FFCP PHASE1:Hg19::chr16:2881804..2881809,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:2881804..2881809,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_at_chr16:2881804..2881809,+ | |||
|id=chr16:2881804..2881809,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.84e-34;1!UBERON:0008801;7.06e-34;1!UBERON:0008814;9.07e-18;2!UBERON:0010056;9.07e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!7.33e-41!2;UBERON:0000078!1.25e-39!18;UBERON:0000166!5.41e-34!21;UBERON:0001044!1.13e-30!6;UBERON:0003293!1.13e-30!6;UBERON:0003294!1.13e-30!6;UBERON:0010047!1.13e-30!6;UBERON:0000167!1.13e-30!6;UBERON:0001723!1.39e-27!3;UBERON:0001033!1.39e-27!3;UBERON:0010056!1.39e-27!3;UBERON:0000165!1.59e-25!28;UBERON:0000930!1.59e-25!28;UBERON:0001736!1.53e-21!1;UBERON:0006298!1.53e-21!1;UBERON:0001831!3.45e-21!1;UBERON:0001567!3.45e-21!1;UBERON:0008801!3.45e-21!1;UBERON:0002372!9.43e-21!1;UBERON:0001961!9.43e-21!1;UBERON:0001744!9.43e-21!1;UBERON:0001735!9.43e-21!1;UBERON:0000161!1.96e-20!35;UBERON:0003408!1.01e-18!10;UBERON:0001042!1.73e-18!10;UBERON:0009145!1.73e-18!10;UBERON:0006562!7.09e-17!11;UBERON:0001444!6.68e-15!48;UBERON:0004089!2.73e-11!2;UBERON:0000341!3.02e-11!2;UBERON:0001557!4.72e-10!19;UBERON:0001004!6.55e-10!72;UBERON:0007023!3.17e-08!115;UBERON:0003102!1.78e-07!95;UBERON:0001041!3.06e-07!98;UBERON:0000153!3.36e-07!129;UBERON:0007811!3.36e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.03e-66;2!UBERON:0001044;5.37e-50;6!UBERON:0003293;5.37e-50;6!UBERON:0003294;5.37e-50;6!UBERON:0010047;5.37e-50;6!UBERON:0003408;5.37e-50;6!UBERON:0000167;5.37e-50;6!UBERON:0001723;1.22e-44;3!UBERON:0001033;1.22e-44;3!UBERON:0001736;1.84e-34;1!UBERON:0001831;7.06e-34;1!UBERON:0001567;7.06e-34;1!UBERON:0000165;7.53e-30;28!UBERON:0001041;5.39e-22;14!UBERON:0004089;1.07e-17;2!UBERON:0000341;1.27e-17;2!UBERON:0000161;1.94e-16;19!UBERON:0000166;1.94e-16;19!UBERON:0007811;9.44e-15;52!UBERON:0000153;1.54e-14;54!UBERON:0002365;3.61e-10;31!UBERON:0002330;3.61e-10;31!UBERON:0000033;4.37e-10;50!UBERON:0001444;7.17e-09;48!UBERON:0004921;1.43e-08;33!UBERON:0001555;3.91e-08;54!UBERON:0000974;9.49e-07;6!UBERON:0000020;9.95e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.03e-66,2;UBERON:0001044,5.37e-50,6;UBERON:0003293,5.37e-50,6;UBERON:0003294,5.37e-50,6;UBERON:0010047,5.37e-50,6;UBERON:0000167,5.37e-50,6;UBERON:0001723,1.22e-44,3;UBERON:0001033,1.22e-44,3;UBERON:0010056,1.22e-44,3;UBERON:0000166,8.52e-38,22;UBERON:0001736,1.84e-34,1;UBERON:0006298,1.84e-34,1;UBERON:0001831,7.06e-34,1;UBERON:0001567,7.06e-34,1;UBERON:0008801,7.06e-34,1;UBERON:0003408,2.06e-30,10;UBERON:0000165,7.63e-29,29;UBERON:0000930,7.63e-29,29;UBERON:0000161,2.31e-23,36;UBERON:0000153,1.49e-19,62;UBERON:0007811,1.49e-19,62;UBERON:0004089,1.07e-17,2;UBERON:0000341,1.27e-17,2;UBERON:0001444,2.55e-17,49;UBERON:0000033,3.19e-15,56;UBERON:0001042,3.25e-14,10;UBERON:0009145,3.25e-14,10;UBERON:0006562,5.10e-13,11;UBERON:0001004,1.22e-11,74;UBERON:0002365,2.22e-10,31;UBERON:0002330,2.22e-10,31;UBERON:0001041,5.77e-10,87;UBERON:0003102,8.34e-09,99;UBERON:0008814,2.42e-08,18;UBERON:0001557,5.94e-08,19;UBERON:0007023,1.12e-07,114;UBERON:0004921,2.19e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74128883428591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.45341038230416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.4967404902405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0,4.57205170583619,5.81796611844978,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:2881804..2881809,+ | |||
}} |
Latest revision as of 07:43, 25 July 2015
Short description: | p@chr16:2881804..2881809, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2881804..2881809, + |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.03e-66 | 2 |
saliva-secreting gland | 5.37e-50 | 6 |
gland of oral region | 5.37e-50 | 6 |
gland of foregut | 5.37e-50 | 6 |
oral gland | 5.37e-50 | 6 |
oral cavity | 5.37e-50 | 6 |
tongue | 1.22e-44 | 3 |
gustatory system | 1.22e-44 | 3 |
future tongue | 1.22e-44 | 3 |
oral opening | 8.52e-38 | 22 |
submandibular gland | 1.84e-34 | 1 |
submandibular gland primordium | 1.84e-34 | 1 |
parotid gland | 7.06e-34 | 1 |
cheek | 7.06e-34 | 1 |
parotid gland primordium | 7.06e-34 | 1 |
gland of gut | 2.06e-30 | 10 |
mouth | 7.63e-29 | 29 |
stomodeum | 7.63e-29 | 29 |
orifice | 2.31e-23 | 36 |
anterior region of body | 1.49e-19 | 62 |
craniocervical region | 1.49e-19 | 62 |
midface | 1.07e-17 | 2 |
throat | 1.27e-17 | 2 |
subdivision of head | 2.55e-17 | 49 |
head | 3.19e-15 | 56 |
chordate pharynx | 3.25e-14 | 10 |
pharyngeal region of foregut | 3.25e-14 | 10 |
pharynx | 5.10e-13 | 11 |
respiratory system | 1.22e-11 | 74 |
exocrine gland | 2.22e-10 | 31 |
exocrine system | 2.22e-10 | 31 |
foregut | 5.77e-10 | 87 |
surface structure | 8.34e-09 | 99 |
pharyngeal arch system | 2.42e-08 | 18 |
upper respiratory tract | 5.94e-08 | 19 |
adult organism | 1.12e-07 | 114 |
subdivision of digestive tract | 2.19e-07 | 118 |