FFCP PHASE1:Hg19::chr7:100808620..100808648,-: Difference between revisions
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|id=chr7:100808620..100808648,-
|short_description=p4@VGF
|description=CAGE_peak_4_at_VGF_5end
|association_with_transcript=-225bp_to_ENST00000445482_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7425 | |EntrezGene=7425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12684 | |HGNC=12684 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-225bp_to_ENST00000445482_5end | |||
|cluster_id=chr7:100808620..100808648,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_4_at_VGF_5end | |||
|id=chr7:100808620..100808648,- | |||
|ontology_enrichment_celltype=CL:0002553!4.89e-08!1;CL:0002601!5.22e-08!1;CL:0002566!2.17e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.82e-14!2;DOID:3371!2.80e-07!1;DOID:4549!2.80e-07!1;DOID:5861!2.80e-07!1;DOID:6496!2.80e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.29e-195;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.29e-195,2 | |||
|ontology_enrichment_uberon=UBERON:0000988!2.53e-09!3;UBERON:0001049!6.68e-09!57;UBERON:0005068!6.68e-09!57;UBERON:0006241!6.68e-09!57;UBERON:0007135!6.68e-09!57;UBERON:0002616!1.50e-08!59;UBERON:0000955!1.66e-08!69;UBERON:0006238!1.66e-08!69;UBERON:0001874!8.28e-08!1;UBERON:0002298!1.72e-07!8;UBERON:0007190!1.91e-07!1;UBERON:0002581!2.04e-07!1;UBERON:0001282!2.47e-07!1;UBERON:0009842!2.47e-07!1;UBERON:0003704!2.47e-07!1;UBERON:0001171!2.47e-07!1;UBERON:0001172!2.47e-07!1;UBERON:0000073!6.12e-07!94;UBERON:0001016!6.12e-07!94;UBERON:0001017!6.79e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.82e-27;15!UBERON:0007376;1.82e-27;15!UBERON:0010371;1.90e-14;31!UBERON:0002097;1.58e-09;41!UBERON:0003102;7.93e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.82e-27,15;UBERON:0007376,1.82e-27,15;UBERON:0007383,1.82e-27,15;UBERON:0002097,6.32e-11,41;UBERON:0002199,7.07e-10,46;UBERON:0002416,7.07e-10,46 | |||
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|short_description=p4@VGF | |||
}} | }} |
Latest revision as of 17:12, 24 September 2015
Short description: | p4@VGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VGF_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -225bp_to_ENST00000445482_5end |
EntrezGene: | VGF |
HGNC: | 12684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.82e-27 | 15 |
outer epithelium | 1.82e-27 | 15 |
enveloping layer of ectoderm | 1.82e-27 | 15 |
skin of body | 6.32e-11 | 41 |
integument | 7.07e-10 | 46 |
integumental system | 7.07e-10 | 46 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.29e-195 | 2 |