32 |
acinar cell | 2.94e-07 | 5 |
smooth muscle cell of the subclavian artery | 3.67e-07 | 5 |
mesothelial cell | 5.69e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.92e-12 | 3 |
chorion | 7.71e-11 | 7 |
epithelium of female gonad | 9.44e-10 | 1 |
systemic artery | 3.09e-08 | 33 |
systemic arterial system | 3.09e-08 | 33 |
thoracic segment blood vessel | 3.67e-07 | 5 |
subclavian artery | 3.67e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.44e-10 | 1 |
mucinous adenocarcinoma | 1.12e-09 | 1 |
cystadenocarcinoma | 1.69e-09 | 1 |
mucinous cystadenocarcinoma | 1.69e-09 | 1 |