FFCP PHASE1:Hg19::chr6:3738322..3738334,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:3738322..3738334,-
|short_description=p14@PXDC1
|description=CAGE_peak_14_at_PXDC1_5end
|association_with_transcript=48bp_to_BC045715_5end
|EntrezGene=221...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221749 | |EntrezGene=221749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21361 | |HGNC=21361 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TGL8 | |UniProt=Q5TGL8 | ||
|association_with_transcript=48bp_to_BC045715_5end | |||
|cluster_id=chr6:3738322..3738334,- | |||
|description=CAGE_peak_14_at_PXDC1_5end | |||
|id=chr6:3738322..3738334,- | |||
|ontology_enrichment_celltype=CL:0000222!1.42e-07!119;CL:0000220!5.99e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000135;4.37e-21;3!CL:0000388;4.37e-21;3!CL:0000632;2.52e-10;3!CL:0002579;4.50e-10;3!CL:0002616;1.01e-08;1!CL:0002174;3.56e-08;1!CL:0000501;3.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.53e-21,3;CL:0000388,2.53e-21,3;CL:0000632,3.12e-10,3;CL:0002579,3.42e-10,3;CL:0002616,1.05e-08,1;CL:0002174,3.10e-08,1;CL:0000501,3.10e-08,1;CL:0000057,2.25e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,5.43e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.37e-21;3!UBERON:0000043;4.37e-21;3!UBERON:0007845;4.37e-21;3!UBERON:0003688;4.66e-11;6!UBERON:0002358;4.66e-11;6!UBERON:0003684;4.66e-11;6!UBERON:0001178;4.66e-11;6!UBERON:0004457;1.58e-07;9!UBERON:0000042;1.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.53e-21,3;UBERON:0000043,2.53e-21,3;UBERON:0007845,2.53e-21,3;UBERON:0003688,3.87e-11,6;UBERON:0002358,3.87e-11,6;UBERON:0003684,3.87e-11,6;UBERON:0001178,3.87e-11,6 | |||
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| ||
|short_description=p14@PXDC1 | |||
}} | }} |
Latest revision as of 14:47, 18 September 2015
Short description: | p14@PXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_BC045715_5end |
EntrezGene: | PXDC1 |
HGNC: | 21361 |
UniProt: | Q5TGL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.53e-21 | 3 |
tendon cell | 2.53e-21 | 3 |
hepatic stellate cell | 3.12e-10 | 3 |
omentum preadipocyte | 3.42e-10 | 3 |
perirenal adipocyte cell | 1.05e-08 | 1 |
follicular cell of ovary | 3.10e-08 | 1 |
granulosa cell | 3.10e-08 | 1 |
fibroblast | 2.25e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.53e-21 | 3 |
tendon | 2.53e-21 | 3 |
regular connective tissue | 2.53e-21 | 3 |
omentum | 3.87e-11 | 6 |
peritoneum | 3.87e-11 | 6 |
abdominal cavity | 3.87e-11 | 6 |
visceral peritoneum | 3.87e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.43e-08 | 1 |