FFCP PHASE1:Hg19::chr5:177310472..177310481,+: Difference between revisions
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|id=chr5:177310472..177310481,+
|short_description=p@chr5:177310472..177310481,+
|description=CAGE_peak_at_chr5:177310472..177310481,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:177310472..177310481,+ | |||
|description=CAGE_peak_at_chr5:177310472..177310481,+ | |||
|id=chr5:177310472..177310481,+ | |||
|ontology_enrichment_celltype=CL:0002231!1.81e-08!3;CL:0000313!2.10e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.59e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.89e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.11e-27;5!UBERON:0007297;9.07e-18;2 | |||
|ontology_enrichment_disease=DOID:1749!2.01e-19!14;DOID:2152!2.10e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.23e-18!3;UBERON:0004054!1.23e-18!3;UBERON:0005904!4.12e-14!4;UBERON:0000341!5.29e-13!2;UBERON:0003127!1.81e-12!2;UBERON:0005156!9.69e-10!59;UBERON:0000990!9.69e-10!59;UBERON:0000974!1.29e-09!10;UBERON:0000002!4.15e-09!6;UBERON:0001560!4.15e-09!6;UBERON:0003101!6.42e-09!22;UBERON:0000079!6.42e-09!22;UBERON:0003126!5.37e-08!7;UBERON:0001005!5.37e-08!7;UBERON:0004175!7.12e-08!25;UBERON:0003937!9.85e-08!12;UBERON:0005399!9.85e-08!12;UBERON:0001301!1.55e-07!1;UBERON:0001004!1.57e-07!72;UBERON:0004911!2.10e-07!1;UBERON:0000998!2.37e-07!1;UBERON:0006868!2.37e-07!1;UBERON:0001000!3.82e-07!1;UBERON:0005352!3.82e-07!1;UBERON:0000997!4.06e-07!1;UBERON:0005056!4.06e-07!1;UBERON:0000161!4.58e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.05e-34;1!UBERON:0002046;3.11e-27;5!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0003343;1.44e-09;4!UBERON:0005904;1.44e-09;4!UBERON:0001708;1.44e-09;4!UBERON:0004785;1.44e-09;4!UBERON:0008895;1.44e-09;4!UBERON:0011159;6.55e-08;5!UBERON:0000974;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.58e-34,1;UBERON:0002046,3.55e-27,5;UBERON:0004117,3.55e-27,5;UBERON:0007689,3.55e-27,5;UBERON:0007123,3.55e-27,5;UBERON:0003091,3.55e-27,5;UBERON:0008814,3.69e-17,18;UBERON:0009722,5.76e-13,11;UBERON:0007690,5.76e-13,11;UBERON:0006947,2.07e-12,3;UBERON:0004054,2.07e-12,3;UBERON:0005904,1.22e-09,4;UBERON:0003343,1.44e-09,4;UBERON:0004785,1.44e-09,4;UBERON:0001708,1.57e-09,4;UBERON:0008895,1.57e-09,4;UBERON:0011159,7.01e-08,5;UBERON:0010188,8.97e-07,6;UBERON:0002539,8.97e-07,6;UBERON:0008816,8.97e-07,6 | |||
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|short_description=p@chr5:177310472..177310481,+ | |||
}} | }} |
Latest revision as of 13:42, 30 July 2015
Short description: | p@chr5:177310472..177310481, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:177310472..177310481, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.58e-34 | 1 |
thyroid gland | 3.55e-27 | 5 |
pharyngeal pouch | 3.55e-27 | 5 |
thyroid diverticulum | 3.55e-27 | 5 |
pharyngeal pouch 2 | 3.55e-27 | 5 |
thyroid primordium | 3.55e-27 | 5 |
pharyngeal arch system | 3.69e-17 | 18 |
entire pharyngeal arch endoderm | 5.76e-13 | 11 |
early pharyngeal endoderm | 5.76e-13 | 11 |
male genital duct | 2.07e-12 | 3 |
internal male genitalia | 2.07e-12 | 3 |
duct of male reproductive system | 1.22e-09 | 4 |
mucosa of oral region | 1.44e-09 | 4 |
respiratory system mucosa | 1.44e-09 | 4 |
jaw skeleton | 1.57e-09 | 4 |
splanchnocranium | 1.57e-09 | 4 |
primary subdivision of cranial skeletal system | 7.01e-08 | 5 |
protuberance | 8.97e-07 | 6 |
pharyngeal arch | 8.97e-07 | 6 |
embryonic head | 8.97e-07 | 6 |