FFCP PHASE1:Hg19::chr7:55583693..55583705,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:55583693..55583705,-
|short_description=p10@VOPP1
|description=CAGE_peak_10_at_VOPP1_5end
|association_with_transcript=64bp_to_ENST00000453256_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81552 | |EntrezGene=81552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34518 | |HGNC=34518 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIM1 | |UniProt=C9JIM1 | ||
|association_with_transcript=64bp_to_ENST00000453256_5end | |||
|cluster_id=chr7:55583693..55583705,- | |||
|description=CAGE_peak_10_at_VOPP1_5end | |||
|id=chr7:55583693..55583705,- | |||
|ontology_enrichment_celltype=CL:0000945!2.28e-41!24;CL:0000826!2.28e-41!24;CL:0000236!1.65e-25!14;CL:0000542!3.40e-22!53;CL:0000051!3.40e-22!53;CL:0000838!2.19e-20!52;CL:0000738!1.65e-10!140;CL:0002087!2.61e-09!119;CL:0000037!1.05e-08!172;CL:0000566!1.05e-08!172;CL:0000988!7.84e-08!182;CL:0002032!8.60e-08!165;CL:0000837!8.60e-08!165;CL:0002031!9.74e-08!124;CL:0000785!4.87e-07!2;CL:0000955!4.87e-07!2;CL:0000818!4.87e-07!2;CL:0000954!4.87e-07!2;CL:0000816!4.87e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.10e-38;13!CL:0000945;1.31e-29;24!CL:0000542;7.57e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.24e-35,14;CL:0000945,1.25e-29,24;CL:0000826,1.25e-29,24;CL:0000542,3.91e-18,53;CL:0000051,3.91e-18,53;CL:0000838,1.08e-13,52;CL:0002087,3.76e-08,115;CL:0000738,7.56e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.31e-21;1!CL:0000051;7.57e-14;53 | |||
|ontology_enrichment_disease=DOID:0060058!7.09e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.08e-21;1!DOID:0050177;2.08e-21;1!DOID:0050427;2.08e-21;1!DOID:12603;3.12e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.30e-21,1;DOID:0050177,2.30e-21,1;DOID:0050427,2.30e-21,1;DOID:12603,3.45e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-12!115;UBERON:0004177!2.40e-10!7;UBERON:0002106!7.24e-10!3;UBERON:0004854!7.24e-10!3;UBERON:0009034!7.24e-10!3;UBERON:0002095!7.24e-10!3;UBERON:0004782!7.24e-10!3;UBERON:0003281!7.24e-10!3;UBERON:0009664!7.24e-10!3;UBERON:0002296!7.24e-10!3;UBERON:0005602!7.24e-10!3;UBERON:0001179!7.24e-10!3;UBERON:0006293!7.24e-10!3;UBERON:0003296!3.41e-07!4;UBERON:0010133!3.41e-07!4;UBERON:0001905!5.33e-07!2;UBERON:0002757!5.33e-07!2;UBERON:0010134!5.33e-07!2;UBERON:0002784!5.33e-07!2;UBERON:0005408!5.33e-07!2;UBERON:0001899!5.33e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;6.31e-21;1!UBERON:0001153;6.31e-21;1!UBERON:0009854;6.31e-21;1!UBERON:0002106;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.43e-21,1;UBERON:0001153,9.43e-21,1;UBERON:0001045,9.43e-21,1;UBERON:0002106,6.78e-08,3;UBERON:0004854,6.78e-08,3;UBERON:0009034,6.78e-08,3;UBERON:0002095,6.78e-08,3;UBERON:0004782,6.78e-08,3;UBERON:0003281,6.78e-08,3;UBERON:0009664,6.78e-08,3;UBERON:0002296,6.78e-08,3;UBERON:0005602,6.78e-08,3;UBERON:0001179,6.78e-08,3;UBERON:0006293,6.78e-08,3 | |||
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| ||
|short_description=p10@VOPP1 | |||
}} | }} |
Latest revision as of 01:29, 19 September 2015
Short description: | p10@VOPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_VOPP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000453256_5end |
EntrezGene: | VOPP1 |
HGNC: | 34518 |
UniProt: | C9JIM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.24e-35 | 14 |
lymphocyte of B lineage | 1.25e-29 | 24 |
pro-B cell | 1.25e-29 | 24 |
lymphocyte | 3.91e-18 | 53 |
common lymphoid progenitor | 3.91e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.08e-13 | 52 |
nongranular leukocyte | 3.76e-08 | 115 |
leukocyte | 7.56e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 9.43e-21 | 1 |
caecum | 9.43e-21 | 1 |
midgut | 9.43e-21 | 1 |
spleen | 6.78e-08 | 3 |
gastrointestinal system mesentery | 6.78e-08 | 3 |
stomach region | 6.78e-08 | 3 |
mesentery | 6.78e-08 | 3 |
gastrointestinal system serosa | 6.78e-08 | 3 |
mesentery of stomach | 6.78e-08 | 3 |
gut mesentery | 6.78e-08 | 3 |
dorsal mesentery | 6.78e-08 | 3 |
dorsal mesogastrium | 6.78e-08 | 3 |
peritoneal cavity | 6.78e-08 | 3 |
spleen primordium | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.30e-21 | 1 |
monogenic disease | 2.30e-21 | 1 |
xeroderma pigmentosum | 2.30e-21 | 1 |
acute leukemia | 3.45e-21 | 1 |