NonredundantMotifs:184: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=256297
|motif_cluster_2013_march_motif_members= /HOCOMOCO:PTF1A_f1
|name=known184
|representative_motif_db=HOCOMOCO
|representative_motif_i...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;2.0918367346938798;4.642857142857141;1.1734693877551;2.0918367346938798!2;4.3877551020408205;0.0;3.7755102040816304;1.83673469387755!3;1.83673469387755;1.02040816326531;7.1428571428571495;0.0!4;0.0;1.83673469387755;8.163265306122451;0.0!5;5.6122448979591795;0.0;4.3877551020408205;0.0!6;7.1428571428571495;1.02040816326531;1.83673469387755;0.0!7;8.979591836734691;0.0;0.0;1.02040816326531!8;2.6530612244898;3.6734693877551;1.7346938775510201;1.93877551020408!9;3.6734693877551;1.7346938775510201;0.918367346938776;3.6734693877551!10;0.918367346938776;3.57142857142857;4.48979591836735;1.02040816326531!11;4.59183673469388;2.7551020408163303;0.918367346938776;1.7346938775510201!12;6.3265306122449;1.93877551020408;1.7346938775510201;0.0!13;1.02040816326531;8.979591836734691;0.0;0.0!14;8.163265306122451;0.0;0.0;1.83673469387755!15;0.0;2.7551020408163303;5.510204081632651;1.7346938775510201!16;1.93877551020408;5.30612244897959;2.7551020408163303;0.0!17;1.83673469387755;0.0;0.0;8.163265306122451!18;0.0;0.0;10.0;0.0!19;1.7346938775510201;3.6734693877551;0.0;4.59183673469388!20;0.0;5.20408163265306;4.79591836734694;0.0!21;2.5255102040816304;5.280612244897959;0.688775510204082;1.5051020408163298 | |||
|entrez_gene_id=256297 | |entrez_gene_id=256297 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:PTF1A_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:PTF1A_f1 | ||
|name= | |name=non-redundant184 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=PTF1A_f1 | |representative_motif_id=PTF1A_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant184
- db :HOCOMOCO
- Id :PTF1A_f1
- name :
- score :0.30416999849236315
- External refs:
- Internal refs:
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Sub Motif Members
