FFCP PHASE1:Hg19::chr11:66839234..66839247,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:66839234..66839247,+ | |||
|description=CAGE_peak_at_chr11:66839234..66839247,+ | |||
|id=chr11:66839234..66839247,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.32e-23!254;CL:0002076!6.71e-16!43;CL:0000223!3.15e-10!59;CL:0002368!8.83e-09!13;CL:0000063!4.55e-08!578;CL:0002159!3.77e-07!13;CL:0002202!4.32e-07!9;CL:0002632!4.32e-07!9;CL:0002077!6.68e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.12e-13;13!CL:0002328;6.64e-13;3!CL:0002202;9.80e-11;9!CL:0002632;9.80e-11;9!CL:0002076;1.93e-09;42!CL:0002159;8.78e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.35e-14,42;CL:0002368,8.65e-14,13;CL:0002328,6.73e-13,3;CL:0000223,2.89e-11,58;CL:0002202,9.91e-11,9;CL:0002632,9.91e-11,9;CL:0002159,5.60e-09,14;CL:0000136,7.36e-08,15;CL:0000066,2.80e-07,253;CL:0002077,4.72e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.60e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:114;4.47e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.80e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.75e-09!169;UBERON:0000925!3.75e-09!169;UBERON:0006595!3.75e-09!169;UBERON:0000161!6.36e-08!35;UBERON:0001004!2.54e-07!72;UBERON:0001007!3.12e-07!155;UBERON:0001555!3.12e-07!155;UBERON:0007026!3.12e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.64e-13;3!UBERON:0002031;6.64e-13;3!UBERON:0002185;6.94e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.73e-13,3;UBERON:0002031,6.73e-13,3;UBERON:0002185,6.99e-08,5 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.422863212287913,1.0007329835313,1.34088328328186,3.48935409640147,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,5.51652734687356,5.4217065380085,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.579386075843295,0,0,0.0945348171640679,0,0.527008714158756,0,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.825354125820202,0.208994966536811,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0,0.352303495931295,0,0,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0.919463387397059,0.45071417671979,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,0,0.966304265816484,0.272746120590835,0.860413786167011,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0.473227200159376,0.505754070234305,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0.196221465125346,0,0,0,0,1.47008711385542,0,1.96565443335525,0,0,0,0,1.53650399572076,1.1240175325762,0.804231779293047,0.740707561268237,0,0,0,0,0,0,0,0,4.74122638775565,2.57545848628462,0,0,0,1.87467667973554,1.34385702559088,0.425325291727159,0.358234090811393,1.45316969256981,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08506009479894,1.03985430765404,1.24900292158013,0.473107245101804,0.117141414992713,0,4.5481500811197,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0.606255142892519,0,1.20956117331872,0.248107807818777,0,0.280660094433074,1.02511319404561,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,2.6065841139427,1.84161977871793,0.114814448164607,0.364182336013434,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,5.20048196829217,0,0.290012154876366,0,0,0,0,0.290033387828457,0,0.0890320356467374,1.81813406897076,2.11409074101617,0,0.910420027699949,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0,0,0,0.987884678879706,0,0,0.673554789078584,1.34060455107157,2.17781969722645,0,0.86101074534246,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,3.34242278632766,0.593929361665277,2.45728561679386,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.796554137998498,0.254253650292766,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.179515288819544,0,0.31900115973192,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,1.56203764501618,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.483781656445426,0.146178634172371,0.246346371159628,0.387956065953678,0,0,0,0,0,0.782205530939212,0.160317640503067,0,1.39866726707491,0.144090417154106,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,1.28767814440971,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,1.24632101408756,0,0,0,0,0,0,0,0.35857467866569,1.15149118391667,1.42939065274673,0,0,0,3.45688596480507,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,1.04349012362347,0,0,0,0,0.107410557042488,0.464033759878494,0,0,1.37358282073117,1.01024846629776,0,0,0,0,0,0.463044948647668,0,0,1.23520578864389,0,0,0,0.168942440653073,0,0,0.607719912354764,0,0.194860308839388,0,0,0.327609848846413,0,1.05656061679314,0,0,0,0,0,1.39879507719444,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,3.11828617486854,0.231051332300676,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0.638812138197976,0,0,0.606965604236632,0,0,0,0.171488009437418,0,0,0.236387681767936,0.333694205676207,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,2.0486217251274,0,0,0.236664001461131,0,0,1.3746412112643,0.93061915699296,0,0.111855431797792,0.294450700845729,0.365753774946808,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.76447435857846,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.476128862927481,0,0,0.224263725161227,0,0,1.95945073107265,1.02669990325584,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:66839234..66839247,+ | |||
}} |
Latest revision as of 01:29, 24 July 2015
Short description: | p@chr11:66839234..66839247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66839234..66839247, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.35e-14 | 42 |
respiratory epithelial cell | 8.65e-14 | 13 |
bronchial epithelial cell | 6.73e-13 | 3 |
endodermal cell | 2.89e-11 | 58 |
epithelial cell of tracheobronchial tree | 9.91e-11 | 9 |
epithelial cell of lower respiratory tract | 9.91e-11 | 9 |
general ecto-epithelial cell | 5.60e-09 | 14 |
fat cell | 7.36e-08 | 15 |
epithelial cell | 2.80e-07 | 253 |
ecto-epithelial cell | 4.72e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.73e-13 | 3 |
epithelium of bronchus | 6.73e-13 | 3 |
bronchus | 6.99e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.80e-08 | 2 |