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{{MCL_coexpression_mm9
{
|coexpression_dpi_cluster_scores_mean=-0.

Latest revision as of 14:33, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:42252949..42252972,+p@chr10:42252949..42252972
+
Mm9::chr10:59740450..59740467,+p1@Psap
Mm9::chr10:59754421..59754435,+p@chr10:59754421..59754435
+
Mm9::chr10:59754471..59754484,+p@chr10:59754471..59754484
+
Mm9::chr10:59755248..59755262,+p@chr10:59755248..59755262
+
Mm9::chr10:59756092..59756107,+p@chr10:59756092..59756107
+
Mm9::chr10:59756164..59756188,+p@chr10:59756164..59756188
+
Mm9::chr10:59757273..59757282,+p@chr10:59757273..59757282
+
Mm9::chr10:59757284..59757313,+p@chr10:59757284..59757313
+
Mm9::chr10:59757382..59757459,+p@chr10:59757382..59757459
+
Mm9::chr10:59757707..59757734,+p@chr10:59757707..59757734
+
Mm9::chr10:59757814..59757829,+p@chr10:59757814..59757829
+
Mm9::chr10:59762538..59762575,+p@chr10:59762538..59762575
+
Mm9::chr10:59762597..59762623,+p@chr10:59762597..59762623
+
Mm9::chr10:59762729..59762769,+p@chr10:59762729..59762769
+
Mm9::chr10:59764553..59764576,+p@chr10:59764553..59764576
+
Mm9::chr10:59764666..59764687,+p@chr10:59764666..59764687
+
Mm9::chr10:59764790..59764803,+p@chr10:59764790..59764803
+
Mm9::chr10:59765013..59765027,+p@chr10:59765013..59765027
+
Mm9::chr10:79538105..79538122,-p4@Sbno2
Mm9::chr10:80260664..80260695,-p@chr10:80260664..80260695
-
Mm9::chr10:80820248..80820330,+p1@F630110N24Rik
Mm9::chr10:87321561..87321577,+p18@Igf1
Mm9::chr10:93014574..93014575,+p@chr10:93014574..93014575
+
Mm9::chr11:100931395..100931435,+p1@Naglu
Mm9::chr11:101321209..101321237,-p@chr11:101321209..101321237
-
Mm9::chr11:102291777..102291837,+p1@Grn
Mm9::chr11:102294383..102294396,+p5@Grn
Mm9::chr11:102295493..102295504,+p4@Grn
Mm9::chr11:102296659..102296684,+p2@Grn
Mm9::chr11:103265198..103265232,-p@chr11:103265198..103265232
-
Mm9::chr11:114795606..114795613,-p2@Cd300lb
Mm9::chr11:114862901..114862952,-p1@AF251705
Mm9::chr11:114862956..114862959,-p2@AF251705
Mm9::chr11:115048795..115048876,+p1@Tmem104
Mm9::chr11:118254457..118254472,-p@chr11:118254457..118254472
-
Mm9::chr11:118254855..118254870,-p@chr11:118254855..118254870
-
Mm9::chr11:118254981..118255010,-p@chr11:118254981..118255010
-
Mm9::chr11:119216865..119216926,+p1@Slc26a11
Mm9::chr11:120440629..120440646,-p@chr11:120440629..120440646
-
Mm9::chr11:120440685..120440709,-p@chr11:120440685..120440709
-
Mm9::chr11:121563905..121563930,+p4@Metrnl
Mm9::chr11:45642608..45642611,+p1@ENSMUST00000121695
Mm9::chr11:53328816..53328818,+p@chr11:53328816..53328818
+
Mm9::chr11:62389379..62389392,+p4@Trpv2
Mm9::chr11:62389399..62389435,+p3@Trpv2
Mm9::chr11:62389437..62389466,+p1@Trpv2
Mm9::chr11:69478799..69478822,-p@chr11:69478799..69478822
-
Mm9::chr11:69478859..69478867,-p@chr11:69478859..69478867
-
Mm9::chr11:69479077..69479088,-p@chr11:69479077..69479088
-
Mm9::chr11:69479394..69479407,-p@chr11:69479394..69479407
-
Mm9::chr11:69479580..69479651,-p1@Cd68
Mm9::chr11:69479664..69479671,-p2@Cd68
Mm9::chr11:69498777..69498837,-p1@Tnfsf13
Mm9::chr11:69498839..69498850,-p5@Tnfsf13
Mm9::chr11:69805869..69805887,+p@chr11:69805869..69805887
+
Mm9::chr11:69808041..69808058,+p@chr11:69808041..69808058
+
Mm9::chr11:70051807..70051824,-p9@0610010K14Rik
Mm9::chr11:70250157..70250196,+p4@Arrb2
Mm9::chr11:70273003..70273016,-p7@Cxcl16
Mm9::chr11:70273132..70273154,-p5@Cxcl16
Mm9::chr11:70273158..70273207,-p1@Cxcl16
Mm9::chr11:70273251..70273269,-p8@Cxcl16
Mm9::chr11:70273334..70273343,-p9@Cxcl16
Mm9::chr11:70273381..70273421,-p2@Cxcl16
Mm9::chr11:75268158..75268223,-p1@Wdr81
Mm9::chr11:83517555..83517592,+p1@Gm11428
Mm9::chr11:94538718..94538810,-p1@Xylt2
Mm9::chr11:95704540..95704553,+p12@Gngt2
Mm9::chr11:97521610..97521665,-p1@ENSMUST00000175263
Mm9::chr11:97521667..97521715,-p1@ENSMUST00000134427
p1@uc007leh.1
Mm9::chr12:103677868..103677947,-p1@Lgmn
Mm9::chr12:113998863..113998870,+p3@Pld4
Mm9::chr12:113998894..113998928,+p1@Pld4
Mm9::chr12:86113823..86113831,-p3@Npc2
Mm9::chr13:37437207..37437234,+p3@Ly86
Mm9::chr13:55701416..55701496,+p1@B4galt7
Mm9::chr13:99462106..99462140,-p@chr13:99462106..99462140
-
Mm9::chr14:31973747..31973806,-p@chr14:31973747..31973806
-
Mm9::chr14:31973915..31973932,+p@chr14:31973915..31973932
+
Mm9::chr14:47993580..47993598,+p1@Lgals3
Mm9::chr14:47999858..47999869,+p@chr14:47999858..47999869
+
Mm9::chr14:48000021..48000035,+p@chr14:48000021..48000035
+
Mm9::chr14:48000042..48000056,+p@chr14:48000042..48000056
+
Mm9::chr14:48001297..48001310,+p@chr14:48001297..48001310
+
Mm9::chr14:48004295..48004317,+p@chr14:48004295..48004317
+
Mm9::chr14:63741317..63741332,+p2@Ctsb
Mm9::chr14:63752173..63752197,+p@chr14:63752173..63752197
+
Mm9::chr14:63761521..63761548,-p@chr14:63761521..63761548
-
Mm9::chr14:63761553..63761563,-p@chr14:63761553..63761563
-
Mm9::chr15:100467701..100467712,-p9@Smagp
Mm9::chr15:102109926..102109979,+p1@Mfsd5
Mm9::chr15:102109984..102110003,+p3@Mfsd5
Mm9::chr15:103164241..103164267,-p@chr15:103164241..103164267
-
Mm9::chr15:27611328..27611339,-p3@Fam105a
Mm9::chr15:86044716..86044727,-p@chr15:86044716..86044727
-
Mm9::chr16:32144595..32144606,-p@chr16:32144595..32144606
-
Mm9::chr16:4878334..4878352,-p@chr16:4878334..4878352
-
Mm9::chr16:5204074..5204110,-p1@Nagpa
Mm9::chr17:25270330..25270379,+p1@Clcn7
Mm9::chr17:34063362..34063374,+p13@Tapbp
Mm9::chr17:34765131..34765184,-p2@Ppt2
Mm9::chr17:35309553..35309583,-p1@Aif1
Mm9::chr17:35517348..35517380,+p@chr17:35517348..35517380
+
Mm9::chr17:36011879..36011886,+p@chr17:36011879..36011886
+
Mm9::chr17:36248619..36248641,-p1@ENSMUST00000079918
p1@uc008cke.1
Mm9::chr17:46777031..46777067,-p@chr17:46777031..46777067
-
Mm9::chr17:46889103..46889116,-p3@Cnpy3
Mm9::chr17:46889119..46889180,-p1@Cnpy3
Mm9::chr17:48485731..48485742,+p4@Trem2
Mm9::chr17:48485758..48485770,+p3@Trem2
Mm9::chr17:48485790..48485818,+p1@Trem2
Mm9::chr17:48485823..48485851,+p2@Trem2
Mm9::chr18:32591623..32591671,+p@chr18:32591623..32591671
+
Mm9::chr18:61269470..61269493,-p@chr18:61269470..61269493
-
Mm9::chr18:83658223..83658228,-p@chr18:83658223..83658228
-
Mm9::chr19:10057184..10057201,+p1@Fth1
Mm9::chr19:10057381..10057430,-p@chr19:10057381..10057430
-
Mm9::chr19:10058668..10058709,+p@chr19:10058668..10058709
+
Mm9::chr19:10058737..10058782,+p@chr19:10058737..10058782
+
Mm9::chr19:10058755..10058816,-p@chr19:10058755..10058816
-
Mm9::chr19:10059075..10059109,-p@chr19:10059075..10059109
-
Mm9::chr19:10059296..10059330,-p@chr19:10059296..10059330
-
Mm9::chr19:10059422..10059449,-p@chr19:10059422..10059449
-
Mm9::chr19:10092710..10092727,+p3@Rab3il1
Mm9::chr19:10092731..10092747,+p2@Rab3il1
Mm9::chr19:10092755..10092766,+p6@Rab3il1
Mm9::chr19:10916998..10917014,+p2@Slc15a3
Mm9::chr19:10917021..10917054,+p1@Slc15a3
Mm9::chr19:34549633..34549641,-p1@Ch25h
Mm9::chr19:3907047..3907064,-p1@Tcirg1
Mm9::chr19:3935203..3935247,+p1@Unc93b1
Mm9::chr19:3941548..3941557,+p@chr19:3941548..3941557
+
Mm9::chr19:3941587..3941601,+p@chr19:3941587..3941601
+
Mm9::chr19:5423800..5423821,-p5@Drap1
Mm9::chr19:8553520..8553524,-p@chr19:8553520..8553524
-
Mm9::chr19:8782369..8782387,-p@chr19:8782369..8782387
-
Mm9::chr1:122401326..122401345,-p@chr1:122401326..122401345
-
Mm9::chr1:122401397..122401410,-p1@Marco
Mm9::chr1:130485277..130485309,-p@chr1:130485277..130485309
-
Mm9::chr1:132994376..132994389,-p2@Mapkapk2
Mm9::chr1:136321332..136321352,+p@chr1:136321332..136321352
+
Mm9::chr1:136324692..136324732,+p@chr1:136324692..136324732
+
Mm9::chr1:173160046..173160061,-p@chr1:173160046..173160061
-
Mm9::chr1:173161376..173161395,-p@chr1:173161376..173161395
-
Mm9::chr1:182872565..182872576,+p5@Tmem63a
Mm9::chr1:62750520..62750556,+p7@Nrp2
Mm9::chr1:74422140..74422151,+p4@Slc11a1
Mm9::chr1:74422157..74422179,+p2@Slc11a1
Mm9::chr2:129418528..129418539,+p13@Sirpa
Mm9::chr2:129418554..129418621,+p1@Sirpa
Mm9::chr2:129418658..129418676,+p8@Sirpa
Mm9::chr2:129418702..129418722,+p12@Sirpa
Mm9::chr2:129434696..129434708,+p@chr2:129434696..129434708
+
Mm9::chr2:129441218..129441231,+p@chr2:129441218..129441231
+
Mm9::chr2:129441267..129441284,+p@chr2:129441267..129441284
+
Mm9::chr2:129444232..129444274,+p@chr2:129444232..129444274
+
Mm9::chr2:145647989..145648039,+p2@Rin2
Mm9::chr2:150668101..150668123,-p@chr2:150668101..150668123
-
Mm9::chr2:152656294..152656322,-p6@Bcl2l1
Mm9::chr2:164660363..164660384,+p8@Ctsa
Mm9::chr2:164661129..164661151,+p@chr2:164661129..164661151
+
Mm9::chr2:164662868..164662904,+p@chr2:164662868..164662904
+
Mm9::chr2:164665221..164665252,-p@chr2:164665221..164665252
-
Mm9::chr2:164683134..164683152,-p1@Pltp
Mm9::chr2:164683171..164683182,-p2@Pltp
Mm9::chr2:167487014..167487091,-p1@Tmem189
Mm9::chr2:174259049..174259073,-p@chr2:174259049..174259073
-
Mm9::chr2:174264462..174264496,-p2@Ctsz
Mm9::chr2:24200927..24200942,+p4@Il1rn
Mm9::chr2:30122033..30122084,+p2@Phyhd1
Mm9::chr2:44967810..44967824,+p1@Gm13476
Mm9::chr2:84371517..84371546,-p1@ENSMUST00000139492
Mm9::chr2:90883080..90883130,+p2@Rapsn
Mm9::chr2:91046690..91046714,+p@chr2:91046690..91046714
+
Mm9::chr2:91805722..91805753,-p3@Dgkz
Mm9::chr3:61168477..61168555,+p1@Rap2b
Mm9::chr3:87067440..87067513,-p1@Fcrls
Mm9::chr3:87067576..87067584,-p3@Fcrls
Mm9::chr3:87067625..87067636,-p2@Fcrls
Mm9::chr3:88130335..88130366,+p@chr3:88130335..88130366
+
Mm9::chr3:89153861..89153881,-p2@Adam15
Mm9::chr3:89153890..89153923,-p1@Adam15
Mm9::chr4:125181320..125181322,+p1@Ftl2
Mm9::chr4:130372754..130372768,+p7@Sdc3
Mm9::chr4:130482680..130482694,+p@chr4:130482680..130482694
+
Mm9::chr4:130484552..130484571,+p@chr4:130484552..130484571
+
Mm9::chr4:130486699..130486717,+p@chr4:130486699..130486717
+
Mm9::chr4:130490372..130490383,+p@chr4:130490372..130490383
+
Mm9::chr4:130490423..130490447,+p@chr4:130490423..130490447
+
Mm9::chr4:130490496..130490508,+p@chr4:130490496..130490508
+
Mm9::chr4:130490554..130490588,+p@chr4:130490554..130490588
+
Mm9::chr4:130490809..130490822,+p8@Laptm5
Mm9::chr4:130490845..130490859,+p5@Laptm5
Mm9::chr4:130490861..130490874,+p4@Laptm5
Mm9::chr4:136436188..136436200,-p@chr4:136436188..136436200
-
Mm9::chr4:136436294..136436312,-p@chr4:136436294..136436312
-
Mm9::chr4:136436432..136436444,-p@chr4:136436432..136436444
-
Mm9::chr4:136436468..136436484,-p@chr4:136436468..136436484
-
Mm9::chr4:136436490..136436509,-p@chr4:136436490..136436509
-
Mm9::chr4:136436677..136436688,-p@chr4:136436677..136436688
-
Mm9::chr4:136441986..136442025,-p2@C1qb
Mm9::chr4:136442026..136442070,-p1@C1qb
Mm9::chr4:136442104..136442115,-p3@C1qb
Mm9::chr4:136446198..136446209,-p@chr4:136446198..136446209
-
Mm9::chr4:136446241..136446258,-p@chr4:136446241..136446258
-
Mm9::chr4:136448765..136448769,-p2@C1qc
Mm9::chr4:136448776..136448779,-p3@C1qc
Mm9::chr4:136448782..136448852,-p1@C1qc
Mm9::chr4:136452194..136452198,-p@chr4:136452194..136452198
-
Mm9::chr4:136452258..136452269,-p@chr4:136452258..136452269
-
Mm9::chr4:136454677..136454707,-p1@C1qa
Mm9::chr4:136454725..136454738,-p2@C1qa
Mm9::chr4:136454741..136454753,-p3@C1qa
Mm9::chr4:136454755..136454765,-p4@C1qa
Mm9::chr4:141161891..141161923,-p3@Fblim1
Mm9::chr4:141573894..141573905,+p1@ENSMUST00000126231
Mm9::chr4:144482794..144482810,+p10@Dhrs3
Mm9::chr4:30629892..30629897,-p1@ENSMUST00000118491
Mm9::chr4:44025826..44025855,+p@chr4:44025826..44025855
+
Mm9::chr5:101148694..101148725,-p1@Hpse
Mm9::chr5:114395459..114395475,+p@chr5:114395459..114395475
+
Mm9::chr5:115120062..115120076,-p@chr5:115120062..115120076
-
Mm9::chr5:115140915..115140979,-p1@Gltp
Mm9::chr5:121902348..121902426,-p1@Erp29
Mm9::chr5:123157555..123157636,+p1@P2rx4
Mm9::chr5:138670967..138670977,+p3@BC055004
p3@LOC100504821
Mm9::chr5:138671062..138671077,+p2@BC055004
p2@LOC100504821
Mm9::chr5:138671095..138671109,+p1@BC055004
p1@LOC100504821
Mm9::chr5:139230479..139230561,+p2@Fam20c
Mm9::chr5:139231026..139231044,+p1@Fam20c
Mm9::chr5:140865142..140865208,-p1@Snx8
Mm9::chr5:141211510..141211521,+p5@Amz1
Mm9::chr5:144225442..144225520,+p1@Daglb
Mm9::chr5:22938970..22938981,+p@chr5:22938970..22938981
+
Mm9::chr5:24046758..24046768,-p3@Asb10
Mm9::chr5:66542887..66542920,-p5@Rbm47
Mm9::chr6:113339029..113339053,+p3@Ttll3
Mm9::chr6:123179865..123179881,+p1@Clec4n
Mm9::chr6:123179940..123179945,+p2@Clec4n
Mm9::chr6:125021310..125021323,+p3@Lpar5
Mm9::chr6:29476684..29476685,+p6@Irf5
Mm9::chr6:29476690..29476724,+p1@Irf5
Mm9::chr6:29479308..29479325,+p3@Irf5
Mm9::chr6:38868995..38869028,+p1@Tbxas1
Mm9::chr6:48791372..48791411,-p6@Tmem176b
Mm9::chr6:48986604..48986624,+p2@Gpnmb
Mm9::chr6:48986638..48986657,+p1@Gpnmb
Mm9::chr6:48992765..48992800,+p@chr6:48992765..48992800
+
Mm9::chr6:48992877..48992890,-p@chr6:48992877..48992890
-
Mm9::chr6:48992884..48992893,+p@chr6:48992884..48992893
+
Mm9::chr6:48992901..48992908,-p@chr6:48992901..48992908
-
Mm9::chr6:48993990..48994006,+p@chr6:48993990..48994006
+
Mm9::chr6:48995347..48995356,+p@chr6:48995347..48995356
+
Mm9::chr6:48995364..48995370,+p@chr6:48995364..48995370
+
Mm9::chr6:48995408..48995424,+p@chr6:48995408..48995424
+
Mm9::chr6:48995448..48995454,+p@chr6:48995448..48995454
+
Mm9::chr6:48997291..48997298,+p@chr6:48997291..48997298
+
Mm9::chr6:48997305..48997322,+p@chr6:48997305..48997322
+
Mm9::chr6:48997323..48997341,+p@chr6:48997323..48997341
+
Mm9::chr6:48997360..48997394,+p@chr6:48997360..48997394
+
Mm9::chr6:48997398..48997412,+p@chr6:48997398..48997412
+
Mm9::chr6:48997804..48997812,+p@chr6:48997804..48997812
+
Mm9::chr6:48997886..48997899,+p@chr6:48997886..48997899
+
Mm9::chr6:48997901..48997913,+p@chr6:48997901..48997913
+
Mm9::chr6:48997958..48997979,-p@chr6:48997958..48997979
-
Mm9::chr6:48997989..48998016,+p@chr6:48997989..48998016
+
Mm9::chr6:48997996..48998006,-p@chr6:48997996..48998006
-
Mm9::chr6:48998026..48998063,+p@chr6:48998026..48998063
+
Mm9::chr6:49001848..49001855,+p@chr6:49001848..49001855
+
Mm9::chr6:49006588..49006597,+p@chr6:49006588..49006597
+
Mm9::chr6:52108405..52108422,+p3@ENSMUST00000132559
Mm9::chr6:83005201..83005227,+p@chr6:83005201..83005227
+
Mm9::chr6:88852287..88852345,+p1@Tpra1
Mm9::chr6:88852380..88852408,+p3@Tpra1
Mm9::chr6:88852409..88852422,+p4@Tpra1
Mm9::chr7:107646608..107646622,+p7@Ucp2
Mm9::chr7:107646626..107646651,+p3@Ucp2
Mm9::chr7:107646660..107646719,+p2@Ucp2
Mm9::chr7:107646849..107646870,+p4@Ucp2
Mm9::chr7:108112820..108112855,-p1@P2ry6
Mm9::chr7:108112862..108112883,-p3@P2ry6
Mm9::chr7:108112885..108112909,-p2@P2ry6
Mm9::chr7:109388006..109388026,-p@chr7:109388006..109388026
-
Mm9::chr7:109575088..109575096,+p5@Stim1
Mm9::chr7:132747130..132747139,+p5@Il21r
Mm9::chr7:132747154..132747165,+p4@Il21r
Mm9::chr7:133726841..133726885,-p1@Cln3
p1@LOC100047702
Mm9::chr7:134119129..134119138,+p@chr7:134119129..134119138
+
Mm9::chr7:148662273..148662287,+p7@Tspan4
Mm9::chr7:148662312..148662354,+p2@Tspan4
Mm9::chr7:149562339..149562357,+p@chr7:149562339..149562357
+
Mm9::chr7:149562400..149562423,-p@chr7:149562400..149562423
-
Mm9::chr7:149562531..149562563,-p@chr7:149562531..149562563
-
Mm9::chr7:149562567..149562579,-p@chr7:149562567..149562579
-
Mm9::chr7:149562586..149562605,-p@chr7:149562586..149562605
-
Mm9::chr7:149562624..149562637,-p@chr7:149562624..149562637
-
Mm9::chr7:149562748..149562783,+p@chr7:149562748..149562783
+
Mm9::chr7:149562770..149562783,-p@chr7:149562770..149562783
-
Mm9::chr7:149562796..149562820,-p@chr7:149562796..149562820
-
Mm9::chr7:149562833..149562845,-p@chr7:149562833..149562845
-
Mm9::chr7:149562950..149562965,-p@chr7:149562950..149562965
-
Mm9::chr7:149562971..149562987,-p@chr7:149562971..149562987
-
Mm9::chr7:149563021..149563041,-p@chr7:149563021..149563041
-
Mm9::chr7:149563050..149563073,-p@chr7:149563050..149563073
-
Mm9::chr7:149563320..149563357,-p@chr7:149563320..149563357
-
Mm9::chr7:149566695..149566714,-p@chr7:149566695..149566714
-
Mm9::chr7:149566755..149566791,-p@chr7:149566755..149566791
-
Mm9::chr7:149569354..149569371,-p@chr7:149569354..149569371
-
Mm9::chr7:149569374..149569400,-p@chr7:149569374..149569400
-
Mm9::chr7:149569404..149569441,-p@chr7:149569404..149569441
-
Mm9::chr7:149571411..149571494,-p@chr7:149571411..149571494
-
Mm9::chr7:149571498..149571516,-p@chr7:149571498..149571516
-
Mm9::chr7:149571784..149571806,-p@chr7:149571784..149571806
-
Mm9::chr7:149573725..149573750,-p1@Ctsd
Mm9::chr7:149573758..149573790,-p2@Ctsd
Mm9::chr7:16833121..16833136,-p@chr7:16833121..16833136
-
Mm9::chr7:16833854..16833865,-p@chr7:16833854..16833865
-
Mm9::chr7:26067619..26067702,+p2@Cic
Mm9::chr7:26412623..26412671,+p1@B3gnt8
Mm9::chr7:28318716..28318728,-p@chr7:28318716..28318728
-
Mm9::chr7:28326797..28326817,-p@chr7:28326797..28326817
-
Mm9::chr7:28338157..28338268,-p3@Pld3
Mm9::chr7:29581028..29581089,+p@chr7:29581028..29581089
+
Mm9::chr7:31199359..31199390,+p@chr7:31199359..31199390
+
Mm9::chr7:31663111..31663150,-p2@Cd22
Mm9::chr7:31826504..31826516,-p8@Fxyd5
Mm9::chr7:52713453..52713456,+p@chr7:52713453..52713456
+
Mm9::chr7:53176788..53176817,-p2@Emp3
Mm9::chr7:53971062..53971078,-p1@Saa3
Mm9::chr7:54305980..54305991,+p3@Tmem86a
Mm9::chr7:54305998..54306016,+p2@Tmem86a
Mm9::chr7:87236560..87236570,+p@chr7:87236560..87236570
+
Mm9::chr8:108674259..108674317,+p1@Pla2g15
Mm9::chr8:108674323..108674338,+p2@Pla2g15
Mm9::chr8:118230627..118230659,-p@chr8:118230627..118230659
-
Mm9::chr8:122334163..122334181,-p@chr8:122334163..122334181
-
Mm9::chr8:124830874..124830875,+p@chr8:124830874..124830875
+
Mm9::chr8:124951607..124951611,-p@chr8:124951607..124951611
-
Mm9::chr8:128253905..128253926,+p2@Ntpcr
Mm9::chr8:13165860..13165872,+p@chr8:13165860..13165872
+
Mm9::chr8:13165892..13165907,+p@chr8:13165892..13165907
+
Mm9::chr8:13171220..13171267,+p@chr8:13171220..13171267
+
Mm9::chr8:67471076..67471154,+p1@Tmem192
Mm9::chr8:73140046..73140060,+p@chr8:73140046..73140060
+
Mm9::chr8:73140715..73140829,+p1@Lrrc25
Mm9::chr8:74061301..74061367,-p1@Bst2
Mm9::chr8:74082805..74082818,-p3@Tmem221
Mm9::chr8:74082869..74082882,-p1@Tmem221
Mm9::chr8:74135059..74135099,+p1@Glt25d1
Mm9::chr8:87432606..87432622,+p6@Dnase2a
Mm9::chr8:87432636..87432666,+p1@Dnase2a
Mm9::chr8:87607202..87607222,+p1@Man2b1
Mm9::chr8:87611076..87611103,+p@chr8:87611076..87611103
+
Mm9::chr8:87611139..87611151,+p@chr8:87611139..87611151
+
Mm9::chr9:21935055..21935084,-p3@Acp5
Mm9::chr9:55959942..55959955,+p@chr9:55959942..55959955
+
Mm9::chr9:59387450..59387524,+p1@Hexa
Mm9::chrX:163467580..163467584,-p1@ENSMUST00000119072
Mm9::chrX:20447402..20447424,+p1@Timp1
Mm9::chrX:20448235..20448254,+p@chrX:20448235..20448254
+
Mm9::chrX:20505224..20505243,-p4@Cfp
Mm9::chrX:20505630..20505641,-p@chrX:20505630..20505641
-
Mm9::chrX:20505898..20505909,-p@chrX:20505898..20505909
-
Mm9::chrX:20508589..20508607,-p2@Cfp
Mm9::chrX:20508621..20508643,-p1@Cfp
Mm9::chrX:71547725..71547740,+p3@Atp6ap1
Mm9::chrX:7341077..7341091,+p5@Tfe3
Mm9::chrX:87990109..87990122,+p@chrX:87990109..87990122
+
Mm9::chrX:87990308..87990324,-p@chrX:87990308..87990324
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0005773vacuole1.73726068848011e-14
GO:0005764lysosome1.73726068848011e-14
GO:0000323lytic vacuole1.73726068848011e-14
GO:0044425membrane part0.000275596735276135
GO:0050778positive regulation of immune response0.000611463874054014
GO:0002684positive regulation of immune system process0.000611463874054014
GO:0006956complement activation0.000791154806383559
GO:0002541activation of plasma proteins during acute inflammatory response0.000791154806383559
GO:0051234establishment of localization0.000791154806383559
GO:0050776regulation of immune response0.000791154806383559
GO:0002682regulation of immune system process0.000791154806383559
GO:0016020membrane0.000791154806383559
GO:0002253activation of immune response0.000791154806383559
GO:0002526acute inflammatory response0.000791154806383559
GO:0051240positive regulation of multicellular organismal process0.000791154806383559
GO:0006810transport0.000822618224704687
GO:0002376immune system process0.00109439577733462
GO:0051179localization0.00109439577733462
GO:0044421extracellular region part0.00109439577733462
GO:0016021integral to membrane0.00115286977098732
GO:0031224intrinsic to membrane0.00121367800445215
GO:0015698inorganic anion transport0.0017250345155695
GO:0006811ion transport0.00206622470122757
GO:0044444cytoplasmic part0.00235835098026683
GO:0006954inflammatory response0.00273903348857772
GO:0015929hexosaminidase activity0.00359507772731217
GO:0006820anion transport0.0041235537819775
GO:0009605response to external stimulus0.0051921815350505
GO:0005737cytoplasm0.00613120341799595
GO:0005615extracellular space0.00691068556012315
GO:0015674di-, tri-valent inorganic cation transport0.00780009459081202
GO:0002252immune effector process0.00803762011218571
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds0.00803762011218571
GO:0045087innate immune response0.00865564177427856
GO:0006955immune response0.00865564177427856
GO:0004630phospholipase D activity0.011482870478953
GO:0009611response to wounding0.0158361804333372
GO:0005044scavenger receptor activity0.0158361804333372
GO:0006508proteolysis0.0158361804333372
GO:0006826iron ion transport0.0166798692878943
GO:0005770late endosome0.0166798692878943
GO:0016798hydrolase activity, acting on glycosyl bonds0.0166798692878943
GO:0006958complement activation, classical pathway0.0198452974528791
GO:0006817phosphate transport0.0214805798918342
GO:0016064immunoglobulin mediated immune response0.0247600922973493
GO:0019724B cell mediated immunity0.0255509785076298
GO:0002455humoral immune response mediated by circulating immunoglobulin0.029087701092106
GO:0006952defense response0.0298776415771712
GO:0006629lipid metabolic process0.0310014694863314
GO:0008199ferric iron binding0.0356975997207489
GO:0006959humoral immune response0.0385086623717189
GO:0051239regulation of multicellular organismal process0.0447757708370326
GO:0048878chemical homeostasis0.0458889659259333
GO:0002460adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains0.0492239363646334
GO:0002250adaptive immune response0.0492239363646334



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
musculoskeletal system7.62e-1232
bone element5.91e-0822
skeletal element5.91e-0822
skeletal system5.91e-0822
bone marrow1.24e-0716
trunk mesenchyme1.31e-0745


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10.0662968
MA0004.13.20075
MA0006.10.00154965
MA0007.10.636283
MA0009.10.447678
MA0014.15.95489e-07
MA0017.10.201974
MA0019.10.135429
MA0024.10.326882
MA0025.10.0494712
MA0027.10.881957
MA0028.10.0567862
MA0029.10.0487529
MA0030.10.00725989
MA0031.10.000850639
MA0038.10.454002
MA0040.10.0049426
MA0041.10.000257841
MA0042.10.000323757
MA0043.10.36302
MA0046.10.0251942
MA0048.10.107642
MA0050.12.1606
MA0051.11.81698
MA0052.10.021104
MA0055.10.365069
MA0056.10
MA0057.10.115395
MA0058.17.27798
MA0059.11.23958
MA0060.10.0150757
MA0061.11.02378
MA0063.10
MA0066.12.07308
MA0067.10.254246
MA0068.10.00107368
MA0069.10.118878
MA0070.10.0509531
MA0071.11.13004
MA0072.11.1201
MA0073.13.68346e-08
MA0074.12.61139
MA0076.10.0074261
MA0077.10.153568
MA0078.10.0281397
MA0081.11.5915
MA0083.10.11143
MA0084.10.130872
MA0087.10.00841937
MA0088.10.681968
MA0089.10
MA0090.10.709589
MA0091.10.247316
MA0092.10.494685
MA0093.16.10571
MA0095.10
MA0098.10
MA0100.10.627889
MA0101.10.685459
MA0103.12.44979
MA0105.10.519422
MA0106.10.435284
MA0107.10.411693
MA0108.20.0299909
MA0109.10
MA0111.10.138958
MA0113.10.708026
MA0114.10.324789
MA0115.10.114694
MA0116.11.59515
MA0117.10.916216
MA0119.10.00536306
MA0122.11.00875
MA0124.10.0746367
MA0125.10.442632
MA0130.10
MA0131.10.0409125
MA0132.10
MA0133.10
MA0135.10.275706
MA0136.10.440099
MA0139.10.0295259
MA0140.10.0137824
MA0141.10.745197
MA0142.10.000640015
MA0143.10.00181537
MA0144.10.0319679
MA0145.12.61004
MA0146.10.0725078
MA0147.10.279208
MA0148.10.00835317
MA0149.10.525847
MA0062.20.0929449
MA0035.20.000439477
MA0039.20.236663
MA0138.20.84358
MA0002.21.05995
MA0137.20.141531
MA0104.20.759181
MA0047.20.0121997
MA0112.21.99601
MA0065.22.017
MA0150.10.635383
MA0151.10
MA0152.10.0451437
MA0153.10.0041997
MA0154.13.97686
MA0155.10.680494
MA0156.10.299094
MA0157.10.0390899
MA0158.10
MA0159.11.93187
MA0160.10.072312
MA0161.10
MA0162.10.000984567
MA0163.10.275277
MA0164.10.0276617
MA0080.23.63329
MA0018.20.0933808
MA0099.20.633951
MA0079.22.83473e-10
MA0102.20.475943
MA0258.11.70781
MA0259.10.0341578
MA0442.10
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