FFCP PHASE1:Hg19::chr6:7568048..7568061,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:7568048..7568061,+
|short_description=p@chr6:7568048..7568061,+
|description=CAGE_peak_at_chr6:7568048..7568061,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:7568048..7568061,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7568048..7568061,+ | |||
|id=chr6:7568048..7568061,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.14e-19!254;CL:0002076!6.64e-16!43;CL:0000223!1.80e-14!59;CL:0002251!1.42e-12!21 | |||
|ontology_enrichment_celltype_v019=CL:0002231;9.29e-15;3!CL:0000622;1.55e-09;5!CL:0002537;2.22e-09;5!CL:0000154;4.34e-08;6!CL:0002159;2.71e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.32e-14,3;CL:0000622,1.55e-09,5;CL:0002537,1.84e-09,5;CL:0000154,4.34e-08,6;CL:0002159,2.92e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.29e-12;1!UBERON:0008814;9.18e-07;2!UBERON:0010056;9.18e-07;2 | |||
|ontology_enrichment_disease=DOID:305!4.86e-12!106;DOID:0050687!2.62e-09!143;DOID:299!2.34e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.91e-12!169;UBERON:0000925!2.91e-12!169;UBERON:0006595!2.91e-12!169;UBERON:0001007!4.23e-09!155;UBERON:0001555!4.23e-09!155;UBERON:0007026!4.23e-09!155;UBERON:0004921!1.25e-07!129;UBERON:0004185!1.25e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.07e-11;1!UBERON:0005631;3.52e-10;10!UBERON:0000158;3.52e-10;10!UBERON:0000974;5.84e-08;6!UBERON:0000305;6.11e-07;7!UBERON:0001003;7.72e-07;15!UBERON:0007376;7.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,7.76e-12,1;UBERON:0005631,1.89e-07,14;UBERON:0000158,1.89e-07,14;UBERON:0003102,2.07e-07,99;UBERON:0000161,3.17e-07,36;UBERON:0000305,5.34e-07,7;UBERON:0001003,7.20e-07,15;UBERON:0007376,7.20e-07,15;UBERON:0007383,7.20e-07,15 | |||
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| ||
|short_description=p@chr6:7568048..7568061,+ | |||
}} | }} |
Latest revision as of 03:09, 31 July 2015
Short description: | p@chr6:7568048..7568061, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7568048..7568061, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.32e-14 | 3 |
acinar cell | 1.55e-09 | 5 |
amnion mesenchymal stem cell | 1.84e-09 | 5 |
protein secreting cell | 4.34e-08 | 6 |
general ecto-epithelial cell | 2.92e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
surface | 7.76e-12 | 1 |
extraembryonic membrane | 1.89e-07 | 14 |
membranous layer | 1.89e-07 | 14 |
surface structure | 2.07e-07 | 99 |
orifice | 3.17e-07 | 36 |
amnion | 5.34e-07 | 7 |
skin epidermis | 7.20e-07 | 15 |
outer epithelium | 7.20e-07 | 15 |
enveloping layer of ectoderm | 7.20e-07 | 15 |