FFCP PHASE1:Hg19::chr7:27183141..27183152,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:27183141..27183152,-
|short_description=p6@HOXA5
|description=CAGE_peak_6_at_HOXA5_5end
|association_with_transcript=73bp_to_AB587591,BT009744,CR542256,CR5...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3202 | |EntrezGene=3202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5106 | |HGNC=5106 | ||
|TSSclassifier=strong | |||
|UniProt=P20719,Q6FG31 | |UniProt=P20719,Q6FG31 | ||
|association_with_transcript=73bp_to_AB587591,BT009744,CR542256,CR542277,DQ890593,DQ893761_5end | |||
|cluster_id=chr7:27183141..27183152,- | |||
|coexpression_cluster_id=C1992 | |||
|description=CAGE_peak_6_at_HOXA5_5end | |||
|id=chr7:27183141..27183152,- | |||
|ontology_enrichment_celltype=CL:0002334!2.44e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0002593;4.46e-21;2!CL:0000094;1.80e-20;8!CL:0000081;5.78e-15;11!CL:0000775;1.61e-14;3!CL:0000767;1.98e-14;3!CL:0000037;3.63e-11;1!CL:0001024;3.63e-11;1!CL:0002595;5.38e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,2.83e-21,2;CL:0000094,1.89e-20,8;CL:0000081,6.00e-15,11;CL:0000775,1.32e-14,3;CL:0000767,2.59e-14,3;CL:0001024,4.91e-11,1;CL:0002595,4.49e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.87e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.23e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.57e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;4.46e-21;2!UBERON:0002118;4.49e-09;5!UBERON:0003834;5.38e-09;5!UBERON:0001533;5.38e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.83e-21,2;UBERON:0003834,4.49e-09,5;UBERON:0001533,4.49e-09,5;UBERON:0002118,4.68e-09,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,0,0.446961094427288,0.872338524100369,0,0,0,0.737201809504527,0,0,0,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,5.90046415273356,1.15148819429164,0.154816123316076,0,0,0,0,0,1.17440175733939,0,1.20326668482085,0.434021741431704,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.689491361473237,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0.673971786878971,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,3.39908170018994,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,2.99602809578873,0,2.90090859405225,0.12269149171914,0,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.862856803274467,0.640365346820666,0,0,0,0.248107807818777,0,0.280660094433074,0.768834895534206,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.492762936082855,0.519254429183621,1.39452454151951,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,1.94970791705028,3.16950440270266,0,0,0,0.551365343546124,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80175617316141,0.171594997861965,0,0.124252535565433,0.471388069233591,0,0,0,6.0679623879319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,1.13312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.983617892129413,0,0,0,0,0,0,0,0,0,1.21319294033318,0,0,0,0,0.298509605773748,0.934853239388898,0.554805861502613,0,0,0,0.457680136793847,0,0.466311601748341,0,0.318593534327405,0.899606224327209,0.310525913752519,0,0.265841714557995,0,1.20206087197775,0.380805212168795,2.44122439922797,0.181848659202559,2.25562169789226,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.473328002922261,0.426067023795788,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0.231522474323834,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,0,0.446961094427288,0.872338524100369,0,0,0,0.737201809504527,0,0,0,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,5.90046415273356,1.15148819429164,0.154816123316076,0,0,0,0,0,1.17440175733939,0,1.20326668482085,0.434021741431704,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.689491361473237,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0.673971786878971,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,3.39908170018994,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,2.99602809578873,0,2.90090859405225,0.12269149171914,0,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.862856803274467,0.640365346820666,0,0,0,0.248107807818777,0,0.280660094433074,0.768834895534206,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.492762936082855,0.519254429183621,1.39452454151951,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,1.94970791705028,3.16950440270266,0,0,0,0.551365343546124,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80175617316141,0.171594997861965,0,0.124252535565433,0.471388069233591,0,0,0,6.0679623879319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,1.13312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.983617892129413,0,0,0,0,0,0,0,0,0,1.21319294033318,0,0,0,0,0.298509605773748,0.934853239388898,0.554805861502613,0,0,0,0.457680136793847,0,0.466311601748341,0,0.318593534327405,0.899606224327209,0.310525913752519,0,0.265841714557995,0,1.20206087197775,0.380805212168795,2.44122439922797,0.181848659202559,2.25562169789226,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.473328002922261,0.426067023795788,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0.231522474323834,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@HOXA5 | |||
}} | }} |
Latest revision as of 01:29, 18 September 2015
Short description: | p6@HOXA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOXA5_5end |
Coexpression cluster: | C1992_Mesothelial_glioma_Smooth_Basophils_mesenchymal_Neutrophils_gastric |
Association with transcript: | 73bp_to_AB587591, BT009744, CR542256, CR542277, DQ890593, DQ893761_5end |
EntrezGene: | HOXA5 |
HGNC: | 5106 |
UniProt: | P20719Q6FG31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.83e-21 | 2 |
granulocyte | 1.89e-20 | 8 |
blood cell | 6.00e-15 | 11 |
neutrophil | 1.32e-14 | 3 |
basophil | 2.59e-14 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.91e-11 | 1 |
smooth muscle cell of the subclavian artery | 4.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 2.83e-21 | 2 |
thoracic segment blood vessel | 4.49e-09 | 5 |
subclavian artery | 4.49e-09 | 5 |
right ovary | 4.68e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.57e-07 | 14 |